Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4g01
(305 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering compo... 27 0.82
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 1.1
SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|ch... 26 1.1
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 25 1.9
SPCC553.02 |||glutamine-dependent NAD|Schizosaccharomyces pombe|... 25 1.9
SPBC23E6.09 |ssn6||transcriptional corepressor Ssn6|Schizosaccha... 25 1.9
SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr 3||... 25 2.5
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 25 3.3
SPAC343.11c |msc1||multi-copy suppressor of Chk1 |Schizosaccharo... 25 3.3
SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 24 4.4
SPBC211.03c |||guanyl-nucleotide exchange factor|Schizosaccharom... 24 4.4
SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2 ... 24 4.4
SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces pomb... 24 5.8
SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces p... 24 5.8
SPCC61.04c |||Rab GTPase binding|Schizosaccharomyces pombe|chr 3... 24 5.8
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 23 7.7
SPBC2F12.05c |||sterol binding ankyrin repeat protein|Schizosacc... 23 7.7
SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyce... 23 7.7
SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr 2|||Ma... 23 7.7
SPCC736.14 |dis1||microtubule-associated protein Dis1 |Schizosac... 23 7.7
>SPAC17G6.08 |pep7|vac1|prevacuole/endosomal FYVE tethering
component Pep7 |Schizosaccharomyces pombe|chr 1|||Manual
Length = 536
Score = 26.6 bits (56), Expect = 0.82
Identities = 19/56 (33%), Positives = 26/56 (46%), Gaps = 1/56 (1%)
Frame = -3
Query: 249 HKSQIRMPTEPVQTVLPPLNASPMSRRTRTWSRSPYAANGPASPVYG-DASVLPDS 85
HK Q + + +T L +A M R W PY NG +S G +A+ L DS
Sbjct: 70 HKRQDSINSWLTRT-LNGASALQMKAAQRLWRMEPYEQNGDSSGAVGLEATKLTDS 124
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 26.2 bits (55), Expect = 1.1
Identities = 15/37 (40%), Positives = 19/37 (51%)
Frame = -3
Query: 228 PTEPVQTVLPPLNASPMSRRTRTWSRSPYAANGPASP 118
P P Q PP NAS +R T T S ++ + P SP
Sbjct: 276 PATPSQPPRPPTNAS--TRSTGTSSSMAHSYDSPPSP 310
>SPCC188.13c |dcr1|SPCC584.10c|dicer|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1374
Score = 26.2 bits (55), Expect = 1.1
Identities = 11/29 (37%), Positives = 17/29 (58%)
Frame = -3
Query: 159 WSRSPYAANGPASPVYGDASVLPDSSFSL 73
W + Y+ NGP PV+ D++ + D F L
Sbjct: 321 WKNNKYSDNGPRIPVF-DSTDVTDKVFKL 348
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 25.4 bits (53), Expect = 1.9
Identities = 11/22 (50%), Positives = 14/22 (63%)
Frame = -3
Query: 183 PMSRRTRTWSRSPYAANGPASP 118
P+SRR + SRS GP+SP
Sbjct: 576 PVSRRPSSTSRSSVKITGPSSP 597
>SPCC553.02 |||glutamine-dependent NAD|Schizosaccharomyces pombe|chr
3|||Manual
Length = 700
Score = 25.4 bits (53), Expect = 1.9
Identities = 11/32 (34%), Positives = 17/32 (53%)
Frame = -3
Query: 294 YFNILIIFSVQSKLQHKSQIRMPTEPVQTVLP 199
Y I + FS+ S Q R PT+P++ +P
Sbjct: 297 YERIHVNFSLSSYQQDYDIYRKPTDPIEVTIP 328
>SPBC23E6.09 |ssn6||transcriptional corepressor
Ssn6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1102
Score = 25.4 bits (53), Expect = 1.9
Identities = 12/31 (38%), Positives = 16/31 (51%)
Frame = -1
Query: 167 PAPGRAVRTPPTVPRLPSTGTPACCLTAVSL 75
PAP +A P LP+ GTP + V+L
Sbjct: 244 PAPNQAALPPIPPQALPANGTPNTLASPVTL 274
>SPCC1450.09c |||phospholipase |Schizosaccharomyces pombe|chr
3|||Manual
Length = 633
Score = 25.0 bits (52), Expect = 2.5
Identities = 11/33 (33%), Positives = 19/33 (57%)
Frame = -3
Query: 198 PLNASPMSRRTRTWSRSPYAANGPASPVYGDAS 100
P N+ P+S+R+ + S +PY P+ + AS
Sbjct: 46 PANSIPLSKRSTSPSYAPYTVACPSGSLLRPAS 78
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 24.6 bits (51), Expect = 3.3
Identities = 9/20 (45%), Positives = 12/20 (60%)
Frame = -1
Query: 161 PGRAVRTPPTVPRLPSTGTP 102
P V++PP+ P LPS P
Sbjct: 177 PAAPVKSPPSAPSLPSAVPP 196
>SPAC343.11c |msc1||multi-copy suppressor of Chk1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1588
Score = 24.6 bits (51), Expect = 3.3
Identities = 12/24 (50%), Positives = 14/24 (58%)
Frame = -3
Query: 225 TEPVQTVLPPLNASPMSRRTRTWS 154
T P T PP +A SRRTR+ S
Sbjct: 387 TLPSNTKTPPASARQSSRRTRSTS 410
>SPBP8B7.26 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 262
Score = 24.2 bits (50), Expect = 4.4
Identities = 9/14 (64%), Positives = 10/14 (71%)
Frame = -1
Query: 140 PPTVPRLPSTGTPA 99
PP P LPS GTP+
Sbjct: 108 PPKEPALPSRGTPS 121
>SPBC211.03c |||guanyl-nucleotide exchange
factor|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1462
Score = 24.2 bits (50), Expect = 4.4
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = -1
Query: 161 PGRAVRTPPTVPRLPSTGTPACCLTAVS 78
PG+AV + ++ + TG CC + +S
Sbjct: 188 PGKAVLSDDSICEIVETGLSMCCQSRLS 215
>SPCC24B10.08c |||histone acetyltransferase complex subunit Ada2
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 437
Score = 24.2 bits (50), Expect = 4.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Frame = -1
Query: 152 AVRTPPTVPRLPSTGTPAC 96
A + PP +P+ P TP C
Sbjct: 142 AFQPPPIIPQKPLASTPQC 160
>SPAC1687.09 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1379
Score = 23.8 bits (49), Expect = 5.8
Identities = 19/68 (27%), Positives = 33/68 (48%), Gaps = 2/68 (2%)
Frame = -3
Query: 261 SKLQHKSQIRMPTEPVQTVLPPLNASPMSRRTRTWS--RSPYAANGPASPVYGDASVLPD 88
SKL +SQ EP+ + +P N PMS + R + ++ A + +P+ + + D
Sbjct: 331 SKLAIESQPFKSAEPLSSAIPLPN--PMSEKMRNGASKQAIMAQSSKINPLPPLTASISD 388
Query: 87 SSFSLTRN 64
SF +N
Sbjct: 389 PSFEKLKN 396
>SPBC31F10.13c |hip1|hir1|hira protein Hip1|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 932
Score = 23.8 bits (49), Expect = 5.8
Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 8/41 (19%)
Frame = -3
Query: 213 QTVLPPLNASPMSR--RTRTWS------RSPYAANGPASPV 115
+T+ P N SP+S R +WS +P A NGP S V
Sbjct: 212 KTITGPFNNSPLSTYFRRPSWSPDGKHIAAPNAMNGPVSCV 252
>SPCC61.04c |||Rab GTPase binding|Schizosaccharomyces pombe|chr
3|||Manual
Length = 227
Score = 23.8 bits (49), Expect = 5.8
Identities = 11/28 (39%), Positives = 15/28 (53%)
Frame = -3
Query: 135 NGPASPVYGDASVLPDSSFSLTRNQSGF 52
N PA+ Y D S D+SF+ +GF
Sbjct: 5 NNPANLQYYDYSYTADNSFNTQSRAAGF 32
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 23.4 bits (48), Expect = 7.7
Identities = 17/59 (28%), Positives = 26/59 (44%), Gaps = 2/59 (3%)
Frame = -3
Query: 261 SKLQHKSQIRMPTEPVQTVLPPLNASPMSRRTRTWSRSPY--AANGPASPVYGDASVLP 91
+ + H+S P EPVQ N +P + + S SP N SP+ +A+ P
Sbjct: 1552 NSMPHRSSPYAPQEPVQKPQAINNIAPATNLGTSQSFSPRMGPVNNSGSPLAMNAAGQP 1610
>SPBC2F12.05c |||sterol binding ankyrin repeat
protein|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1310
Score = 23.4 bits (48), Expect = 7.7
Identities = 12/35 (34%), Positives = 17/35 (48%)
Frame = -3
Query: 270 SVQSKLQHKSQIRMPTEPVQTVLPPLNASPMSRRT 166
S+QS + + +PV P NAS +SR T
Sbjct: 815 SIQSDVSAPKAKEVSEKPVSHQAKPSNASQLSRNT 849
>SPBC530.04 |mod5||Tea1 anchoring protein Mod5|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 522
Score = 23.4 bits (48), Expect = 7.7
Identities = 13/44 (29%), Positives = 21/44 (47%)
Frame = -3
Query: 246 KSQIRMPTEPVQTVLPPLNASPMSRRTRTWSRSPYAANGPASPV 115
K ++ P+Q PP N +P S + +R P + +SPV
Sbjct: 242 KLNVKNSAWPLQPYSPPANETPASSSSSAKAR-PVSVPDMSSPV 284
>SPBC359.04c |||DIPSY family|Schizosaccharomyces pombe|chr
2|||Manual
Length = 358
Score = 23.4 bits (48), Expect = 7.7
Identities = 10/22 (45%), Positives = 14/22 (63%)
Frame = -3
Query: 120 PVYGDASVLPDSSFSLTRNQSG 55
PVY + PDSSF + +N +G
Sbjct: 285 PVYTIYTDDPDSSFDIIKNNNG 306
>SPCC736.14 |dis1||microtubule-associated protein Dis1
|Schizosaccharomyces pombe|chr 3|||Manual
Length = 882
Score = 23.4 bits (48), Expect = 7.7
Identities = 12/39 (30%), Positives = 19/39 (48%)
Frame = -1
Query: 173 VEPAPGRAVRTPPTVPRLPSTGTPACCLTAVSLSRETNP 57
++ +P + TP LPS+ LT SLS ++P
Sbjct: 553 LKTSPVKLAVTPQAPSPLPSSNPSQASLTEESLSTRSSP 591
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 908,769
Number of Sequences: 5004
Number of extensions: 14012
Number of successful extensions: 76
Number of sequences better than 10.0: 20
Number of HSP's better than 10.0 without gapping: 72
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 76
length of database: 2,362,478
effective HSP length: 63
effective length of database: 2,047,226
effective search space used: 77794588
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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