Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4f16
         (648 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    21   8.7  
EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetyla...    21   8.7  
EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetyla...    21   8.7  
AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  
AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase ...    21   8.7  

>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = -3

Query: 394 GLYSAIADRIRGVRHIE 344
           GLY+  A+ IR   H+E
Sbjct: 76  GLYTKSANTIRSFTHVE 92


>EU019713-1|ABU25225.1|  528|Tribolium castaneum chitin deacetylase
           2B protein.
          Length = 528

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 565 HRYGNYLVIHILYRR 609
           H+Y NY  +  L+RR
Sbjct: 227 HKYTNYSAVQDLHRR 241


>EU019712-1|ABU25224.1|  535|Tribolium castaneum chitin deacetylase
           2A protein.
          Length = 535

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/15 (46%), Positives = 10/15 (66%)
 Frame = +1

Query: 565 HRYGNYLVIHILYRR 609
           H+Y NY  +  L+RR
Sbjct: 234 HKYTNYSAVQDLHRR 248


>AY295880-2|AAQ62694.1| 1558|Tribolium castaneum chitin synthase
           variant 2 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/35 (28%), Positives = 12/35 (34%)
 Frame = +2

Query: 353 PHTTDPVCNRAVQAVVESSAKFKRARSYLWFWRLI 457
           P      CNR +    +   K   A    W W LI
Sbjct: 102 PDKVTVFCNRDLGREKQFIVKLPSAERVAWMWCLI 136


>AY295880-1|AAQ62693.1| 1558|Tribolium castaneum chitin synthase
           variant 1 protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/35 (28%), Positives = 12/35 (34%)
 Frame = +2

Query: 353 PHTTDPVCNRAVQAVVESSAKFKRARSYLWFWRLI 457
           P      CNR +    +   K   A    W W LI
Sbjct: 102 PDKVTVFCNRDLGREKQFIVKLPSAERVAWMWCLI 136


>AY291476-1|AAQ55060.1| 1558|Tribolium castaneum chitin synthase
           CHS1B protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/35 (28%), Positives = 12/35 (34%)
 Frame = +2

Query: 353 PHTTDPVCNRAVQAVVESSAKFKRARSYLWFWRLI 457
           P      CNR +    +   K   A    W W LI
Sbjct: 102 PDKVTVFCNRDLGREKQFIVKLPSAERVAWMWCLI 136


>AY291475-1|AAQ55059.1| 1558|Tribolium castaneum chitin synthase
           CHS1A protein.
          Length = 1558

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 10/35 (28%), Positives = 12/35 (34%)
 Frame = +2

Query: 353 PHTTDPVCNRAVQAVVESSAKFKRARSYLWFWRLI 457
           P      CNR +    +   K   A    W W LI
Sbjct: 102 PDKVTVFCNRDLGREKQFIVKLPSAERVAWMWCLI 136


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,310
Number of Sequences: 336
Number of extensions: 3418
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16656800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)