Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4g13
         (510 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.     24   1.1  
M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee preprosec...    21   7.4  
DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor pro...    21   7.4  
DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor pro...    21   7.4  
AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.      21   7.4  
AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled rec...    21   7.4  

>AY268030-1|AAP23055.1|  602|Apis mellifera dorsal protein protein.
          Length = 602

 Score = 23.8 bits (49), Expect = 1.1
 Identities = 9/33 (27%), Positives = 17/33 (51%)
 Frame = +3

Query: 129 IKNKPKPQCATGTAASSQELEKDNNLLCAFRNL 227
           I +  KP+ + G  A    +E+ NN+  +F  +
Sbjct: 548 ISDSTKPETSKGINAEPSNIEESNNMTDSFTRI 580


>M12598-1|AAA27733.1|   77|Apis mellifera protein ( Bee
           preprosecapin mRNA, complete cds. ).
          Length = 77

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 330 YLITFVLISFVILIYFV 380
           +LIT +L SFV+++  +
Sbjct: 10  HLITVLLFSFVVILLII 26


>DQ863218-1|ABI94394.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -1

Query: 204 DCCPSPTLAMMLLFLSH 154
           DCCPS  +   + +L +
Sbjct: 355 DCCPSDRMVYFITWLGY 371


>DQ863217-1|ABI94393.1|  399|Apis mellifera tyramine receptor
           protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -1

Query: 204 DCCPSPTLAMMLLFLSH 154
           DCCPS  +   + +L +
Sbjct: 355 DCCPSDRMVYFITWLGY 371


>AY082691-1|AAL92482.1|   77|Apis mellifera preprosecapin protein.
          Length = 77

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 7/17 (41%), Positives = 13/17 (76%)
 Frame = +3

Query: 330 YLITFVLISFVILIYFV 380
           +LIT +L SFV+++  +
Sbjct: 10  HLITVLLFSFVVILLII 26


>AJ245824-1|CAB76374.1|  399|Apis mellifera G-protein coupled
           receptor protein.
          Length = 399

 Score = 21.0 bits (42), Expect = 7.4
 Identities = 6/17 (35%), Positives = 10/17 (58%)
 Frame = -1

Query: 204 DCCPSPTLAMMLLFLSH 154
           DCCPS  +   + +L +
Sbjct: 355 DCCPSDRMVYFITWLGY 371


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 123,208
Number of Sequences: 438
Number of extensions: 2447
Number of successful extensions: 6
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 146,343
effective HSP length: 54
effective length of database: 122,691
effective search space used: 14109465
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)