Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4f10
         (687 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    23   3.1  
AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory recept...    21   7.2  
AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory recept...    21   7.2  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.5  

>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 22.6 bits (46), Expect = 3.1
 Identities = 14/49 (28%), Positives = 19/49 (38%), Gaps = 3/49 (6%)
 Frame = +3

Query: 204 YSIKELLQYAVAYTAYCVCRSLPVIFYLLLGVYYFVCQTV---WCILFC 341
           Y +  L      Y  YC      V    LL +Y+F C  +     +LFC
Sbjct: 135 YFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLFC 183



 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/28 (28%), Positives = 16/28 (57%)
 Frame = -1

Query: 114 LFYFM*CYLS*FHCRIYYYILHLAWMVC 31
           LF+ +  Y   F+C    + +HL +++C
Sbjct: 140 LFFLLCIYY--FYCAFIIFTVHLLFLLC 165


>AM292360-1|CAL23172.2|  427|Tribolium castaneum gustatory receptor
           candidate 39 protein.
          Length = 427

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 270 PVIFYLLLGVYYFVCQTVWCI 332
           P+IF+ L  + Y +C   W +
Sbjct: 168 PIIFHNLTLITYSLCVISWAV 188


>AM292331-1|CAL23143.2|  437|Tribolium castaneum gustatory receptor
           candidate 10 protein.
          Length = 437

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 7/21 (33%), Positives = 12/21 (57%)
 Frame = +3

Query: 270 PVIFYLLLGVYYFVCQTVWCI 332
           P+IF+ L  + Y +C   W +
Sbjct: 168 PIIFHNLTLITYSLCVISWAV 188


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 7/22 (31%), Positives = 10/22 (45%)
 Frame = -3

Query: 457 TVAFLRNAGKACFMLQKKKVLC 392
           T  F  N    CF ++  +V C
Sbjct: 694 TTCFCENGNNKCFTMECPQVTC 715


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 153,421
Number of Sequences: 336
Number of extensions: 3519
Number of successful extensions: 11
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18010165
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)