Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4f10
         (687 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q4Z5U0 Cluster: Putative uncharacterized protein; n=1; ...    34   3.7  
UniRef50_A4VF45 Cluster: Putative uncharacterized protein; n=1; ...    34   3.7  
UniRef50_UPI0000E4A984 Cluster: PREDICTED: hypothetical protein,...    33   8.6  

>UniRef50_Q4Z5U0 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium berghei|Rep: Putative uncharacterized protein
           - Plasmodium berghei
          Length = 86

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 16/36 (44%), Positives = 24/36 (66%)
 Frame = -3

Query: 160 YFGMFRVLAVYFDSIFILFYVMLFIMIPL*NILLYF 53
           Y  +F ++  YF   FI+FYV+LFI  P  N+++YF
Sbjct: 49  YALLFFIMLYYFLLCFIIFYVLLFIYKP--NLIVYF 82


>UniRef50_A4VF45 Cluster: Putative uncharacterized protein; n=1;
           Tetrahymena thermophila SB210|Rep: Putative
           uncharacterized protein - Tetrahymena thermophila SB210
          Length = 154

 Score = 33.9 bits (74), Expect = 3.7
 Identities = 16/39 (41%), Positives = 26/39 (66%)
 Frame = -3

Query: 157 FGMFRVLAVYFDSIFILFYVMLFIMIPL*NILLYFAFGL 41
           FGM  +L + FD + +LF+++L  + PL  ++L F FGL
Sbjct: 26  FGML-LLLLAFDQLLLLFWLLLLKLFPLTLLVLLFPFGL 63


>UniRef50_UPI0000E4A984 Cluster: PREDICTED: hypothetical protein,
           partial; n=3; Strongylocentrotus purpuratus|Rep:
           PREDICTED: hypothetical protein, partial -
           Strongylocentrotus purpuratus
          Length = 159

 Score = 32.7 bits (71), Expect = 8.6
 Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 1/52 (1%)
 Frame = -2

Query: 176 YVVLLVFRHVSSFGSLF*FNFYFILCDA-IYHDSIVEYIIIFCIWLGWFVRV 24
           Y+V+L F H S F S   +N+  +  D+ + + SI  ++  F  WL +F+ +
Sbjct: 31  YLVILSFFHFSEFFSTCIYNYESLSLDSYLLNHSIAYHVAAFASWLEFFIEL 82


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 583,412,318
Number of Sequences: 1657284
Number of extensions: 10658411
Number of successful extensions: 23898
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 22900
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23855
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 53719013270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)