Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4g02
         (709 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    28   0.25 
AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/T...    26   1.3  
AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/T...    24   4.1  

>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
           chain protein.
          Length = 1024

 Score = 28.3 bits (60), Expect = 0.25
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +3

Query: 27  GRTSYEVPAPRGRAGYVGLDDLQGVXPGAQGILG 128
           G   Y  P P+G  G +GL  + G+ PG  G+ G
Sbjct: 344 GVPGYGRPGPQGEKGDIGLTGVNGL-PGLNGVKG 376


>AJ441131-7|CAD29636.1| 1977|Anopheles gambiae putative Tyr/Ser/Thr
            phosphatase protein.
          Length = 1977

 Score = 25.8 bits (54), Expect = 1.3
 Identities = 17/72 (23%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
 Frame = -3

Query: 410  PVIRTTTIDKQHCSSTTSETKLIGAYAGAGLVPAAT-NIRANSVQTFXEEQQNAHNTELL 234
            P+  ++T    + + +      + A A A L+P AT N+R +   T           +  
Sbjct: 804  PLSSSSTSSSLYPNGSIGGVNSLAAAAAATLIPTATTNVRPSFTTTSISNGATTLQQQHA 863

Query: 233  GSQVNAGYRGNP 198
            GS+    YR  P
Sbjct: 864  GSEAGHPYRFQP 875


>AJ439398-6|CAD28129.1| 1978|Anopheles gambiae putative Tyr/Ser/Thr
           phosphatase protein.
          Length = 1978

 Score = 24.2 bits (50), Expect = 4.1
 Identities = 15/50 (30%), Positives = 21/50 (42%), Gaps = 1/50 (2%)
 Frame = -3

Query: 344 IGAYAGAGLVPAAT-NIRANSVQTFXEEQQNAHNTELLGSQVNAGYRGNP 198
           + A A A L+P AT N+R +   T           +  GS+    YR  P
Sbjct: 825 LAAAAAATLIPTATTNVRPSFTTTSISNGATTLQQQHAGSEAGHPYRFQP 874


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 693,911
Number of Sequences: 2352
Number of extensions: 13289
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 72340815
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)