Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4g20
         (645 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U53180-3|AAA96284.1|  727|Caenorhabditis elegans Hypothetical pr...    31   0.53 
AF098989-3|AAK18953.2|  569|Caenorhabditis elegans Hypothetical ...    31   0.70 
U70853-1|AAB09143.2|  439|Caenorhabditis elegans Hypothetical pr...    30   1.2  
AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical ...    29   2.1  
Z81513-1|CAB04174.1|  346|Caenorhabditis elegans Hypothetical pr...    29   2.8  
Z46787-9|CAA86747.1|  274|Caenorhabditis elegans Hypothetical pr...    28   6.5  
U80445-6|AAB37797.2|  575|Caenorhabditis elegans Hypothetical pr...    28   6.5  
Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical pr...    27   8.6  
U58752-4|AAB00667.1|  572|Caenorhabditis elegans Hypothetical pr...    27   8.6  
AF067609-5|AAC17534.1|  644|Caenorhabditis elegans Hypothetical ...    27   8.6  

>U53180-3|AAA96284.1|  727|Caenorhabditis elegans Hypothetical
           protein D1014.5 protein.
          Length = 727

 Score = 31.5 bits (68), Expect = 0.53
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
 Frame = +3

Query: 195 ALGMARGQLEYTINELDKAVPEKLKENLK-NITRRIDRVRKKIDMGNLVYRSKD 353
           A+  + G L+  IN  DK  PE L EN++ N+  R + +   +    LVYR+ +
Sbjct: 667 AIAESSGLLKEFINSDDKWTPENLSENIEDNVPLRGELLENILSRTKLVYRTME 720


>AF098989-3|AAK18953.2|  569|Caenorhabditis elegans Hypothetical
           protein F47G6.2 protein.
          Length = 569

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 14/23 (60%), Positives = 16/23 (69%)
 Frame = +2

Query: 38  VNDIHVLASNLPIFRYARFYIQC 106
           +ND HVLA  LPIFR A F + C
Sbjct: 256 INDKHVLACALPIFRIAIFNLIC 278


>U70853-1|AAB09143.2|  439|Caenorhabditis elegans Hypothetical
           protein M01H9.2 protein.
          Length = 439

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 19/72 (26%), Positives = 35/72 (48%), Gaps = 4/72 (5%)
 Frame = -3

Query: 589 ISQTPSDCV----VCVSIAEISSCIVQASAAFLLGIFVRASCRYCSNVNLYGFCVPIVPS 422
           +++T SDC      C  +AE  +C    S +  L ++   SC +C     Y    P++ S
Sbjct: 361 MAKTMSDCKDELETCEQLAESGACQHDFSKS-ALRLYCAKSCGFCKIPQFYFSDSPLMAS 419

Query: 421 VIGSKTLDSTSM 386
           V+ ++ L  +S+
Sbjct: 420 VVSTRKLMKSSL 431


>AL033509-1|CAA22059.1| 1494|Caenorhabditis elegans Hypothetical
           protein Y113G7C.1 protein.
          Length = 1494

 Score = 29.5 bits (63), Expect = 2.1
 Identities = 13/64 (20%), Positives = 37/64 (57%)
 Frame = +3

Query: 216 QLEYTINELDKAVPEKLKENLKNITRRIDRVRKKIDMGNLVYRSKDYEYVVKAIFENMDV 395
           Q   T+  ++K +P+ +K+N+KN+T  +++  + ++  + +  S      ++ +F  +++
Sbjct: 712 QFSATLASIEK-IPDTMKKNVKNVTLELNKWSQSLNQSDAITHSAS---ALRGVFGLLEL 767

Query: 396 LSSV 407
            SS+
Sbjct: 768 ESSI 771


>Z81513-1|CAB04174.1|  346|Caenorhabditis elegans Hypothetical
           protein F26D2.1 protein.
          Length = 346

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
 Frame = -2

Query: 401 RQYIHVFKNCFHYIFVILTSVHQIPHINFFSNAVYSSRYVL*ILFQF--FRNRFVQFIN 231
           + Y+HV+ NC  Y F + T +   P + +   A++S  Y++ I F    F  RF+ F N
Sbjct: 62  KPYLHVYNNCILY-FSLSTWISAKPLLPWLF-AIWSGMYLVVIAFISIQFIYRFMNFFN 118


>Z46787-9|CAA86747.1|  274|Caenorhabditis elegans Hypothetical
           protein C16C10.9 protein.
          Length = 274

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 17/52 (32%), Positives = 27/52 (51%), Gaps = 4/52 (7%)
 Frame = +3

Query: 168 PSKDPEWYIALGMARGQL---EYTINELDKAVPEKLKENLKNITRR-IDRVR 311
           P   P++ I   +   QL   E+T    D  V ++L+ NL+NI +R  D +R
Sbjct: 213 PPAPPQFLIKFCILMHQLGFQEWTAESFDVIVVDRLRRNLRNIDQRFFDSIR 264


>U80445-6|AAB37797.2|  575|Caenorhabditis elegans Hypothetical
           protein C50F2.1 protein.
          Length = 575

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 14/52 (26%), Positives = 29/52 (55%)
 Frame = +3

Query: 258 EKLKENLKNITRRIDRVRKKIDMGNLVYRSKDYEYVVKAIFENMDVLSSVLE 413
           EK+  N +NITR ++ +R   D+ N+ Y     + + K ++ + +   S++E
Sbjct: 339 EKMANNRRNITRLLEILRCGNDLKNMDYCISATKVLYKMVWTSANARLSMIE 390


>Z81541-1|CAB04411.1| 1291|Caenorhabditis elegans Hypothetical
           protein F48F5.1 protein.
          Length = 1291

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/54 (20%), Positives = 32/54 (59%)
 Frame = +3

Query: 246 KAVPEKLKENLKNITRRIDRVRKKIDMGNLVYRSKDYEYVVKAIFENMDVLSSV 407
           K +P+ +K+N+KN+T  +++  + ++  + +  S      ++++F  + + SS+
Sbjct: 522 KKIPDAMKKNVKNVTLELNKRSESLNQSDAISHSAS---ALRSVFGLVKLESSI 572


>U58752-4|AAB00667.1|  572|Caenorhabditis elegans Hypothetical
           protein B0218.1a protein.
          Length = 572

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 11/20 (55%), Positives = 13/20 (65%)
 Frame = -1

Query: 381 QKLLSLHIRNPYFGTPNSPY 322
           Q LLS +  NP FGT  +PY
Sbjct: 186 QSLLSYNCSNPLFGTTTNPY 205


>AF067609-5|AAC17534.1|  644|Caenorhabditis elegans Hypothetical
           protein C23H5.7 protein.
          Length = 644

 Score = 27.5 bits (58), Expect = 8.6
 Identities = 19/79 (24%), Positives = 36/79 (45%), Gaps = 1/79 (1%)
 Frame = +3

Query: 6   EYKMQVKYIALLTIFTCSQAIYPYFDTQDFIYNVPKVYRISIVLDKLLDYYERKPSKDPE 185
           EY M + Y + LTI TC Q  +P   +Q+ +     +  + +    +  +   +    P+
Sbjct: 275 EYSMSI-YWSALTITTCGQQPWPSTSSQNSLEVFDTLIGVLVFATIIGSWLPTQHKNSPK 333

Query: 186 WYIA-LGMARGQLEYTINE 239
             I+ +G    Q+  T+NE
Sbjct: 334 SEISGVGSVVTQMSQTVNE 352


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,192,923
Number of Sequences: 27780
Number of extensions: 328789
Number of successful extensions: 1114
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1070
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1114
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)