Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4f12
         (774 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    25   0.67 
AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory recept...    25   0.67 
EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine vasopre...    21   8.3  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 15/41 (36%), Positives = 22/41 (53%)
 Frame = -1

Query: 231 FMCELVLFLLYSVIFYNYYSFLLKSTFTAIQYISFSIHYRY 109
           F C L++ L    I+Y YY+F+L   FT    +   I+Y Y
Sbjct: 228 FYCVLIILLC---IYYFYYAFIL---FTVHLLLLVCIYYFY 262



 Score = 22.2 bits (45), Expect = 4.7
 Identities = 12/38 (31%), Positives = 19/38 (50%)
 Frame = -1

Query: 231 FMCELVLFLLYSVIFYNYYSFLLKSTFTAIQYISFSIH 118
           F+   V FLL +  FY  +  LL   +    +I F++H
Sbjct: 89  FIIFTVHFLLCTYYFYYAFIILLCVYYFYYAFIIFTVH 126


>AM292337-1|CAL23149.2|  452|Tribolium castaneum gustatory receptor
           candidate 16 protein.
          Length = 452

 Score = 25.0 bits (52), Expect = 0.67
 Identities = 14/63 (22%), Positives = 32/63 (50%)
 Frame = -1

Query: 237 VKFMCELVLFLLYSVIFYNYYSFLLKSTFTAIQYISFSIHYRY*FDFLVSDVIKLQ*FVP 58
           V+ +   V+F++ +++F+   S L       I+ I+F   +R   + ++  V+ L  F+ 
Sbjct: 40  VQTVAYFVIFIILTIVFFEKRSALSPFELIQIRTINFVATFRTIANIILMAVLFLGTFIG 99

Query: 57  KTK 49
           + K
Sbjct: 100 RAK 102


>EF222296-1|ABN79656.2|  403|Tribolium castaneum arginine
           vasopressin receptor protein.
          Length = 403

 Score = 21.4 bits (43), Expect = 8.3
 Identities = 10/43 (23%), Positives = 23/43 (53%)
 Frame = -1

Query: 204 LYSVIFYNYYSFLLKSTFTAIQYISFSIHYRY*FDFLVSDVIK 76
           +Y  I +   + L+ +  + +  +++ I YR+   FL+  V+K
Sbjct: 75  MYFFILHLSIADLITAFLSVLPQLAWDITYRFYGGFLLCKVVK 117


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,252
Number of Sequences: 336
Number of extensions: 3062
Number of successful extensions: 7
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20857569
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)