Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4f24
         (714 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.           23   1.9  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    23   2.5  
AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory recept...    23   2.5  
AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory recept...    23   2.5  
AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory recept...    23   2.5  
DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory pro...    23   3.3  

>U09586-1|AAC47270.1|  425|Tribolium castaneum ORF 1 protein.
          Length = 425

 Score = 23.4 bits (48), Expect = 1.9
 Identities = 13/28 (46%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = +2

Query: 446 LTGDVLLDEALKHMKDTDPPETVQS-WI 526
           L+ +VLLDE L+H      PE +QS W+
Sbjct: 260 LSEEVLLDELLRHF-----PERIQSLWV 282


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 14/47 (29%), Positives = 21/47 (44%), Gaps = 4/47 (8%)
 Frame = -1

Query: 651 RKFCFSVVKTPFSTRFLANLSRTFFNWYFSFIGFH----VSPLRYSI 523
           R   F ++  P  + F       +   YFS I FH    V+P+ Y+I
Sbjct: 309 RALTFWIIVAPAGSNFEIGFENYYNILYFSRIMFHINSAVNPILYNI 355


>AM292351-1|CAL23163.2|  394|Tribolium castaneum gustatory receptor
           candidate 30 protein.
          Length = 394

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -1

Query: 669 VVMSNKRKFCFSVVKTPFSTRFLAN-LSRTFFNWYFSFI 556
           V+MS      F +++   S R + N L R +F W F F+
Sbjct: 291 VLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGFL 329


>AM292350-1|CAL23162.2|  429|Tribolium castaneum gustatory receptor
           candidate 29 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -1

Query: 669 VVMSNKRKFCFSVVKTPFSTRFLAN-LSRTFFNWYFSFI 556
           V+MS      F +++   S R + N L R +F W F F+
Sbjct: 291 VLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGFL 329


>AM292328-1|CAL23140.2|  429|Tribolium castaneum gustatory receptor
           candidate 7 protein.
          Length = 429

 Score = 23.0 bits (47), Expect = 2.5
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)
 Frame = -1

Query: 669 VVMSNKRKFCFSVVKTPFSTRFLAN-LSRTFFNWYFSFI 556
           V+MS      F +++   S R + N L R +F W F F+
Sbjct: 291 VLMSFASDLLFILIQLFNSLRQMKNNLERIYFYWSFGFL 329


>DQ855496-1|ABH88183.1|  129|Tribolium castaneum chemosensory
           protein 10 protein.
          Length = 129

 Score = 22.6 bits (46), Expect = 3.3
 Identities = 8/24 (33%), Positives = 14/24 (58%)
 Frame = +2

Query: 548 WNPMKLKYQLKNVRERLAKNLVEK 619
           WN ++ KY    V  +  K+++EK
Sbjct: 101 WNELEAKYDKDGVYRQKYKDVIEK 124


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 139,832
Number of Sequences: 336
Number of extensions: 2831
Number of successful extensions: 7
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18947110
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)