Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4f07
         (224 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical ...    28   1.0  
U23175-3|AAC46712.2|  959|Caenorhabditis elegans Anion/bicarbona...    27   2.4  
AY887905-1|AAX34417.1|  959|Caenorhabditis elegans anion transpo...    27   2.4  
AC199170-5|ABO33263.1|   95|Caenorhabditis elegans Hypothetical ...    26   3.1  
AF101312-1|AAC69221.3|  813|Caenorhabditis elegans Hypothetical ...    26   4.1  
Z66494-7|CAA91261.1|  445|Caenorhabditis elegans Hypothetical pr...    25   5.5  
U97549-9|AAB52849.2|  472|Caenorhabditis elegans Hypothetical pr...    25   5.5  
U13071-3|AAA20673.1|  286|Caenorhabditis elegans Hypothetical pr...    25   5.5  
AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine re...    25   5.5  
U42437-3|AAA83495.1|  297|Caenorhabditis elegans Hypothetical pr...    25   7.2  
AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical ...    25   9.6  
AC006620-1|AAF39780.1|  754|Caenorhabditis elegans Hypothetical ...    25   9.6  

>AF016654-1|AAB66028.1|  731|Caenorhabditis elegans Hypothetical
           protein C17A2.5 protein.
          Length = 731

 Score = 27.9 bits (59), Expect = 1.0
 Identities = 12/29 (41%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
 Frame = +1

Query: 79  VIVHRKNTR-KIVTLHFTGFLPIIEATIV 162
           +I H +N+R K  TLHF  +LP++   I+
Sbjct: 249 LIEHEENSRDKPFTLHFISYLPMLSVIII 277


>U23175-3|AAC46712.2|  959|Caenorhabditis elegans Anion/bicarbonate
           transporter familyprotein 3, isoform a protein.
          Length = 959

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +3

Query: 63  CSMNGCHSTSEKHKKDSNITFHGFPSYHRSDNCSENTF 176
           C      STSE H+  ++ T H   S+H  +  + + +
Sbjct: 133 CHFRRPKSTSEMHQSCTSATIHSLESHHNEERRASHVY 170


>AY887905-1|AAX34417.1|  959|Caenorhabditis elegans anion
           transporter ABTS-3 protein.
          Length = 959

 Score = 26.6 bits (56), Expect = 2.4
 Identities = 10/38 (26%), Positives = 18/38 (47%)
 Frame = +3

Query: 63  CSMNGCHSTSEKHKKDSNITFHGFPSYHRSDNCSENTF 176
           C      STSE H+  ++ T H   S+H  +  + + +
Sbjct: 133 CHFRRPKSTSEMHQSCTSATIHSLESHHNEERRASHVY 170


>AC199170-5|ABO33263.1|   95|Caenorhabditis elegans Hypothetical
           protein T08D2.4 protein.
          Length = 95

 Score = 26.2 bits (55), Expect = 3.1
 Identities = 10/25 (40%), Positives = 15/25 (60%)
 Frame = +3

Query: 51  KMTVCSMNGCHSTSEKHKKDSNITF 125
           K+ +C  + C    EKH + SN+TF
Sbjct: 41  KVLICGHSFCIICIEKHLRSSNLTF 65


>AF101312-1|AAC69221.3|  813|Caenorhabditis elegans Hypothetical
           protein F56E10.2 protein.
          Length = 813

 Score = 25.8 bits (54), Expect = 4.1
 Identities = 9/31 (29%), Positives = 17/31 (54%)
 Frame = +3

Query: 39  KILLKMTVCSMNGCHSTSEKHKKDSNITFHG 131
           KI  ++ +  ++GC + S  HK +   T +G
Sbjct: 384 KIYKQLDLTELSGCFAASSSHKDEDTDTLYG 414


>Z66494-7|CAA91261.1|  445|Caenorhabditis elegans Hypothetical
           protein C34C6.7 protein.
          Length = 445

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = +3

Query: 42  ILLKMTVCSMNGCHSTSEKHKKDSNITFHGFPSYHRSDN 158
           I+L+   CS+  CH++S  H  D ++       + R D+
Sbjct: 360 IVLEAVKCSLRSCHNSS-SHWHDRSVYLPRITRHRRQDS 397


>U97549-9|AAB52849.2|  472|Caenorhabditis elegans Hypothetical
           protein F15A8.7 protein.
          Length = 472

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 11/27 (40%), Positives = 16/27 (59%)
 Frame = +3

Query: 72  NGCHSTSEKHKKDSNITFHGFPSYHRS 152
           +G H+ SE H+   +I  HG P+  RS
Sbjct: 434 HGAHNHSEHHQLHRSIFHHGAPTSIRS 460


>U13071-3|AAA20673.1|  286|Caenorhabditis elegans Hypothetical
           protein T22F7.4 protein.
          Length = 286

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 9/22 (40%), Positives = 12/22 (54%)
 Frame = -3

Query: 186 CNNGKCFLNNCRFDDRKETREM 121
           C   +CF  NCRF  R E + +
Sbjct: 181 CETLECFSRNCRFFQRPEEKAL 202


>AF022976-4|AAC69083.2|  345|Caenorhabditis elegans Serpentine
           receptor, class h protein37 protein.
          Length = 345

 Score = 25.4 bits (53), Expect = 5.5
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -3

Query: 117 CYYLSCVFPM-YYDIRSLNKPSFLIKFSGVLFNTTRP 10
           C +L  VF +  YD +    PS L+K +GVL N  RP
Sbjct: 62  CEWLGNVFLIDVYDFQ----PSILVKINGVLKNYIRP 94


>U42437-3|AAA83495.1|  297|Caenorhabditis elegans Hypothetical
           protein F30B5.6 protein.
          Length = 297

 Score = 25.0 bits (52), Expect = 7.2
 Identities = 8/14 (57%), Positives = 9/14 (64%)
 Frame = -3

Query: 186 CNNGKCFLNNCRFD 145
           C+N KC  N C FD
Sbjct: 157 CDNSKCAYNQCYFD 170


>AL110501-1|CAB54509.1| 2129|Caenorhabditis elegans Hypothetical
            protein Y79H2A.3a protein.
          Length = 2129

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 81   HSTSEKHKKDSNITFHGFPSYHRSDNCSEN 170
            H  S  HK  S   FH +P YH   N  +N
Sbjct: 1379 HLCSTDHK--STYMFHKYPHYHAEVNREKN 1406


>AC006620-1|AAF39780.1|  754|Caenorhabditis elegans Hypothetical
           protein C51G7.3 protein.
          Length = 754

 Score = 24.6 bits (51), Expect = 9.6
 Identities = 12/30 (40%), Positives = 14/30 (46%)
 Frame = +3

Query: 81  HSTSEKHKKDSNITFHGFPSYHRSDNCSEN 170
           H  S  HK  S   FH +P YH   N  +N
Sbjct: 4   HLCSTDHK--STYMFHKYPHYHAEVNREKN 31


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,827,932
Number of Sequences: 27780
Number of extensions: 85875
Number of successful extensions: 297
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 291
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 297
length of database: 12,740,198
effective HSP length: 54
effective length of database: 11,240,078
effective search space used: 224801560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)