Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4f06
(626 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U61954-2|ABS19469.1| 957|Caenorhabditis elegans Hypothetical pr... 72 3e-13
U61954-1|AAK29810.1| 955|Caenorhabditis elegans Hypothetical pr... 72 3e-13
AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical ... 69 2e-12
U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical pr... 59 3e-09
AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical ... 34 0.096
AL021447-4|CAB60285.3| 330|Caenorhabditis elegans Hypothetical ... 28 0.25
U50308-4|AAG24030.2| 483|Caenorhabditis elegans Amino acid tran... 31 0.51
AL132876-3|CAD21657.2| 746|Caenorhabditis elegans Hypothetical ... 31 0.67
Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical pr... 31 0.89
X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit ... 31 0.89
U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha nicot... 31 0.89
Z74031-10|CAA98450.1| 399|Caenorhabditis elegans Hypothetical p... 30 1.6
AL132862-26|CAB60561.1| 874|Caenorhabditis elegans Hypothetical... 30 1.6
U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine rece... 29 2.7
AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical ... 29 2.7
AF022978-7|AAG24177.2| 403|Caenorhabditis elegans Nuclear hormo... 29 2.7
U00049-3|AAC47059.1| 339|Caenorhabditis elegans Serpentine rece... 29 3.6
Z82261-2|CAB05145.1| 336|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z82261-1|CAB05144.1| 336|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z70312-6|CAA94387.1| 807|Caenorhabditis elegans Hypothetical pr... 28 4.8
Z70309-14|CAA94363.1| 807|Caenorhabditis elegans Hypothetical p... 28 4.8
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 28 4.8
L17337-2|AAP68929.1| 202|Caenorhabditis elegans Hypothetical pr... 28 4.8
AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical ... 28 4.8
AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical... 28 4.8
AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical... 28 4.8
AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin bet... 28 4.8
AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin bet... 28 4.8
Z92782-9|CAE17814.1| 329|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z81576-3|CAB04641.1| 534|Caenorhabditis elegans Hypothetical pr... 28 6.3
Z75549-2|CAA99916.1| 313|Caenorhabditis elegans Hypothetical pr... 28 6.3
AF067944-1|AAC17672.1| 237|Caenorhabditis elegans Hypothetical ... 28 6.3
AF039042-1|AAP40514.1| 368|Caenorhabditis elegans Serpentine re... 28 6.3
AF016414-5|AAG24020.1| 585|Caenorhabditis elegans Hypothetical ... 28 6.3
Z92826-1|CAB07320.1| 263|Caenorhabditis elegans Hypothetical pr... 27 8.3
Z54342-10|CAE17684.1| 131|Caenorhabditis elegans Hypothetical p... 27 8.3
U97009-1|AAC69030.2| 339|Caenorhabditis elegans Serpentine rece... 27 8.3
U28738-3|AAA68310.2| 468|Caenorhabditis elegans Hypothetical pr... 27 8.3
AL031627-21|CAA20970.1| 326|Caenorhabditis elegans Hypothetical... 27 8.3
>U61954-2|ABS19469.1| 957|Caenorhabditis elegans Hypothetical protein
F41H10.6c protein.
Length = 957
Score = 72.1 bits (169), Expect = 3e-13
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 150 LEQIK-VEDTKITKNFSCSECSVPEQNWLCLHCGVVNCGRYVNGHAKNHADTLGHQLCIS 326
L+++K + KI +CSEC + + W CL C NCGR+VN HA H + H + +S
Sbjct: 860 LKEVKPLPPAKINARTACSECQIGAEVWTCLTCYKYNCGRFVNEHAMMHHLSSSHPMALS 919
Query: 327 CDAYSVYCYKCDDYIIN 377
SV+CY CD Y+ N
Sbjct: 920 MADLSVWCYPCDSYVHN 936
>U61954-1|AAK29810.1| 955|Caenorhabditis elegans Hypothetical protein
F41H10.6b protein.
Length = 955
Score = 72.1 bits (169), Expect = 3e-13
Identities = 31/77 (40%), Positives = 44/77 (57%), Gaps = 1/77 (1%)
Frame = +3
Query: 150 LEQIK-VEDTKITKNFSCSECSVPEQNWLCLHCGVVNCGRYVNGHAKNHADTLGHQLCIS 326
L+++K + KI +CSEC + + W CL C NCGR+VN HA H + H + +S
Sbjct: 858 LKEVKPLPPAKINARTACSECQIGAEVWTCLTCYKYNCGRFVNEHAMMHHLSSSHPMALS 917
Query: 327 CDAYSVYCYKCDDYIIN 377
SV+CY CD Y+ N
Sbjct: 918 MADLSVWCYPCDSYVHN 934
>AL132902-8|CAC14423.2| 699|Caenorhabditis elegans Hypothetical
protein Y71A12B.9 protein.
Length = 699
Score = 69.3 bits (162), Expect = 2e-12
Identities = 29/77 (37%), Positives = 46/77 (59%)
Frame = +3
Query: 165 VEDTKITKNFSCSECSVPEQNWLCLHCGVVNCGRYVNGHAKNHADTLGHQLCISCDAYSV 344
V++ +I K F C EC ++ +CL CG + CGR +GHA +H + H + I C ++ +
Sbjct: 43 VKNQEIIKTF-CDECDNCNKSLMCLTCGRILCGRNDSGHALHHFEETSHPVVIDCISFEL 101
Query: 345 YCYKCDDYIINDTENNI 395
YCY CDD + D E ++
Sbjct: 102 YCYSCDDEVSLDFEPSL 118
>U23484-5|AAK93844.1| 590|Caenorhabditis elegans Hypothetical
protein EEED8.16 protein.
Length = 590
Score = 58.8 bits (136), Expect = 3e-09
Identities = 23/78 (29%), Positives = 37/78 (47%)
Frame = +3
Query: 165 VEDTKITKNFSCSECSVPEQNWLCLHCGVVNCGRYVNGHAKNHADTLGHQLCISCDAYSV 344
V+ ++ C++C + W+CL CG + CGRY HA+ H + H + V
Sbjct: 299 VQSPEVVAEQRCNDCGMSNDLWICLICGNIGCGRYAEQHAQRHWELTSHTYSLKVGGERV 358
Query: 345 YCYKCDDYIINDTENNID 398
+ Y D+Y+ EN D
Sbjct: 359 WDYAGDNYVHRLIENGAD 376
>AF040640-1|AAD34652.1| 602|Caenorhabditis elegans Hypothetical
protein F09D1.1 protein.
Length = 602
Score = 33.9 bits (74), Expect = 0.096
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 3/62 (4%)
Frame = +3
Query: 204 ECSVP--EQN-WLCLHCGVVNCGRYVNGHAKNHADTLGHQLCISCDAYSVYCYKCDDYII 374
+CSV QN + C+ CG GR N HA HA H + ++ YC D+Y +
Sbjct: 154 QCSVSLSHQNVYACMVCGKYFQGRGTNTHAYTHALETDHHVFLNLQTLKFYCLP-DNYEV 212
Query: 375 ND 380
D
Sbjct: 213 ID 214
>AL021447-4|CAB60285.3| 330|Caenorhabditis elegans Hypothetical
protein F19B2.8 protein.
Length = 330
Score = 27.9 bits (59), Expect(2) = 0.25
Identities = 10/36 (27%), Positives = 22/36 (61%)
Frame = -1
Query: 413 TLPYFIYIVLSIIYNVIITFVTIYRISITANAKLVS 306
T+P F++I+ +IY+ ++T +T I+ L++
Sbjct: 106 TIPQFLFIICILIYSQVLTILTYLTITFQLLVSLLA 141
Score = 23.4 bits (48), Expect(2) = 0.25
Identities = 12/35 (34%), Positives = 20/35 (57%)
Frame = -1
Query: 497 TVIFILSAIFLLFSTVLFFIILLPNPYNTLPYFIY 393
T++F + + F + V+FF ILL + YF+Y
Sbjct: 55 TILFPILSNF--YKVVIFFYILLTIGVSAALYFLY 87
>U50308-4|AAG24030.2| 483|Caenorhabditis elegans Amino acid
transporter protein 2 protein.
Length = 483
Score = 31.5 bits (68), Expect = 0.51
Identities = 25/96 (26%), Positives = 44/96 (45%), Gaps = 4/96 (4%)
Frame = -1
Query: 566 YISFNNIEHYI---IWSSDQTRYIGITVIFILSAI-FLLFSTVLFFIILLPNPYNTLPYF 399
++S +I++ + + QT+ I + F F FS + F L NP+ LP
Sbjct: 186 WLSLGHIDNLVMPDVAEGSQTKLSAIAMAFYSGVFSFSGFSYLNFVTEELKNPFRNLPRA 245
Query: 398 IYIVLSIIYNVIITFVTIYRISITANAKLVSECVSM 291
IYI + I+ V + Y +T + L S+ V++
Sbjct: 246 IYISIPIVTIVYMLVNIAYFSVLTVDEILDSDAVAI 281
>AL132876-3|CAD21657.2| 746|Caenorhabditis elegans Hypothetical
protein Y105E8A.3 protein.
Length = 746
Score = 31.1 bits (67), Expect = 0.67
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = -3
Query: 294 HGSSHGHLHNDHSSPHH 244
H HGH H+DHS HH
Sbjct: 730 HSHHHGHSHDDHSGHHH 746
>Z80220-5|CAB02308.1| 493|Caenorhabditis elegans Hypothetical
protein T08G11.5 protein.
Length = 493
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = -1
Query: 485 ILSAIFLLFSTVLFFII---LLPNPYNTLPYFI-YIVLSIIYNVIITFVTIYRISI 330
I I +L S V+F ++ +LP +T+P Y++L+ + NVI VT+ I++
Sbjct: 262 ITLTISVLLSIVVFLLLVSKILPPTSSTIPLMAKYLLLTFVLNVITILVTVIIINV 317
>X83888-1|CAA58765.1| 493|Caenorhabditis elegans beta-1 subunit of
nicotinic acetylcholinereceptor protein.
Length = 493
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = -1
Query: 485 ILSAIFLLFSTVLFFII---LLPNPYNTLPYFI-YIVLSIIYNVIITFVTIYRISI 330
I I +L S V+F ++ +LP +T+P Y++L+ + NVI VT+ I++
Sbjct: 262 ITLTISVLLSIVVFLLLVSKILPPTSSTIPLMAKYLLLTFVLNVITILVTVIIINV 317
>U81144-1|AAB39358.1| 493|Caenorhabditis elegans non-alpha
nicotinic acetylcholinereceptor subunit precursor
protein.
Length = 493
Score = 30.7 bits (66), Expect = 0.89
Identities = 18/56 (32%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
Frame = -1
Query: 485 ILSAIFLLFSTVLFFII---LLPNPYNTLPYFI-YIVLSIIYNVIITFVTIYRISI 330
I I +L S V+F ++ +LP +T+P Y++L+ + NVI VT+ I++
Sbjct: 262 ITLTISVLLSIVVFLLLVSKILPPTSSTIPLMAKYLLLTFVLNVITILVTVIIINV 317
>Z74031-10|CAA98450.1| 399|Caenorhabditis elegans Hypothetical
protein F32D8.10 protein.
Length = 399
Score = 29.9 bits (64), Expect = 1.6
Identities = 14/51 (27%), Positives = 30/51 (58%)
Frame = -1
Query: 482 LSAIFLLFSTVLFFIILLPNPYNTLPYFIYIVLSIIYNVIITFVTIYRISI 330
+S I ++F+T +FF+ + + P +Y++L +++V I F I +S+
Sbjct: 54 VSIISIVFNTFIFFVFVTNKQHRRSPN-LYLLLLSLFDVFIAFAYIAVMSV 103
>AL132862-26|CAB60561.1| 874|Caenorhabditis elegans Hypothetical
protein Y73F8A.33 protein.
Length = 874
Score = 29.9 bits (64), Expect = 1.6
Identities = 17/60 (28%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Frame = +3
Query: 129 HLLDNVKLEQIKVEDTK--ITKNFSCSECSVPEQNWLCLHCGVVNCGRYVNGHAKNHADT 302
H D V I D + +T+ CS C +P +++C H G +CG + + + DT
Sbjct: 788 HFADPVLDSDIHETDFESIVTEWLRCSTCKLPV-HFVCSHDGCPSCGGTLESYLPDEVDT 846
>U80030-2|AAG24161.2| 362|Caenorhabditis elegans Serpentine
receptor, class w protein121 protein.
Length = 362
Score = 29.1 bits (62), Expect = 2.7
Identities = 14/66 (21%), Positives = 36/66 (54%)
Frame = -1
Query: 452 VLFFIILLPNPYNTLPYFIYIVLSIIYNVIITFVTIYRISITANAKLVSECVSMVLRMAI 273
++FFI+ P + +I+++ +YN++ +I+ + IT N+ + + ++ +
Sbjct: 278 IMFFIVEFPYGLSIGTAWIFLLAPGVYNILNQLASIFSMLITLNS--CTHLIICLIMSSQ 335
Query: 272 YITTTV 255
Y +TT+
Sbjct: 336 YRSTTI 341
>AL132951-7|CAD89753.2| 608|Caenorhabditis elegans Hypothetical
protein Y67H2A.10 protein.
Length = 608
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
Frame = +3
Query: 204 ECSVPEQNWLCLHCGVVNCG-RYVNGHAKNHADTLGHQLCISCDAYSVYCYKCDD 365
EC PE N + C +V+C RY + A + H + +S DA S+ Y +D
Sbjct: 143 ECG-PENNEVRFRCAIVDCNKRYKSMFALRVHMKIVHNVVVSEDAKSLTNYPSED 196
>AF022978-7|AAG24177.2| 403|Caenorhabditis elegans Nuclear hormone
receptor familyprotein 131 protein.
Length = 403
Score = 29.1 bits (62), Expect = 2.7
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 3/58 (5%)
Frame = +3
Query: 195 SCSECSVPEQNWLCLHCGVVNCGRYVNGHAKNHADTLGHQL-CIS--CDAYSVYCYKC 359
SC C + QN H GV++C R + AD+ ++ C+S CD + +C C
Sbjct: 6 SCPPCIICGQNGQGHHFGVISC-RACAAFFRRAADSKWSRMKCLSKYCDGKTYHCKPC 62
>U00049-3|AAC47059.1| 339|Caenorhabditis elegans Serpentine
receptor, class g (gamma)protein 7 protein.
Length = 339
Score = 28.7 bits (61), Expect = 3.6
Identities = 11/57 (19%), Positives = 32/57 (56%)
Frame = -1
Query: 500 ITVIFILSAIFLLFSTVLFFIILLPNPYNTLPYFIYIVLSIIYNVIITFVTIYRISI 330
I ++++ +FLL ++ + P+ Y+ LPY+I + + ++I+ + ++ + +
Sbjct: 32 IQCLWLIPTLFLLVWIIITTRVRYPSQYSNLPYWI-LTADCVVSIILILLDLFVVRL 87
>Z82261-2|CAB05145.1| 336|Caenorhabditis elegans Hypothetical
protein C35D6.2 protein.
Length = 336
Score = 28.3 bits (60), Expect = 4.8
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -1
Query: 509 YIGITVIFILS-AIFLLFSTVLFFIILLPNPYNTLPYFIYIVLSIIY-NVIITFVTIY 342
YI +TV+FI AI ++ LF ILL NP Y Y L Y + TFV +Y
Sbjct: 101 YIIVTVVFITGCAIVVVVENRLF--ILLINP-QIWKYARYPFLGFFYFTAVATFVPVY 155
>Z82261-1|CAB05144.1| 336|Caenorhabditis elegans Hypothetical
protein C35D6.1 protein.
Length = 336
Score = 28.3 bits (60), Expect = 4.8
Identities = 23/58 (39%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Frame = -1
Query: 509 YIGITVIFILS-AIFLLFSTVLFFIILLPNPYNTLPYFIYIVLSIIY-NVIITFVTIY 342
YI +TV+FI AI ++ LF ILL NP Y Y L Y + TFV +Y
Sbjct: 101 YIIVTVVFITGCAIVVVVENRLF--ILLINP-QIWKYARYPFLGFFYFTAVATFVPVY 155
>Z70312-6|CAA94387.1| 807|Caenorhabditis elegans Hypothetical
protein ZC168.1 protein.
Length = 807
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/81 (23%), Positives = 42/81 (51%)
Frame = -1
Query: 518 QTRYIGITVIFILSAIFLLFSTVLFFIILLPNPYNTLPYFIYIVLSIIYNVIITFVTIYR 339
QT+ I + +F+++A F F+ + F++L+ N + + +L++++ +I+ V+ Y
Sbjct: 151 QTKRIELYRVFVVTAFFGTFAYIWVFLVLIVITPNVVDVW-EAILTLLFFIILVVVS-YA 208
Query: 338 ISITANAKLVSECVSMVLRMA 276
+ K S + L MA
Sbjct: 209 VDAQIWKKKKSSDLQEELEMA 229
>Z70309-14|CAA94363.1| 807|Caenorhabditis elegans Hypothetical
protein ZC168.1 protein.
Length = 807
Score = 28.3 bits (60), Expect = 4.8
Identities = 19/81 (23%), Positives = 42/81 (51%)
Frame = -1
Query: 518 QTRYIGITVIFILSAIFLLFSTVLFFIILLPNPYNTLPYFIYIVLSIIYNVIITFVTIYR 339
QT+ I + +F+++A F F+ + F++L+ N + + +L++++ +I+ V+ Y
Sbjct: 151 QTKRIELYRVFVVTAFFGTFAYIWVFLVLIVITPNVVDVW-EAILTLLFFIILVVVS-YA 208
Query: 338 ISITANAKLVSECVSMVLRMA 276
+ K S + L MA
Sbjct: 209 VDAQIWKKKKSSDLQEELEMA 229
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 28.3 bits (60), Expect = 4.8
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = +3
Query: 360 DDYIINDTENNIDKXXXXXXXXXXXNDEKQNSREKQEDSRQDEDD 494
DD ND + + K +D+K++ ++K++D +D+DD
Sbjct: 210 DDEDENDKKKDKKKKKDDKDDDENEDDKKKDKKKKKDDKEKDDDD 254
>L17337-2|AAP68929.1| 202|Caenorhabditis elegans Hypothetical
protein ZK686.5 protein.
Length = 202
Score = 28.3 bits (60), Expect = 4.8
Identities = 17/54 (31%), Positives = 27/54 (50%), Gaps = 5/54 (9%)
Frame = +3
Query: 135 LDNVKLEQIKVEDTKITKNFSCSECSVPEQNW-----LCLHCGVVNCGRYVNGH 281
+DN K ++ K K+T+ + C + EQN+ L LH G V+ Y+ H
Sbjct: 88 IDNEKQDREKAMKRKVTETIVTTYCELCEQNFSSSKMLLLHRGKVHNTPYIECH 141
>AL132948-1|CAC51077.1| 735|Caenorhabditis elegans Hypothetical
protein Y39B6A.1 protein.
Length = 735
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 297 QHGSSHGHLHNDHSSPHHN 241
+HG+ HGH H H SP H+
Sbjct: 486 EHGTHHGH-HGSHHSPAHH 503
Score = 28.3 bits (60), Expect = 4.8
Identities = 10/19 (52%), Positives = 13/19 (68%)
Frame = -3
Query: 297 QHGSSHGHLHNDHSSPHHN 241
+HG+ HGH H H SP H+
Sbjct: 544 EHGTHHGH-HGSHHSPAHH 561
>AL023828-18|CAA19462.2| 742|Caenorhabditis elegans Hypothetical
protein Y17G7B.15b protein.
Length = 742
Score = 28.3 bits (60), Expect = 4.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 177 KITKNFSCSECSVPEQNWLCLHCGVVNC 260
++ N C++C P W+ ++ GVV C
Sbjct: 371 RVPGNEVCADCGSPAPKWVSINLGVVLC 398
>AL023828-17|CAA19463.2| 826|Caenorhabditis elegans Hypothetical
protein Y17G7B.15a protein.
Length = 826
Score = 28.3 bits (60), Expect = 4.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 177 KITKNFSCSECSVPEQNWLCLHCGVVNC 260
++ N C++C P W+ ++ GVV C
Sbjct: 455 RVPGNEVCADCGSPAPKWVSINLGVVLC 482
>AJ132699-1|CAA10735.1| 742|Caenorhabditis elegans centaurin beta
1B protein.
Length = 742
Score = 28.3 bits (60), Expect = 4.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 177 KITKNFSCSECSVPEQNWLCLHCGVVNC 260
++ N C++C P W+ ++ GVV C
Sbjct: 371 RVPGNEVCADCGSPAPKWVSINLGVVLC 398
>AJ132698-1|CAA10734.1| 826|Caenorhabditis elegans centaurin beta
1A protein.
Length = 826
Score = 28.3 bits (60), Expect = 4.8
Identities = 9/28 (32%), Positives = 16/28 (57%)
Frame = +3
Query: 177 KITKNFSCSECSVPEQNWLCLHCGVVNC 260
++ N C++C P W+ ++ GVV C
Sbjct: 455 RVPGNEVCADCGSPAPKWVSINLGVVLC 482
>Z92782-9|CAE17814.1| 329|Caenorhabditis elegans Hypothetical
protein F14F8.12 protein.
Length = 329
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/46 (26%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Frame = -1
Query: 506 IGITVIFILSAIFLLFSTVLFFII-LLPNPYNTLPYFIYIVLSIIY 372
+G+TV+ A F+L +LF+I+ +L ++ + + + + S+ Y
Sbjct: 63 VGLTVVDYFIATFILLFIILFYILHILQQTFHVILFLLAVFNSLKY 108
>Z81576-3|CAB04641.1| 534|Caenorhabditis elegans Hypothetical
protein R10E8.4 protein.
Length = 534
Score = 27.9 bits (59), Expect = 6.3
Identities = 13/38 (34%), Positives = 21/38 (55%)
Frame = -2
Query: 238 RQSQFCSGTEHSEQLKFFVIFVSSTLICSNLTLSNKCS 125
R + CSG L+ F F+SS +CS+L+++ S
Sbjct: 72 RAERICSGDFMRSSLEHFRQFLSSVHVCSSLSITTGSS 109
>Z75549-2|CAA99916.1| 313|Caenorhabditis elegans Hypothetical
protein T19C4.2 protein.
Length = 313
Score = 27.9 bits (59), Expect = 6.3
Identities = 16/87 (18%), Positives = 41/87 (47%)
Frame = -1
Query: 500 ITVIFILSAIFLLFSTVLFFIILLPNPYNTLPYFIYIVLSIIYNVIITFVTIYRISITAN 321
IT+ +++ ++ L TV ++I+ +F++ +L + N + T +T Y + +++
Sbjct: 6 ITLFYLIPSMILYLITV--YVIIKHWKKFKSSFFVWYLLDFLMNTLTTGITFYTLKLSSV 63
Query: 320 AKLVSECVSMVLRMAIYITTTVHHTTM 240
S+ L + T + ++ M
Sbjct: 64 TCQTCALSSIYLMLENNFTLNIMYSLM 90
>AF067944-1|AAC17672.1| 237|Caenorhabditis elegans Hypothetical
protein K10C9.4 protein.
Length = 237
Score = 27.9 bits (59), Expect = 6.3
Identities = 14/44 (31%), Positives = 23/44 (52%)
Frame = -1
Query: 494 VIFILSAIFLLFSTVLFFIILLPNPYNTLPYFIYIVLSIIYNVI 363
V+ I+ I +FS L F++L + T + IYI I + +I
Sbjct: 11 VVIIIGTISAIFSGFLAFLVLRSEWFRTFQFLIYIPPLINFIII 54
>AF039042-1|AAP40514.1| 368|Caenorhabditis elegans Serpentine
receptor, class w protein103 protein.
Length = 368
Score = 27.9 bits (59), Expect = 6.3
Identities = 23/78 (29%), Positives = 38/78 (48%)
Frame = -1
Query: 488 FILSAIFLLFSTVLFFIILLPNPYNTLPYFIYIVLSIIYNVIITFVTIYRISITANAKLV 309
FILS I +L + I+ + + I I LSI ++ I T+Y+ + +
Sbjct: 30 FILSLISVLVNLAHITILCRKSMRTSATNVILIGLSIS-DMCIVMTTVYKHLFMIDFEN- 87
Query: 308 SECVSMVLRMAIYITTTV 255
S+C++ LR IY+ TV
Sbjct: 88 SDCMTSSLRWKIYVDMTV 105
>AF016414-5|AAG24020.1| 585|Caenorhabditis elegans Hypothetical
protein D1065.1 protein.
Length = 585
Score = 27.9 bits (59), Expect = 6.3
Identities = 12/47 (25%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = -1
Query: 530 WSSDQTRYIGITVIFILSAIF-LLFSTVLFFIILLPNPYNTLPYFIY 393
W S Q ++ ++ +L +F +L+ T + ++ PN N++ YF++
Sbjct: 77 WRS-QEMWLEYSIFGVLMYLFAILYFTYFYLFVIYPNIINSIIYFLH 122
>Z92826-1|CAB07320.1| 263|Caenorhabditis elegans Hypothetical
protein C18D11.1 protein.
Length = 263
Score = 27.5 bits (58), Expect = 8.3
Identities = 14/57 (24%), Positives = 26/57 (45%)
Frame = -1
Query: 524 SDQTRYIGITVIFILSAIFLLFSTVLFFIILLPNPYNTLPYFIYIVLSIIYNVIITF 354
S RY+ + + +L +L S VL + N + LP+ +++ I+ I F
Sbjct: 103 SASNRYVSLVIDILLYVSLVLASIVLLIGLCSYNQWLLLPWAFLMIIDIVRGFISVF 159
>Z54342-10|CAE17684.1| 131|Caenorhabditis elegans Hypothetical
protein C08H9.15 protein.
Length = 131
Score = 27.5 bits (58), Expect = 8.3
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = -1
Query: 500 ITVIFILSAIFLLFSTVLFFIILLPNPYNT 411
+T++ AI L+FS +L ++ P PY T
Sbjct: 90 LTIVGTCGAIILIFSVLLKMNLICPMPYTT 119
>U97009-1|AAC69030.2| 339|Caenorhabditis elegans Serpentine
receptor, class d (delta)protein 32 protein.
Length = 339
Score = 27.5 bits (58), Expect = 8.3
Identities = 16/68 (23%), Positives = 37/68 (54%), Gaps = 3/68 (4%)
Frame = -1
Query: 500 ITVIFILSAIFLLFSTVLFFIILLPNPYNTLPYFIYIVLSIIYNV---IITFVTIYRISI 330
I+ ++S + ++F+ L F+I +P PY +++ + I + I +T+ R+ I
Sbjct: 11 ISYAAVVSTLGIIFNGFLLFLIFFKSPSCLTPYTVFLANTSITQLGYCICFLLTVPRV-I 69
Query: 329 TANAKLVS 306
+ N ++V+
Sbjct: 70 SINLRIVN 77
>U28738-3|AAA68310.2| 468|Caenorhabditis elegans Hypothetical
protein T28D9.4 protein.
Length = 468
Score = 27.5 bits (58), Expect = 8.3
Identities = 18/74 (24%), Positives = 40/74 (54%), Gaps = 1/74 (1%)
Frame = -1
Query: 563 ISFNNIEHYIIWSSDQTRYIGITVIFILSAIF-LLFSTVLFFIILLPNPYNTLPYFIYIV 387
+S+ E +++ Y+ TV+F + A+F +F +LF +++ NP ++L + +
Sbjct: 366 VSYQTGEFIFSHTAEVKDYV-FTVMFTIIAVFRFVFIIILFKVLIYKNPPHSLTTTVLLK 424
Query: 386 LSIIYNVIITFVTI 345
+ N+ +TF +I
Sbjct: 425 PT---NIPVTFSSI 435
>AL031627-21|CAA20970.1| 326|Caenorhabditis elegans Hypothetical
protein Y102A5C.33 protein.
Length = 326
Score = 27.5 bits (58), Expect = 8.3
Identities = 17/51 (33%), Positives = 24/51 (47%)
Frame = -1
Query: 500 ITVIFILSAIFLLFSTVLFFIILLPNPYNTLPYFIYIVLSIIYNVIITFVT 348
+ V F+L L F L + + +Y+VL II NVII F+T
Sbjct: 153 LNVFFVLKDFICFAIYFLNFGKQLGDEIMNITLSVYLVLYIIVNVIICFLT 203
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,264,997
Number of Sequences: 27780
Number of extensions: 275946
Number of successful extensions: 1556
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 1331
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1545
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1374536540
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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