Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4f19
         (687 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC092500-1|AAH92500.1|  334|Homo sapiens TMCO7 protein protein.        53   8e-07
AB051533-1|BAB21837.1| 1098|Homo sapiens KIAA1746 protein protein.     53   8e-07

>BC092500-1|AAH92500.1|  334|Homo sapiens TMCO7 protein protein.
          Length = 334

 Score = 53.2 bits (122), Expect = 8e-07
 Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
 Frame = +2

Query: 200 ISVKQQKVLRTCFQLVASLGVSTCLIPGLGISISKRCSFSNTIPS---FNLSQEQKYSIL 370
           +S+ QQK ++   Q V +LG+   L+PG+G+ +  R  F   +     F+ + +    + 
Sbjct: 137 LSISQQKTVQFVLQFVVTLGICPYLMPGVGVPLRYRTEFGAVVQDVVCFDAAPDATRRLY 196

Query: 371 VDCTDFIHRSYEIPVYKNIIMTLHLSDYLAALIQLSFAQLK-KPGTYKDFVMTEEMYKTF 547
             C   ++ +    +  ++I   H  D  A L QL F   K K  T  + V+TEE  +T 
Sbjct: 197 TSCKALLNVAQHTSL-GSLIFCHHFGDIAAGLCQLGFCPTKRKLLTPAEEVLTEE-ERTL 254

Query: 548 TNDRQKYLKIYDNLVSTCFQPTLMKELLVLQ 640
           +    +      +++   +QP  ++ELL+LQ
Sbjct: 255 SRGALR------DMLDQVYQPLAVRELLILQ 279


>AB051533-1|BAB21837.1| 1098|Homo sapiens KIAA1746 protein protein.
          Length = 1098

 Score = 53.2 bits (122), Expect = 8e-07
 Identities = 39/151 (25%), Positives = 72/151 (47%), Gaps = 4/151 (2%)
 Frame = +2

Query: 200 ISVKQQKVLRTCFQLVASLGVSTCLIPGLGISISKRCSFSNTIPS---FNLSQEQKYSIL 370
           +S+ QQK ++   Q V +LG+   L+PG+G+ +  R  F   +     F+ + +    + 
Sbjct: 141 LSISQQKTVQFVLQFVVTLGICPYLMPGVGVPLRYRTEFGAVVQDVVCFDAAPDATRRLY 200

Query: 371 VDCTDFIHRSYEIPVYKNIIMTLHLSDYLAALIQLSFAQLK-KPGTYKDFVMTEEMYKTF 547
             C   ++ +    +  ++I   H  D  A L QL F   K K  T  + V+TEE  +T 
Sbjct: 201 TSCKALLNVAQHTSL-GSLIFCHHFGDIAAGLCQLGFCPTKRKLLTPAEEVLTEE-ERTL 258

Query: 548 TNDRQKYLKIYDNLVSTCFQPTLMKELLVLQ 640
           +    +      +++   +QP  ++ELL+LQ
Sbjct: 259 SRGALR------DMLDQVYQPLAVRELLILQ 283


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 89,267,049
Number of Sequences: 237096
Number of extensions: 1699421
Number of successful extensions: 2760
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 2697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2758
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 7839245960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)