Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4g19
         (695 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC084153-4|AAK84598.2|  836|Caenorhabditis elegans Hypothetical ...    36   0.021
U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical pr...    32   0.34 
AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribo...    32   0.34 
AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribo...    32   0.34 
AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribo...    32   0.34 
AC006617-1|AAF39770.2|  397|Caenorhabditis elegans Hypothetical ...    32   0.45 
U29378-4|AAA68727.2|  667|Caenorhabditis elegans Temporarily ass...    30   1.4  
Z78417-10|CAB01688.2|  745|Caenorhabditis elegans Hypothetical p...    30   1.8  
Z81583-2|CAB04670.1|  314|Caenorhabditis elegans Hypothetical pr...    29   2.4  
Z81483-3|CAB03961.1|  152|Caenorhabditis elegans Hypothetical pr...    29   4.2  
Z47069-1|CAA87338.1|  964|Caenorhabditis elegans Hypothetical pr...    29   4.2  
AL021492-3|CAA16382.3|  893|Caenorhabditis elegans Hypothetical ...    28   5.5  
AF003740-7|AAC48142.2|  625|Caenorhabditis elegans Hypothetical ...    28   5.5  
Z74032-8|CAA98462.3|  325|Caenorhabditis elegans Hypothetical pr...    28   7.3  

>AC084153-4|AAK84598.2|  836|Caenorhabditis elegans Hypothetical
           protein Y22D7AL.9 protein.
          Length = 836

 Score = 36.3 bits (80), Expect = 0.021
 Identities = 24/75 (32%), Positives = 39/75 (52%), Gaps = 1/75 (1%)
 Frame = +3

Query: 375 TKIHMLDNPKKKSKMWISIAE-ELKSLNVEVTADQVRWKINALTKKYKDCIDNGQGAVSF 551
           T   +  N +KK +M I +A  EL+  N E+    V   IN      +DC +N + A+S 
Sbjct: 640 TIFKLASNNEKKVEMLILLARAELERNNTEIALSAVEKSINLA----EDCENNEKLAISC 695

Query: 552 KYFNEMHQILGRYND 596
           +   E++Q +G +ND
Sbjct: 696 RLIAEIYQKIGGFND 710


>U97015-6|AAB52345.2| 1064|Caenorhabditis elegans Hypothetical
           protein F48C1.1 protein.
          Length = 1064

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 25/108 (23%), Positives = 51/108 (47%), Gaps = 1/108 (0%)
 Frame = +3

Query: 249 PVPTYNHNQNISQQEESDVNEMNKQNIIWTKNSTIMLLNLYETKIHMLDNPKKKSKMWIS 428
           P P    N N++ + E  VN++ K + ++ K   I++++  + +  M++   ++   +I 
Sbjct: 353 PKPEKITNANVAAKAEKLVNQLEKMSEMY-KAPVILMMHGDDFRFDMIEEWNQQHDNFIP 411

Query: 429 IAEEL-KSLNVEVTADQVRWKINALTKKYKDCIDNGQGAVSFKYFNEM 569
           + +E+ K   VE+         N L K Y +  D+    VS  +F  M
Sbjct: 412 VFDEINKGSRVEIRFGTFTDYFNDLEKWYSNNKDSEPPTVSGDFFPYM 459


>AF548287-1|AAN40683.1| 2238|Caenorhabditis elegans poly ADP-ribose
           metabolism enzyme-5 protein.
          Length = 2238

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = +3

Query: 342 NSTIMLLNLYETKIHMLDNPKKKSKMWISIAEELKSLNVEVTADQVRWKINALTKKYKDC 521
           N  +ML NL   K+    N  +K     +   E+ +L ++V  DQV WK   LTK   D 
Sbjct: 740 NGNLMLFNLMLDKVANKRNLFEKWANHQNFLHEILALPMKVYGDQVLWKGETLTKPAYDV 799

Query: 522 I 524
           +
Sbjct: 800 L 800


>AF047664-2|AAC04454.2| 2276|Caenorhabditis elegans Poly(adp-ribose)
           metabolism enzymeprotein 5, isoform a protein.
          Length = 2276

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = +3

Query: 342 NSTIMLLNLYETKIHMLDNPKKKSKMWISIAEELKSLNVEVTADQVRWKINALTKKYKDC 521
           N  +ML NL   K+    N  +K     +   E+ +L ++V  DQV WK   LTK   D 
Sbjct: 740 NGNLMLFNLMLDKVANKRNLFEKWANHQNFLHEILALPMKVYGDQVLWKGETLTKPAYDV 799

Query: 522 I 524
           +
Sbjct: 800 L 800


>AF047664-1|AAO12392.1| 2238|Caenorhabditis elegans Poly(adp-ribose)
           metabolism enzymeprotein 5, isoform b protein.
          Length = 2238

 Score = 32.3 bits (70), Expect = 0.34
 Identities = 20/61 (32%), Positives = 29/61 (47%)
 Frame = +3

Query: 342 NSTIMLLNLYETKIHMLDNPKKKSKMWISIAEELKSLNVEVTADQVRWKINALTKKYKDC 521
           N  +ML NL   K+    N  +K     +   E+ +L ++V  DQV WK   LTK   D 
Sbjct: 740 NGNLMLFNLMLDKVANKRNLFEKWANHQNFLHEILALPMKVYGDQVLWKGETLTKPAYDV 799

Query: 522 I 524
           +
Sbjct: 800 L 800


>AC006617-1|AAF39770.2|  397|Caenorhabditis elegans Hypothetical
           protein C39B5.6 protein.
          Length = 397

 Score = 31.9 bits (69), Expect = 0.45
 Identities = 16/45 (35%), Positives = 26/45 (57%)
 Frame = +1

Query: 514 KTALTMDKEQYLLSILMRCTKY*AATTIMVEIIDWLLVLYXKTQR 648
           ++A+ + +E  LLS + RC +Y A T   V+I+ W+  L    QR
Sbjct: 230 RSAVHIAEEPELLSFVKRCIRYKAPTVTPVDILYWMKELKTVMQR 274


>U29378-4|AAA68727.2|  667|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 197 protein.
          Length = 667

 Score = 30.3 bits (65), Expect = 1.4
 Identities = 18/89 (20%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
 Frame = +3

Query: 339 KNSTIMLLNLYETKIHMLDNPKKKSKMWISIAEELKSLNV-EVTADQVRWKINALTKKYK 515
           KN  + L+N Y+  + ++DN + K     +I  EL+  ++ +   + +   I  + K   
Sbjct: 502 KNKHVFLINNYDLILSIIDNEESKHTKIYAIVHELEQKSIDDFVEEMLEPHIGYMIKFVN 561

Query: 516 DC---IDNGQGAVSFKYFNEMHQILGRYN 593
           +C   I  G   +  +Y +++  ++  +N
Sbjct: 562 ECESLIVQGHTQLLVRYNDKVGTVVANFN 590


>Z78417-10|CAB01688.2|  745|Caenorhabditis elegans Hypothetical
           protein C35C5.2 protein.
          Length = 745

 Score = 29.9 bits (64), Expect = 1.8
 Identities = 18/66 (27%), Positives = 29/66 (43%)
 Frame = +3

Query: 312 MNKQNIIWTKNSTIMLLNLYETKIHMLDNPKKKSKMWISIAEELKSLNVEVTADQVRWKI 491
           M    ++    ST+ L  +    IH       K    +SIA  +K L   +  D +R  +
Sbjct: 1   MKASGVVLVAVSTVALTIILSNAIHQSYKSNSKPLPKLSIATNIKQL---INVDNIRSNL 57

Query: 492 NALTKK 509
           ++LTKK
Sbjct: 58  HSLTKK 63


>Z81583-2|CAB04670.1|  314|Caenorhabditis elegans Hypothetical
           protein T02G6.2 protein.
          Length = 314

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 16/46 (34%), Positives = 26/46 (56%), Gaps = 3/46 (6%)
 Frame = +3

Query: 282 SQQEESDVNEMN---KQNIIWTKNSTIMLLNLYETKIHMLDNPKKK 410
           S QE++DVNE+    +  I + K + + + NLY  ++     PKKK
Sbjct: 268 SLQEQADVNEVLEIIRNQIFYLKYNFLKISNLYSQQMRSNAEPKKK 313


>Z81483-3|CAB03961.1|  152|Caenorhabditis elegans Hypothetical
           protein C43D7.5 protein.
          Length = 152

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 16/50 (32%), Positives = 22/50 (44%)
 Frame = +3

Query: 177 ENIHNNVAVLAILDSQPNLYKPNMPVPTYNHNQNISQQEESDVNEMNKQN 326
           +N  N       +D + N         T N N N + QEE DVN M ++N
Sbjct: 17  DNCDNTNTYSHTVDRKDNFDNTTTNTKTVNRNDNCNNQEEGDVN-MYRRN 65


>Z47069-1|CAA87338.1|  964|Caenorhabditis elegans Hypothetical protein
            F36G3.1 protein.
          Length = 964

 Score = 28.7 bits (61), Expect = 4.2
 Identities = 19/70 (27%), Positives = 34/70 (48%), Gaps = 2/70 (2%)
 Frame = +3

Query: 222  QPNLYK-PNMPVPTY-NHNQNISQQEESDVNEMNKQNIIWTKNSTIMLLNLYETKIHMLD 395
            +  LYK  NM    + +    +S + E    E+NKQ +I  + S   L + ++ K+  L+
Sbjct: 794  EATLYKMKNMERDRFLSREAQMSMEIEDLQRELNKQKLILNQTSMAKLADTFDRKVLHLE 853

Query: 396  NPKKKSKMWI 425
            N  ++  M I
Sbjct: 854  NELRERDMLI 863


>AL021492-3|CAA16382.3|  893|Caenorhabditis elegans Hypothetical
           protein Y45F10D.7 protein.
          Length = 893

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 20/81 (24%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
 Frame = +3

Query: 273 QNISQQEESDVNEM-NKQNIIWTKNSTIMLLNLYETKIHMLDNPKKKSKMWISIAE-ELK 446
           +NI  + + D   + +K+N++  ++S   LL   +T+ H+LD  K    M +S  + +++
Sbjct: 742 ENIGDEMDGDSRYITSKRNLLELESSFTTLLRNAKTRDHLLDAFKTLQNMSLSAIDFQIR 801

Query: 447 SLNVEVTADQVRWKINALTKK 509
           +LN +      R  +  L  K
Sbjct: 802 TLNPKTIPIFFRMLLEVLKTK 822


>AF003740-7|AAC48142.2|  625|Caenorhabditis elegans Hypothetical
           protein C41D11.7 protein.
          Length = 625

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 3/58 (5%)
 Frame = +3

Query: 531 GQGAVSFKYFNEMHQILG---RYNDNGGNYRLASGVIXEDAEKSKDRKNLMKTTTPFR 695
           GQ   SF  ++   +++    R+N+NG +YR    +  E  E+++  K + K    ++
Sbjct: 549 GQDLESFMNYSNDEEMINWCKRFNENGPDYRAKKALAWEKREETRLMKTISKVKYEYK 606


>Z74032-8|CAA98462.3|  325|Caenorhabditis elegans Hypothetical
           protein F35B12.1 protein.
          Length = 325

 Score = 27.9 bits (59), Expect = 7.3
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -2

Query: 418 IFDFFLGLSNICILVSYKFSNIIVEFFVQMIFCLFISFTSDSSCW 284
           IFDF +      ++  Y+F  II+EFF  +    ++ +TS    W
Sbjct: 126 IFDFKITFLITLLMFIYRFVKIILEFFHYIPLECWMVYTSYDLAW 170


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,182,382
Number of Sequences: 27780
Number of extensions: 318751
Number of successful extensions: 985
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 946
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 985
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1602927856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)