Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4f20
         (442 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY051679-1|AAK93103.1|  424|Drosophila melanogaster LD22902p pro...    29   3.7  
AF152245-1|AAD38047.1|  424|Drosophila melanogaster MRG15 protein.     29   3.7  
AE014297-1988|AAF55161.1|  424|Drosophila melanogaster CG6363-PA...    29   3.7  
AE014297-4753|AAF57158.3|  774|Drosophila melanogaster CG12063-P...    28   4.9  

>AY051679-1|AAK93103.1|  424|Drosophila melanogaster LD22902p
           protein.
          Length = 424

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 112 ENRVVRYHARLKKRSQDLREQCEAMSVRD 198
           ENRV++Y+    KR Q+L  QC   S +D
Sbjct: 70  ENRVLKYNDDNVKRRQELARQCGERSKKD 98


>AF152245-1|AAD38047.1|  424|Drosophila melanogaster MRG15 protein.
          Length = 424

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 112 ENRVVRYHARLKKRSQDLREQCEAMSVRD 198
           ENRV++Y+    KR Q+L  QC   S +D
Sbjct: 70  ENRVLKYNDDNVKRRQELARQCGERSKKD 98


>AE014297-1988|AAF55161.1|  424|Drosophila melanogaster CG6363-PA
           protein.
          Length = 424

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 13/29 (44%), Positives = 18/29 (62%)
 Frame = +1

Query: 112 ENRVVRYHARLKKRSQDLREQCEAMSVRD 198
           ENRV++Y+    KR Q+L  QC   S +D
Sbjct: 70  ENRVLKYNDDNVKRRQELARQCGERSKKD 98


>AE014297-4753|AAF57158.3|  774|Drosophila melanogaster CG12063-PA
           protein.
          Length = 774

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 12/37 (32%), Positives = 18/37 (48%)
 Frame = +3

Query: 246 CSP*WCLHSVTRTRIPDASQFRTGTASRTGFIGCCSG 356
           CS  WC+  V   R+P+ ++     A+R   I  C G
Sbjct: 229 CSKAWCIDRVQGYRLPERAKASQSVATRRDCIELCLG 265


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.315    0.130    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,094,522
Number of Sequences: 53049
Number of extensions: 294453
Number of successful extensions: 905
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 902
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 905
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)