Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4f20
         (442 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein p...    25   1.6  
AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless female-s...    23   4.8  
AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless male-spe...    23   4.8  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   8.4  

>AB090814-1|BAC57903.1|  499|Anopheles gambiae gag-like protein
           protein.
          Length = 499

 Score = 24.6 bits (51), Expect = 1.6
 Identities = 16/61 (26%), Positives = 25/61 (40%)
 Frame = +1

Query: 40  KSGFADAVSKVFSDLKVGNLQHFYENRVVRYHARLKKRSQDLREQCEAMSVRDITPQLKL 219
           + GF  + SK+   L V    H Y       HA +KK S  +      +    +T +L+ 
Sbjct: 103 EQGFEVSASKLQEALMVARELHTYTKDRNNVHAPIKKMSVSILSALSCIERELLTMKLRA 162

Query: 220 E 222
           E
Sbjct: 163 E 163


>AY725820-1|AAU50568.1|  593|Anopheles gambiae fruitless
           female-specific zinc-fingerC isoform protein.
          Length = 593

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 232 ELHFPAALDGAFTPSLEPG 288
           +LH   +    FTPS EPG
Sbjct: 506 QLHHQMSYHNMFTPSREPG 524


>AY725819-1|AAU50567.1|  569|Anopheles gambiae fruitless
           male-specific zinc-fingerC isoform protein.
          Length = 569

 Score = 23.0 bits (47), Expect = 4.8
 Identities = 9/19 (47%), Positives = 11/19 (57%)
 Frame = +1

Query: 232 ELHFPAALDGAFTPSLEPG 288
           +LH   +    FTPS EPG
Sbjct: 482 QLHHQMSYHNMFTPSREPG 500


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.2 bits (45), Expect = 8.4
 Identities = 8/24 (33%), Positives = 11/24 (45%)
 Frame = -1

Query: 121  HDFHKNVASFRLLNLKKLWTQHRQ 50
            H FHK +        KK+W   R+
Sbjct: 2309 HTFHKEIKGIDEAKSKKIWDALRE 2332


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.315    0.130    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 405,998
Number of Sequences: 2352
Number of extensions: 6597
Number of successful extensions: 17
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)