Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4f08
         (643 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochr...    23   2.1  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          23   2.8  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    23   2.8  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    23   2.8  
X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.       21   8.6  

>AF265298-1|AAG17641.1|  124|Tribolium castaneum putative cytochrome
           P450 monooxigenase protein.
          Length = 124

 Score = 23.0 bits (47), Expect = 2.1
 Identities = 10/32 (31%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = -2

Query: 621 FIQMKLY-IYLSSCFFPIFKKFRSNKYLTKNK 529
           F+ + +Y ++ +  +FP  +KF  N+YL +N+
Sbjct: 84  FLSLFIYGMHHNEKYFPEPEKFDPNRYLPENQ 115


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 403 DLCNENLSQFTLQQVQHLL*VM 338
           D+ ++  S FTL ++QH L V+
Sbjct: 303 DVVHKKCSNFTLPEIQHNLDVL 324


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 592 VKLLLSHFQKVQIKQVLNKEQN 527
           +K LLS+ + +QI  +  KE+N
Sbjct: 135 LKTLLSNLESIQIYSIKPKERN 156


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 22.6 bits (46), Expect = 2.8
 Identities = 9/22 (40%), Positives = 15/22 (68%)
 Frame = -1

Query: 592 VKLLLSHFQKVQIKQVLNKEQN 527
           +K LLS+ + +QI  +  KE+N
Sbjct: 91  LKTLLSNLESIQIYSIKPKERN 112


>X91618-1|CAA62821.1|  524|Tribolium castaneum hunchback protein.
          Length = 524

 Score = 21.0 bits (42), Expect = 8.6
 Identities = 7/17 (41%), Positives = 11/17 (64%)
 Frame = -3

Query: 530 KLNCIICTFLTKITNHL 480
           +L C  C F+T+  +HL
Sbjct: 230 RLTCPKCPFITEYKHHL 246


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 118,476
Number of Sequences: 336
Number of extensions: 2156
Number of successful extensions: 8
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16448590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)