Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4f20
         (442 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical pr...    29   2.0  
Z99281-5|CAB54457.1|  553|Caenorhabditis elegans Hypothetical pr...    29   2.0  
AF025461-8|AAB71000.1|  286|Caenorhabditis elegans Hypothetical ...    29   2.0  
U53151-4|AAB37066.1|  335|Caenorhabditis elegans Hypothetical pr...    28   2.6  
AL031621-1|CAA20933.1|  279|Caenorhabditis elegans Hypothetical ...    28   2.6  
Z69634-9|CAO82013.1|  575|Caenorhabditis elegans Hypothetical pr...    27   4.6  
Z69634-8|CAA93452.4|  591|Caenorhabditis elegans Hypothetical pr...    27   4.6  
AL021171-5|CAE17871.1|  688|Caenorhabditis elegans Hypothetical ...    27   4.6  
U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical p...    27   6.0  
Z49128-4|CAA88954.1|  541|Caenorhabditis elegans Hypothetical pr...    27   8.0  
U97405-9|AAB53012.2|  266|Caenorhabditis elegans C-term of hsp70...    27   8.0  
U41278-4|AAK31513.3|  928|Caenorhabditis elegans Hypothetical pr...    27   8.0  
AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical ...    27   8.0  
AF303269-1|AAG50227.1|  266|Caenorhabditis elegans Hsp70-interac...    27   8.0  
AC024791-31|AAF60655.1|  181|Caenorhabditis elegans Hypothetical...    27   8.0  

>Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9b protein.
          Length = 625

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = +1

Query: 58  AVSKVFSDLKVGNLQHFYENRVVRYHARLKKRSQDLREQCEAMSVRDITPQLKL-EEVPE 234
           A S+   D+   + + F E   V+ +   +KR ++L +  +   VR+  P+  + EE+P+
Sbjct: 234 AHSRKSDDVDSFDDESFDEKSRVKDNEARQKRRRELSDD-DRKDVRETQPKKSVKEELPQ 292

Query: 235 LHFPAALDGAFTPSLEP 285
           +  P   + A +PS  P
Sbjct: 293 IPLPPKTEAAASPSPAP 309


>Z99281-5|CAB54457.1|  553|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9a protein.
          Length = 553

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 20/77 (25%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = +1

Query: 58  AVSKVFSDLKVGNLQHFYENRVVRYHARLKKRSQDLREQCEAMSVRDITPQLKL-EEVPE 234
           A S+   D+   + + F E   V+ +   +KR ++L +  +   VR+  P+  + EE+P+
Sbjct: 234 AHSRKSDDVDSFDDESFDEKSRVKDNEARQKRRRELSDD-DRKDVRETQPKKSVKEELPQ 292

Query: 235 LHFPAALDGAFTPSLEP 285
           +  P   + A +PS  P
Sbjct: 293 IPLPPKTEAAASPSPAP 309


>AF025461-8|AAB71000.1|  286|Caenorhabditis elegans Hypothetical
           protein M01D1.9 protein.
          Length = 286

 Score = 28.7 bits (61), Expect = 2.0
 Identities = 12/24 (50%), Positives = 18/24 (75%)
 Frame = -1

Query: 115 FHKNVASFRLLNLKKLWTQHRQIL 44
           FH+ + SF+ L+LK++ TQ  QIL
Sbjct: 175 FHRTLTSFQKLSLKRILTQKFQIL 198


>U53151-4|AAB37066.1|  335|Caenorhabditis elegans Hypothetical
           protein T05B11.1 protein.
          Length = 335

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 12/22 (54%), Positives = 14/22 (63%)
 Frame = +3

Query: 264 LHSVTRTRIPDASQFRTGTASR 329
           +H  TRT  P+  QFR G ASR
Sbjct: 224 IHWATRTTAPNTIQFRNGCASR 245


>AL031621-1|CAA20933.1|  279|Caenorhabditis elegans Hypothetical
           protein F28H6.2 protein.
          Length = 279

 Score = 28.3 bits (60), Expect = 2.6
 Identities = 13/23 (56%), Positives = 16/23 (69%), Gaps = 2/23 (8%)
 Frame = -1

Query: 340 INPVLEAVPV--LNCEASGILVL 278
           +NP+LEA+P    NC A GIL L
Sbjct: 200 VNPILEAIPTRNRNCVAGGILQL 222


>Z69634-9|CAO82013.1|  575|Caenorhabditis elegans Hypothetical
           protein B0001.3b protein.
          Length = 575

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
 Frame = +1

Query: 7   RTVVDKEASGLKSGFADAVSKVFSDLKVGNLQHFYENRVVRYHARLKKRSQ---DLREQC 177
           RTVV    SG K+G+    SK   D  V    H YEN    Y     K  +   D+ E  
Sbjct: 174 RTVVGFVCSGFKNGYQYVFSKQL-DKDV----HLYENECPSYQDMTGKWIEMDIDMEEFR 228

Query: 178 EAMSVRDITPQLK---LEEVPELHFPAALDGAF 267
               VR++ P      + EVPE+      DG +
Sbjct: 229 IIRPVREVEPIFPTRIMLEVPEIFVEFEYDGFY 261


>Z69634-8|CAA93452.4|  591|Caenorhabditis elegans Hypothetical
           protein B0001.3a protein.
          Length = 591

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 6/93 (6%)
 Frame = +1

Query: 7   RTVVDKEASGLKSGFADAVSKVFSDLKVGNLQHFYENRVVRYHARLKKRSQ---DLREQC 177
           RTVV    SG K+G+    SK   D  V    H YEN    Y     K  +   D+ E  
Sbjct: 190 RTVVGFVCSGFKNGYQYVFSKQL-DKDV----HLYENECPSYQDMTGKWIEMDIDMEEFR 244

Query: 178 EAMSVRDITPQLK---LEEVPELHFPAALDGAF 267
               VR++ P      + EVPE+      DG +
Sbjct: 245 IIRPVREVEPIFPTRIMLEVPEIFVEFEYDGFY 277


>AL021171-5|CAE17871.1|  688|Caenorhabditis elegans Hypothetical
           protein H04D03.4 protein.
          Length = 688

 Score = 27.5 bits (58), Expect = 4.6
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = +1

Query: 37  LKSGFADAVSKVFSDLKVGNLQHFYENRV 123
           LK  F     K+   L +GN ++F++NR+
Sbjct: 114 LKKLFNKTTKKILRHLDIGNKRYFFDNRI 142


>U80840-12|AAB37925.1|  694|Caenorhabditis elegans Hypothetical
           protein F08D12.1 protein.
          Length = 694

 Score = 27.1 bits (57), Expect = 6.0
 Identities = 19/78 (24%), Positives = 33/78 (42%), Gaps = 1/78 (1%)
 Frame = +1

Query: 28  ASGLKSGFADAVSKVFSDLKVGNLQHFYENRVVRYHARL-KKRSQDLREQCEAMSVRDIT 204
           AS  K+   +A+  +  DL     Q   E    ++  +L +K  +DL+ QC  +     T
Sbjct: 476 ASTAKNQTPEALKSILEDLVEVEQQRGNETAATKHLEKLVEKFPEDLQLQCRLVGAYSKT 535

Query: 205 PQLKLEEVPELHFPAALD 258
              K E +    FP  ++
Sbjct: 536 DPKKAESLSAKLFPETME 553


>Z49128-4|CAA88954.1|  541|Caenorhabditis elegans Hypothetical
           protein M03C11.4 protein.
          Length = 541

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = +1

Query: 37  LKSGFADAVSKV-FSDLKVGNLQHFYENRVVRYHARLKKRSQDLREQCEAMSVRDITPQL 213
           LK G++D + +     LK+   Q      ++RY A  KK  ++L+ Q   +  R   P  
Sbjct: 422 LKRGYSDKMRQAALEKLKISRQQARRVYEILRYRATNKKDKEELKAQRIDVKRRLYAPMK 481

Query: 214 KLEE 225
           K ++
Sbjct: 482 KSDQ 485


>U97405-9|AAB53012.2|  266|Caenorhabditis elegans C-term of
           hsp70-interacting protein(chip family) protein 1
           protein.
          Length = 266

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +1

Query: 49  FADAVSKVFSDLKVGNLQHFYENRVVRYHA--RLKKRSQDLREQCEAMSVRDITP 207
           + DAV      +KV  L  +Y+NR + Y     LK   +D +   E +S  ++ P
Sbjct: 21  YDDAVDHYSKAIKVNPLPKYYQNRAMCYFQLNNLKMTEEDCKRALE-LSPNEVKP 74


>U41278-4|AAK31513.3|  928|Caenorhabditis elegans Hypothetical
           protein F33G12.5 protein.
          Length = 928

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 17/50 (34%), Positives = 22/50 (44%)
 Frame = +1

Query: 85  KVGNLQHFYENRVVRYHARLKKRSQDLREQCEAMSVRDITPQLKLEEVPE 234
           K G L+ +  + + R  AR   RS       E     D+    KLEEVPE
Sbjct: 795 KGGVLKEYQTSSISRKAARRVSRSYSHSTVDEMSGDEDVLVDAKLEEVPE 844


>AL132902-4|CAC14420.1| 1913|Caenorhabditis elegans Hypothetical
            protein Y71A12B.4 protein.
          Length = 1913

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 10/30 (33%), Positives = 18/30 (60%)
 Frame = -1

Query: 394  QIVKIPLVPFLCHPLQHPINPVLEAVPVLN 305
            +I + P++ F+CH + H    +L  + VLN
Sbjct: 1477 RIGRAPIIKFVCHIVSHVYFTILLTIVVLN 1506


>AF303269-1|AAG50227.1|  266|Caenorhabditis elegans
           Hsp70-interacting protein protein.
          Length = 266

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 16/55 (29%), Positives = 26/55 (47%), Gaps = 2/55 (3%)
 Frame = +1

Query: 49  FADAVSKVFSDLKVGNLQHFYENRVVRYHA--RLKKRSQDLREQCEAMSVRDITP 207
           + DAV      +KV  L  +Y+NR + Y     LK   +D +   E +S  ++ P
Sbjct: 21  YDDAVDHYSKAIKVNPLPKYYQNRAMCYFQLNNLKMTEEDCKRALE-LSPNEVKP 74


>AC024791-31|AAF60655.1|  181|Caenorhabditis elegans Hypothetical
           protein Y47G6A.3 protein.
          Length = 181

 Score = 26.6 bits (56), Expect = 8.0
 Identities = 11/31 (35%), Positives = 21/31 (67%)
 Frame = +1

Query: 127 RYHARLKKRSQDLREQCEAMSVRDITPQLKL 219
           RY  RL++ ++ L+   + M+ RD+ P+LK+
Sbjct: 48  RYDLRLRQIAEKLKIAVDEMAGRDLHPKLKM 78


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.315    0.130    0.360 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,104,795
Number of Sequences: 27780
Number of extensions: 159474
Number of successful extensions: 431
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 408
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 431
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 756625558
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.6 bits)