Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4f06
(626 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
04_04_1374 - 33028790-33028951,33029033-33029087,33029402-330294... 56 2e-08
02_01_0618 - 4629776-4630037,4630188-4630330,4631200-4631254,463... 48 6e-06
09_04_0075 - 14340458-14340551,14340643-14340814,14340895-143410... 39 0.004
07_01_0961 + 8070992-8071015,8071016-8071089,8073051-8073200,807... 36 0.026
08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686 36 0.035
08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187 33 0.14
09_04_0652 - 19227686-19227926,19229368-19232294 31 0.57
08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907 31 0.75
02_05_0400 + 28671562-28672219,28672365-28672441,28673679-286737... 31 0.75
02_05_0042 + 25351648-25351724,25351983-25352010,25352311-253523... 31 0.75
02_01_0003 + 13079-13610,14005-14312,14364-14549,14620-14707,148... 31 0.75
02_01_0739 + 5505630-5505654,5505965-5506049,5506444-5506519,550... 31 0.99
01_01_0543 + 3985771-3985866,3985965-3986145,3986668-3986780,398... 31 0.99
04_04_1694 - 35419278-35419565,35419744-35419861,35420404-354204... 30 1.3
08_01_0691 - 6115476-6116423,6116871-6117299 30 1.7
03_06_0759 - 36059872-36059928,36059934-36060125,36060241-360603... 30 1.7
07_03_0836 - 21856808-21858451,21858600-21859487,21860019-21860048 29 2.3
05_05_0016 - 21542300-21542886,21542956-21543286,21543310-215434... 29 4.0
08_02_1337 - 26238506-26238737,26239728-26240703,26241266-26242802 28 5.3
06_03_0293 + 19212963-19212965,19213900-19214235,19214658-192148... 28 5.3
06_03_0291 + 19198302-19198333,19199218-19199734,19200171-192003... 28 5.3
04_04_0664 - 27066253-27067155,27067242-27067508,27067707-270683... 28 7.0
03_06_0195 + 32256771-32258792 28 7.0
03_01_0307 + 2414709-2414762,2415769-2415841,2416090-2416154,241... 28 7.0
10_08_0249 + 16172811-16172987,16174048-16174299,16174426-161745... 27 9.2
10_08_0029 + 14270945-14271364,14271449-14272486 27 9.2
08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224 27 9.2
08_02_0707 - 20212190-20214592 27 9.2
08_01_0007 - 57681-57728,58260-58336,58418-58464,58808-58908,590... 27 9.2
05_04_0299 - 19958776-19958858,19958883-19959012,19960131-199601... 27 9.2
04_04_1431 - 33551127-33551300,33551362-33551433,33551508-335515... 27 9.2
01_07_0189 + 41875088-41875149,41875322-41875392,41875809-418759... 27 9.2
>04_04_1374 -
33028790-33028951,33029033-33029087,33029402-33029466,
33029558-33029701,33029825-33029878,33029971-33030220,
33030340-33030446,33031206-33031216,33032682-33032796,
33032897-33033005,33033088-33033203,33033288-33033647
Length = 515
Score = 56.4 bits (130), Expect = 2e-08
Identities = 25/75 (33%), Positives = 39/75 (52%), Gaps = 2/75 (2%)
Frame = +3
Query: 177 KITKNFSCSECSVPEQNWLCLHCGVVNCGRYVNGHAKNHADTLGHQLCISCDAYSVYCYK 356
K +KN +CS C W+C+ CG V CGRY GHA H H + + V+ Y
Sbjct: 244 KQSKNPTCSVCQTSGNLWICIICGFVGCGRYEEGHAIRHWKETQHCYSLDLETQRVWDYV 303
Query: 357 CDDYI--INDTENNI 395
D Y+ +N +++++
Sbjct: 304 GDSYVHRLNHSKSDV 318
>02_01_0618 -
4629776-4630037,4630188-4630330,4631200-4631254,
4631539-4631603,4631714-4631857,4632141-4632194,
4632363-4632410,4632466-4632541,4632624-4632722,
4633000-4633097,4633615-4633719,4633816-4633924,
4634137-4634252,4634332-4634496
Length = 512
Score = 48.0 bits (109), Expect = 6e-06
Identities = 18/33 (54%), Positives = 20/33 (60%)
Frame = +3
Query: 195 SCSECSVPEQNWLCLHCGVVNCGRYVNGHAKNH 293
SCS C E W+C+ CG V CGRY GHA H
Sbjct: 208 SCSVCGTSENLWICVICGHVGCGRYKGGHAIEH 240
>09_04_0075 -
14340458-14340551,14340643-14340814,14340895-14341066,
14341617-14341811,14341886-14342053,14342150-14342335,
14342797-14342881,14342896-14343206,14344222-14344569
Length = 576
Score = 38.7 bits (86), Expect = 0.004
Identities = 22/61 (36%), Positives = 28/61 (45%), Gaps = 3/61 (4%)
Frame = +3
Query: 207 CSVPEQN---WLCLHCGVVNCGRYVNGHAKNHADTLGHQLCISCDAYSVYCYKCDDYIIN 377
CS+ N + CL CG GR + HA H+ GH + I+ YC D Y IN
Sbjct: 126 CSISLSNLNVYACLVCGKYYQGRGLKSHAYTHSLEAGHHVFINLQTEKAYCLP-DGYEIN 184
Query: 378 D 380
D
Sbjct: 185 D 185
>07_01_0961 +
8070992-8071015,8071016-8071089,8073051-8073200,
8073307-8073592,8074077-8074220,8074357-8074665
Length = 328
Score = 35.9 bits (79), Expect = 0.026
Identities = 18/48 (37%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = -1
Query: 509 YIGITVIFILSAIFLLFSTVLFFIIL--LPNPYNTLPYFIYIVLSIIY 372
Y+ IT+I+ +S LF+ LF++ L PYN +P FI I+ S+++
Sbjct: 127 YLYITIIYTISYSMALFALALFYVACRDLLQPYNPVPKFI-IIKSVVF 173
>08_02_1335 - 26226784-26227015,26227493-26228474,26229021-26230686
Length = 959
Score = 35.5 bits (78), Expect = 0.035
Identities = 31/96 (32%), Positives = 42/96 (43%), Gaps = 13/96 (13%)
Frame = +3
Query: 114 RMECEHLLDNVKLEQIKVEDTKITKNF-SCSE--CSVPEQN--WLCLHCGVVNCGRYV-- 272
R EC HLLD + I V + +KN +C C + + +C C C R
Sbjct: 211 RTECRHLLDEEDVTLI-VSEVTTSKNIPACQHPGCKINGRTRIMVCTGCNKHFCTRAEAK 269
Query: 273 ---NGHAKNHADTLGHQ---LCISCDAYSVYCYKCD 362
+GHA+ HA H L S D Y YC+KC+
Sbjct: 270 KKPHGHARLHARKFEHHWVGLWYS-DPYKGYCFKCE 304
>08_02_1338 - 26244928-26245159,26246420-26247374,26247921-26249187
Length = 817
Score = 33.5 bits (73), Expect = 0.14
Identities = 18/60 (30%), Positives = 30/60 (50%), Gaps = 7/60 (11%)
Frame = +3
Query: 207 CSVPEQNWLCLHCGVVNC-GRYVN-----GHAKNHADTLGHQLCISC-DAYSVYCYKCDD 365
C+ +C+ C + C GR+ GH + HA GH + + D Y+ YC++C+D
Sbjct: 98 CTERHLMMVCVECDMHFCIGRFAKKSKPRGHIEEHAFDDGHPVALWYEDPYTGYCFECED 157
>09_04_0652 - 19227686-19227926,19229368-19232294
Length = 1055
Score = 31.5 bits (68), Expect = 0.57
Identities = 18/51 (35%), Positives = 24/51 (47%), Gaps = 6/51 (11%)
Frame = +3
Query: 228 WLCLHCGVVNCGRYVN-----GHAKNHADTLGHQLCISCDAYSV-YCYKCD 362
W+CL CG CG V+ GHA+ HA H D +V +C C+
Sbjct: 136 WVCLDCGRHFCGGEVDVTKPYGHARRHAKQDRHWWAARFDDPTVAFCLSCE 186
>08_02_1342 - 26268552-26268783,26270213-26271137,26271680-26272907
Length = 794
Score = 31.1 bits (67), Expect = 0.75
Identities = 15/67 (22%), Positives = 33/67 (49%), Gaps = 1/67 (1%)
Frame = +3
Query: 168 EDTKITKNFSCSECSVPEQNWLCLHCGVVNCGRYVNGHAKNHADTLGHQLCISCDAYS-V 344
ED + +++C + + +CL C + C + HA + + H + + + + V
Sbjct: 75 EDVPVCGDYTC-DVTAANDIMVCLECELRLCANHACIHAMHEEE---HSIALYYERLNRV 130
Query: 345 YCYKCDD 365
YC+KC++
Sbjct: 131 YCFKCEE 137
>02_05_0400 +
28671562-28672219,28672365-28672441,28673679-28673730,
28673851-28674008
Length = 314
Score = 31.1 bits (67), Expect = 0.75
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 318 KAGVRVCQHGSSHGHLHNDHSSPHHNVGKA 229
+A V +G HGH H+ H HH +G A
Sbjct: 74 QAAVAPAANGHGHGHGHHHHHHQHHQLGGA 103
>02_05_0042 +
25351648-25351724,25351983-25352010,25352311-25352373,
25352880-25352945,25353029-25353076,25353338-25353379,
25353499-25353714,25354066-25354188,25354352-25354564,
25354930-25355016,25355259-25355507,25356386-25356507,
25357135-25357225,25358467-25358882,25359489-25359609
Length = 653
Score = 31.1 bits (67), Expect = 0.75
Identities = 11/27 (40%), Positives = 17/27 (62%)
Frame = +3
Query: 180 ITKNFSCSECSVPEQNWLCLHCGVVNC 260
I N SC+EC P+ +W L+ G++ C
Sbjct: 362 IPGNDSCAECRSPDPDWASLNLGILIC 388
>02_01_0003 +
13079-13610,14005-14312,14364-14549,14620-14707,
14807-14887,14980-15044,15357-15497,15578-15694,
15995-16237,16326-16383,18127-18224
Length = 638
Score = 31.1 bits (67), Expect = 0.75
Identities = 11/45 (24%), Positives = 26/45 (57%)
Frame = +3
Query: 441 EKQNSREKQEDSRQDEDDCDANIPGLVTAPDDIVLNVIEGDIAVQ 575
++ +S + +D D+DD D N+ PD++ +++E D+ ++
Sbjct: 284 QQPSSMDDIDDEYDDDDDDDLNMRDATPEPDELDQDIVESDLELE 328
>02_01_0739 +
5505630-5505654,5505965-5506049,5506444-5506519,
5506694-5506857,5506878-5506935,5507283-5507399,
5507543-5507638,5507905-5508186
Length = 300
Score = 30.7 bits (66), Expect = 0.99
Identities = 17/68 (25%), Positives = 35/68 (51%)
Frame = +3
Query: 138 DNVKLEQIKVEDTKITKNFSCSECSVPEQNWLCLHCGVVNCGRYVNGHAKNHADTLGHQL 317
D+ K+ ++K E ++N C++CS P+ W + GV C + +G ++ + L
Sbjct: 7 DSAKMAKLK-ELLHRSENRICADCSAPDPKWASANIGVFICLK-CSGVHRSLGTHISKVL 64
Query: 318 CISCDAYS 341
++ D +S
Sbjct: 65 SVTLDQWS 72
>01_01_0543 +
3985771-3985866,3985965-3986145,3986668-3986780,
3986854-3987190,3987602-3987603,3987661-3987743,
3988017-3988116,3988330-3988463,3988711-3988788,
3989333-3989387,3990159-3990239,3990369-3990567,
3990609-3990699,3990770-3990892,3991440-3991528,
3992450-3992539,3992619-3992792,3992911-3993035,
3993246-3993372,3993826-3993998
Length = 816
Score = 30.7 bits (66), Expect = 0.99
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 6/50 (12%)
Frame = +3
Query: 192 FSCSECSVPEQNWLCLHCGVVNCGRYV------NGHAKNHADTLGHQLCI 323
+ CS+C E WL L G++ CGR + N HA H + + L +
Sbjct: 181 WKCSKCDKTENLWLNLTDGMILCGRRLWDGSGGNNHAIEHYEQTKYPLAV 230
>04_04_1694 - 35419278-35419565,35419744-35419861,35420404-35420490,
35420909-35420931,35421647-35421843,35421964-35422159,
35422382-35422481,35423288-35423374,35424053-35424282,
35424678-35424763,35425148-35425271,35425415-35428573,
35430014-35430019
Length = 1566
Score = 30.3 bits (65), Expect = 1.3
Identities = 19/67 (28%), Positives = 31/67 (46%), Gaps = 2/67 (2%)
Frame = +3
Query: 201 SECSVPEQNWLCLHCGVVNCGRYVNGHAKNHADTLGHQL-CISC-DAYSVYCYKCDDYII 374
S+ +PE +W C +C +CG N ++ T L C+ C D+Y C +
Sbjct: 1053 SDQELPEGSWYCHNCTCRSCG---NPLSEKEVSTFSAILKCLQCGDSYHDTCIDQEMLPC 1109
Query: 375 NDTENNI 395
D ++NI
Sbjct: 1110 GDKQSNI 1116
>08_01_0691 - 6115476-6116423,6116871-6117299
Length = 458
Score = 29.9 bits (64), Expect = 1.7
Identities = 15/53 (28%), Positives = 22/53 (41%)
Frame = +3
Query: 207 CSVPEQNWLCLHCGVVNCGRYVNGHAKNHADTLGHQLCISCDAYSVYCYKCDD 365
C P L + + CG G A +H+ GH + A+S C + DD
Sbjct: 132 CIEPPSTVLAIQVTFLRCGGLALGSAVHHSAVDGHSMFHFLQAWSYLCREGDD 184
>03_06_0759 -
36059872-36059928,36059934-36060125,36060241-36060348,
36060440-36060712,36060923-36061009,36061085-36061276,
36061841-36061969,36062087-36062200,36062446-36062490,
36062785-36062956,36063229-36063515,36063989-36064456
Length = 707
Score = 29.9 bits (64), Expect = 1.7
Identities = 24/102 (23%), Positives = 48/102 (47%), Gaps = 11/102 (10%)
Frame = -1
Query: 551 NIEHYIIWSSDQTRYIGITVIFIL----SAIFLLF------STVLFFIILLPNPYNTLPY 402
+I+ I+S ++ T++F+L S+I LF S V +F+I L N +N Y
Sbjct: 493 HIDEIKIYSHEEANQHSSTMVFLLGHFLSSIPFLFLVTISSSLVFYFLIGLRNEFNLFMY 552
Query: 401 FIY-IVLSIIYNVIITFVTIYRISITANAKLVSECVSMVLRM 279
F+ + + ++ N + + Y T L C+ +++ +
Sbjct: 553 FVVTMFMCLLANEALMMIVAYIWLDTYKCTLTLICLYVIMML 594
>07_03_0836 - 21856808-21858451,21858600-21859487,21860019-21860048
Length = 853
Score = 29.5 bits (63), Expect = 2.3
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Frame = -1
Query: 500 ITVIFILSAIFLLFSTVLFF--IILLPNPYNTLPYFIYIVLSIIYNVIITFVTIYRISIT 327
+T +F+L +LLF + F I + P+ T Y +Y+V+ I + +I V I +T
Sbjct: 623 VTSVFLL--FYLLFPVIWIFRGIFYIQKPFPT--YVLYLVIVIFMSEMIGMVEIKWAGLT 678
Query: 326 ANAKLVSECVSMVLRMAIYITTTVH 252
+ +E ++ A+Y +H
Sbjct: 679 LLDWIRNEQFYIIGATAVYPLAVLH 703
>05_05_0016 -
21542300-21542886,21542956-21543286,21543310-21543419,
21543526-21544069,21544190-21544345
Length = 575
Score = 28.7 bits (61), Expect = 4.0
Identities = 16/81 (19%), Positives = 32/81 (39%), Gaps = 1/81 (1%)
Frame = +3
Query: 360 DDYIINDTENNIDKXXXXXXXXXXXNDEKQNSREKQEDSRQDEDDCDANIPGLVTAPD-D 536
DD + + E N D N+E + + ++ S D+D D++ + D +
Sbjct: 299 DDVEVEENEENSDNEGNDGNEELGENEENEGNETGEDSSSSDDDSSDSSSDDSDESSDEE 358
Query: 537 IVLNVIEGDIAVQPTSSSLDP 599
L V+ A+ ++P
Sbjct: 359 TALAVLPAQAALSVLKRKINP 379
>08_02_1337 - 26238506-26238737,26239728-26240703,26241266-26242802
Length = 914
Score = 28.3 bits (60), Expect = 5.3
Identities = 11/34 (32%), Positives = 19/34 (55%), Gaps = 1/34 (2%)
Frame = +3
Query: 276 GHAKNHADTLGHQLCI-SCDAYSVYCYKCDDYII 374
GH + HA H + + D Y YC++C+D ++
Sbjct: 240 GHIREHALLQEHWVAVWHNDLYVGYCFECEDSLV 273
>06_03_0293 +
19212963-19212965,19213900-19214235,19214658-19214870,
19216134-19216408,19216504-19216615,19217181-19217417,
19217445-19217462
Length = 397
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = -1
Query: 491 IFILSAIFLLFSTVLFFIILLPNPYNTLPYFIYIVLSIIYNVIITFVTIYRI 336
IF+LS IF + LFF I + N NT +++ L I +V+ F I+ I
Sbjct: 11 IFVLSCIFAVSVDPLFFYIPVINENNTC-WYLDKKLEITASVLRFFTDIFYI 61
>06_03_0291 +
19198302-19198333,19199218-19199734,19200171-19200383,
19201067-19201111,19201671-19201945,19202041-19202152,
19202453-19202539,19202727-19202963,19204127-19204825
Length = 738
Score = 28.3 bits (60), Expect = 5.3
Identities = 19/52 (36%), Positives = 28/52 (53%)
Frame = -1
Query: 491 IFILSAIFLLFSTVLFFIILLPNPYNTLPYFIYIVLSIIYNVIITFVTIYRI 336
IF+LS IF + LFF I + N NT +++ L I +V+ F I+ I
Sbjct: 81 IFVLSCIFAVSVDPLFFYIPVINDNNTC-WYLDKKLEITASVLRFFTDIFYI 131
>04_04_0664 -
27066253-27067155,27067242-27067508,27067707-27068368,
27068479-27069047,27070011-27070108
Length = 832
Score = 27.9 bits (59), Expect = 7.0
Identities = 12/65 (18%), Positives = 28/65 (43%)
Frame = +3
Query: 360 DDYIINDTENNIDKXXXXXXXXXXXNDEKQNSREKQEDSRQDEDDCDANIPGLVTAPDDI 539
DD + + E N D N+E + ++ + D+D D++ ++ D+
Sbjct: 298 DDIEVEENEENTDNDGNDGNEEHVENEENEGNKSGEGSLSSDDDSSDSSSDDSNSSSDEE 357
Query: 540 VLNVI 554
+ +V+
Sbjct: 358 IASVV 362
>03_06_0195 + 32256771-32258792
Length = 673
Score = 27.9 bits (59), Expect = 7.0
Identities = 15/54 (27%), Positives = 26/54 (48%)
Frame = +3
Query: 348 CYKCDDYIINDTENNIDKXXXXXXXXXXXNDEKQNSREKQEDSRQDEDDCDANI 509
C+ +D I TEN D+ +D++++S +E ++E DCD I
Sbjct: 250 CFDEEDKI--GTENPDDESVDTGSSDEEESDDEEDSYSDEEIDDEEESDCDEEI 301
>03_01_0307 +
2414709-2414762,2415769-2415841,2416090-2416154,
2416288-2416365,2416880-2416999,2418021-2418091,
2418808-2418900,2419242-2419311,2420236-2420436,
2421345-2421557,2422354-2422440,2422441-2422652,
2422901-2423042,2423424-2423592,2424050-2424126,
2424393-2424563,2425095-2425171,2425299-2425401,
2426066-2426185,2426301-2426444,2426826-2426975,
2427398-2427541,2427816-2427903,2428672-2428799,
2429329-2429533,2429843-2430015,2430174-2430392,
2430490-2430684
Length = 1213
Score = 27.9 bits (59), Expect = 7.0
Identities = 7/17 (41%), Positives = 8/17 (47%)
Frame = +2
Query: 245 WCGELWSLCKWPCEEPC 295
W G +W C W PC
Sbjct: 311 WTGRIWEQCAWKFSRPC 327
>10_08_0249 +
16172811-16172987,16174048-16174299,16174426-16174505,
16174616-16174701,16174799-16174904,16174987-16175143,
16175220-16175315,16175797-16175845,16175946-16176205,
16176327-16176499,16176692-16176812,16176923-16176975,
16177088-16177217,16177371-16177516,16177887-16178075,
16178317-16178549,16178784-16178932,16179042-16179104
Length = 839
Score = 27.5 bits (58), Expect = 9.2
Identities = 14/57 (24%), Positives = 27/57 (47%), Gaps = 2/57 (3%)
Frame = -1
Query: 572 HCYISFNNIEHYIIWSSDQTRYIGITVI--FILSAIFLLFSTVLFFIILLPNPYNTL 408
H ++S + + S + Y G++ I L+ ++L ++L F PN YN +
Sbjct: 640 HVHLSLWEFDQNVFMGSSEYNYYGMSRIGESFLAGVYLHLPSILAFTAPHPNSYNRI 696
>10_08_0029 + 14270945-14271364,14271449-14272486
Length = 485
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -3
Query: 294 HGSSHGHLHNDHSSPHH 244
HG HGH H+ SSPHH
Sbjct: 201 HG--HGHHHHRRSSPHH 215
>08_02_1344 - 26280554-26280785,26281558-26282182,26282718-26284224
Length = 787
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +3
Query: 204 ECSVPEQNWL--CLHCGVVNCGRYVNGHAKNHADTLGHQLCISCDAYSV-YCYKCDD-YI 371
+C E+ + CL CG C HA+ HA H + + +V YC+ C+D Y
Sbjct: 69 KCGTTEERGILVCLDCGSSLCAL----HARWHARMNRHWVALMHKRPNVAYCFSCEDAYF 124
Query: 372 IN 377
I+
Sbjct: 125 IS 126
>08_02_0707 - 20212190-20214592
Length = 800
Score = 27.5 bits (58), Expect = 9.2
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = -3
Query: 321 CKAGVRVCQHGSSHGHLHNDHSSPHHNVG 235
CK C H H H+DHS H G
Sbjct: 573 CKENHSHCHGHDHHHHHHHDHSEHHQQSG 601
>08_01_0007 -
57681-57728,58260-58336,58418-58464,58808-58908,
59016-59108,59418-59540,59637-59755,60154-60510,
60888-61011
Length = 362
Score = 27.5 bits (58), Expect = 9.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = -3
Query: 294 HGSSHGHLHNDHSSPHHN 241
H +H H HN H+S +HN
Sbjct: 51 HNHNHNHNHNIHNSHNHN 68
>05_04_0299 -
19958776-19958858,19958883-19959012,19960131-19960175,
19960252-19960370,19960450-19960543,19961824-19961985,
19962117-19962266,19962472-19962537,19962934-19962981,
19963654-19963866,19963953-19964078,19964155-19964232,
19964600-19964671,19965522-19965953,19966863-19966925,
19967497-19967898
Length = 760
Score = 27.5 bits (58), Expect = 9.2
Identities = 12/27 (44%), Positives = 16/27 (59%)
Frame = +3
Query: 156 QIKVEDTKITKNFSCSECSVPEQNWLC 236
+I V D KI K+F + +PEQN C
Sbjct: 514 RIPVADYKIVKSFGEGDAELPEQNRSC 540
>04_04_1431 -
33551127-33551300,33551362-33551433,33551508-33551597,
33551671-33551715,33551785-33551880,33552245-33552296,
33552412-33552500,33552590-33552887,33553007-33553109,
33553328-33553352,33553503-33553763
Length = 434
Score = 27.5 bits (58), Expect = 9.2
Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)
Frame = +3
Query: 150 LEQIKVEDTKITKNFSCSECSVPEQNWLCLHCGVVNC-GRYVNGHAKNHADTLGHQLCIS 326
LE+ E ++ + S ++C+ EQ W H G+V+ R+V + + D +G C
Sbjct: 19 LERELKEKLRLRGDASPAKCTRQEQRWRSDH-GIVDARERFVQAYGRLRDDLVGDDSCEL 77
Query: 327 CDAYSVYCYKCDDY 368
D + + DY
Sbjct: 78 TDEARRWLAQMIDY 91
>01_07_0189 +
41875088-41875149,41875322-41875392,41875809-41875902,
41876285-41876360,41877130-41877293,41877428-41877605,
41877687-41877809,41877895-41877990,41878091-41878372
Length = 381
Score = 27.5 bits (58), Expect = 9.2
Identities = 10/31 (32%), Positives = 15/31 (48%)
Frame = +3
Query: 189 NFSCSECSVPEQNWLCLHCGVVNCGRYVNGH 281
N C++C P+ W+ L GV C + H
Sbjct: 62 NKICADCGAPDPKWVSLTFGVFICIKCSGAH 92
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,294,841
Number of Sequences: 37544
Number of extensions: 263603
Number of successful extensions: 1009
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 931
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 991
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1525730988
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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