Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4f01
(735 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical pr... 42 5e-04
AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical ... 33 0.16
AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical ... 33 0.16
Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical pr... 33 0.28
AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein. 33 0.28
AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstrea... 33 0.28
Z36238-10|CAL63999.1| 287|Caenorhabditis elegans Hypothetical p... 31 0.64
Z36238-9|CAL63998.1| 335|Caenorhabditis elegans Hypothetical pr... 31 0.64
AF443191-1|AAL60201.1| 285|Caenorhabditis elegans X-box binding... 31 0.64
AF443190-1|AAL60200.1| 287|Caenorhabditis elegans X-box binding... 31 0.64
AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical ... 31 0.85
AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical ... 31 0.85
AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical ... 31 0.85
AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical ... 31 0.85
U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain (pr... 31 1.1
U37548-10|AAR30210.1| 1418|Caenorhabditis elegans Calcium channe... 31 1.1
U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel... 31 1.1
U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel... 31 1.1
U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel... 31 1.1
U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel... 31 1.1
AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltag... 31 1.1
AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calciu... 31 1.1
AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calciu... 31 1.1
AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calciu... 31 1.1
AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-depen... 31 1.1
AF045644-1|AAC02601.1| 543|Caenorhabditis elegans Hypothetical ... 30 1.5
Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical pr... 30 2.0
Z54327-13|CAE48494.1| 619|Caenorhabditis elegans Hypothetical p... 30 2.0
Z54307-9|CAE48498.1| 619|Caenorhabditis elegans Hypothetical pr... 30 2.0
X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomera... 30 2.0
Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical pr... 29 2.6
Z49908-4|CAA90095.1| 535|Caenorhabditis elegans Hypothetical pr... 29 2.6
AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 2.6
AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 2.6
AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A prote... 29 2.6
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 2.6
Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z81069-8|CAB02996.2| 600|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical pr... 29 4.5
AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical... 29 4.5
AL132948-25|CAC51048.1| 438|Caenorhabditis elegans Hypothetical... 29 4.5
AL021448-4|CAA16278.2| 600|Caenorhabditis elegans Hypothetical ... 29 4.5
AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans Prion-like-(q... 29 4.5
AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical ... 29 4.5
AC006714-5|AAN84811.1| 224|Caenorhabditis elegans Hypothetical ... 29 4.5
Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical pr... 28 6.0
AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical... 28 6.0
AF025464-4|AAB71017.3| 310|Caenorhabditis elegans Mnat (menage ... 28 6.0
Z74039-7|CAA98506.1| 290|Caenorhabditis elegans Hypothetical pr... 28 7.9
AF100659-3|AAC68969.2| 334|Caenorhabditis elegans Serpentine re... 28 7.9
>Z81066-5|CAB02969.1| 777|Caenorhabditis elegans Hypothetical
protein F17B5.1a protein.
Length = 777
Score = 41.9 bits (94), Expect = 5e-04
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Frame = +1
Query: 502 DEAKRKDFLCGFRKRKLERKKKA-QEDLQRLLKEEKRRIKQENKRILQKTSC-FQSSFT 672
+E K+K+ L RK + E+KKKA +E+ +R + EEK R KQE +R Q C F +FT
Sbjct: 583 EERKKKEELEIKRKAEEEKKKKALEEEKKRKIAEEKARQKQEKERKKQANKCTFLQNFT 641
>AC084152-4|AAR85899.1| 753|Caenorhabditis elegans Hypothetical
protein Y102A11A.2b protein.
Length = 753
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +1
Query: 541 KRKLERKKKAQEDLQRLLKEEKRRIKQENK 630
+ KLE KKKA+++ +R +EE+RRI++ K
Sbjct: 490 RAKLEAKKKAEQEKERAKREEQRRIEEAAK 519
>AC084152-3|AAK39314.2| 772|Caenorhabditis elegans Hypothetical
protein Y102A11A.2a protein.
Length = 772
Score = 33.5 bits (73), Expect = 0.16
Identities = 14/30 (46%), Positives = 23/30 (76%)
Frame = +1
Query: 541 KRKLERKKKAQEDLQRLLKEEKRRIKQENK 630
+ KLE KKKA+++ +R +EE+RRI++ K
Sbjct: 490 RAKLEAKKKAEQEKERAKREEQRRIEEAAK 519
>Z81586-9|CAB04699.2| 676|Caenorhabditis elegans Hypothetical
protein T05F1.11 protein.
Length = 676
Score = 32.7 bits (71), Expect = 0.28
Identities = 17/35 (48%), Positives = 24/35 (68%), Gaps = 3/35 (8%)
Frame = +1
Query: 538 RKRKLERKKKAQEDLQRLLKEEK---RRIKQENKR 633
RK++ ERKKK +ED +R EE R++K+E KR
Sbjct: 438 RKKEEERKKKEEEDEKRRKAEESERVRKLKEEEKR 472
>AF400666-1|AAL28025.1| 481|Caenorhabditis elegans CUX-7 protein.
Length = 481
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/37 (32%), Positives = 26/37 (70%)
Frame = +1
Query: 538 RKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKT 648
R+ ERK++ + +L+R+ +EEK+R+++E Q++
Sbjct: 313 RREDRERKRREKRELERMAEEEKKRLEKERLEAEQRS 349
>AC006605-6|AAK85446.2| 495|Caenorhabditis elegans Clk-2 upstream,
human gene xe7related protein 7 protein.
Length = 495
Score = 32.7 bits (71), Expect = 0.28
Identities = 12/37 (32%), Positives = 26/37 (70%)
Frame = +1
Query: 538 RKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKT 648
R+ ERK++ + +L+R+ +EEK+R+++E Q++
Sbjct: 313 RREDRERKRREKRELERMAEEEKKRLEKERLEAEQRS 349
>Z36238-10|CAL63999.1| 287|Caenorhabditis elegans Hypothetical
protein R74.3b protein.
Length = 287
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 538 RKRKLERKKKAQEDLQRLLKEEKRRIKQENKRI 636
R +K ER K ED+ R L EE RR++ EN+R+
Sbjct: 79 RDKKKERSAKI-EDVMRDLVEENRRLRAENERL 110
>Z36238-9|CAL63998.1| 335|Caenorhabditis elegans Hypothetical
protein R74.3a protein.
Length = 335
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 538 RKRKLERKKKAQEDLQRLLKEEKRRIKQENKRI 636
R +K ER K ED+ R L EE RR++ EN+R+
Sbjct: 79 RDKKKERSAKI-EDVMRDLVEENRRLRAENERL 110
>AF443191-1|AAL60201.1| 285|Caenorhabditis elegans X-box binding
protein processedisoform protein.
Length = 285
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 538 RKRKLERKKKAQEDLQRLLKEEKRRIKQENKRI 636
R +K ER K ED+ R L EE RR++ EN+R+
Sbjct: 79 RDKKKERSAKI-EDVMRDLVEENRRLRAENERL 110
>AF443190-1|AAL60200.1| 287|Caenorhabditis elegans X-box binding
protein unprocessedisoform protein.
Length = 287
Score = 31.5 bits (68), Expect = 0.64
Identities = 16/33 (48%), Positives = 22/33 (66%)
Frame = +1
Query: 538 RKRKLERKKKAQEDLQRLLKEEKRRIKQENKRI 636
R +K ER K ED+ R L EE RR++ EN+R+
Sbjct: 79 RDKKKERSAKI-EDVMRDLVEENRRLRAENERL 110
>AF045641-4|AAO91715.1| 332|Caenorhabditis elegans Hypothetical
protein F53H1.4b protein.
Length = 332
Score = 31.1 bits (67), Expect = 0.85
Identities = 13/47 (27%), Positives = 31/47 (65%)
Frame = +1
Query: 505 EAKRKDFLCGFRKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQK 645
+ K K+ L +K + E+K+K +E+ + LKE++ ++K++ ++ +K
Sbjct: 208 DEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARK 254
>AF045641-3|AAO91716.1| 368|Caenorhabditis elegans Hypothetical
protein F53H1.4c protein.
Length = 368
Score = 31.1 bits (67), Expect = 0.85
Identities = 13/47 (27%), Positives = 31/47 (65%)
Frame = +1
Query: 505 EAKRKDFLCGFRKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQK 645
+ K K+ L +K + E+K+K +E+ + LKE++ ++K++ ++ +K
Sbjct: 244 DEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARK 290
>AF045641-2|AAC02578.2| 1370|Caenorhabditis elegans Hypothetical
protein F53H1.4a protein.
Length = 1370
Score = 31.1 bits (67), Expect = 0.85
Identities = 13/47 (27%), Positives = 31/47 (65%)
Frame = +1
Query: 505 EAKRKDFLCGFRKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQK 645
+ K K+ L +K + E+K+K +E+ + LKE++ ++K++ ++ +K
Sbjct: 244 DEKEKEKLEKKQKEQEEKKQKKEEEKAKKLKEKEEKLKEKEEKAARK 290
>AF002197-6|AAD34661.1| 446|Caenorhabditis elegans Hypothetical
protein F20H11.4 protein.
Length = 446
Score = 31.1 bits (67), Expect = 0.85
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Frame = +1
Query: 520 DFLCGFRKRKL-ERKKKAQEDLQRLLKEEKRRIKQENKRILQKTS 651
DF F K+ L ERKKK + + + KEEKR+ + N + +K++
Sbjct: 393 DFYTEFMKKVLMERKKKDEAEKAKKEKEEKRKRDEANDKTNEKSA 437
>U70854-5|AAB09157.1| 589|Caenorhabditis elegans Dnaj domain
(prokaryotic heat shockprotein) protein 11 protein.
Length = 589
Score = 30.7 bits (66), Expect = 1.1
Identities = 12/32 (37%), Positives = 22/32 (68%)
Frame = +1
Query: 535 FRKRKLERKKKAQEDLQRLLKEEKRRIKQENK 630
F+K + +K KA+ED QR ++E++ I +E +
Sbjct: 293 FKKEQQAKKDKAKEDKQRAIREKQEAIDREKR 324
>U37548-10|AAR30210.1| 1418|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform f protein.
Length = 1418
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 532 GFRKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKTS 651
GF++ K E K++ +ED ++ EE+ K+E + I+ KT+
Sbjct: 881 GFQESKEEEKRQLEEDARKQAVEEEDERKRELELIIAKTT 920
>U37548-9|AAR25651.1| 1852|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform c protein.
Length = 1852
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 532 GFRKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKTS 651
GF++ K E K++ +ED ++ EE+ K+E + I+ KT+
Sbjct: 881 GFQESKEEEKRQLEEDARKQAVEEEDERKRELELIIAKTT 920
>U37548-8|AAM51534.1| 1837|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform a protein.
Length = 1837
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 532 GFRKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKTS 651
GF++ K E K++ +ED ++ EE+ K+E + I+ KT+
Sbjct: 881 GFQESKEEEKRQLEEDARKQAVEEEDERKRELELIIAKTT 920
>U37548-7|AAR25652.1| 1885|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform d protein.
Length = 1885
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 532 GFRKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKTS 651
GF++ K E K++ +ED ++ EE+ K+E + I+ KT+
Sbjct: 929 GFQESKEEEKRQLEEDARKQAVEEEDERKRELELIIAKTT 968
>U37548-6|AAR25653.1| 1844|Caenorhabditis elegans Calcium channel,
alpha subunitprotein 1, isoform e protein.
Length = 1844
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 532 GFRKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKTS 651
GF++ K E K++ +ED ++ EE+ K+E + I+ KT+
Sbjct: 888 GFQESKEEEKRQLEEDARKQAVEEEDERKRELELIIAKTT 927
>AY322480-1|AAP84337.1| 1844|Caenorhabditis elegans T-type voltage
sensitive calciumchannel alpha1 subunit isoform D
protein.
Length = 1844
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 532 GFRKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKTS 651
GF++ K E K++ +ED ++ EE+ K+E + I+ KT+
Sbjct: 888 GFQESKEEEKRQLEEDARKQAVEEEDERKRELELIIAKTT 927
>AY313900-1|AAP79883.1| 1852|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform C protein.
Length = 1852
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 532 GFRKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKTS 651
GF++ K E K++ +ED ++ EE+ K+E + I+ KT+
Sbjct: 881 GFQESKEEEKRQLEEDARKQAVEEEDERKRELELIIAKTT 920
>AY313899-1|AAP79882.1| 1885|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform B protein.
Length = 1885
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 532 GFRKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKTS 651
GF++ K E K++ +ED ++ EE+ K+E + I+ KT+
Sbjct: 929 GFQESKEEEKRQLEEDARKQAVEEEDERKRELELIIAKTT 968
>AY313898-1|AAP79881.1| 1837|Caenorhabditis elegans T-type calcium
channel alpha1 subunitisoform A protein.
Length = 1837
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 532 GFRKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKTS 651
GF++ K E K++ +ED ++ EE+ K+E + I+ KT+
Sbjct: 881 GFQESKEEEKRQLEEDARKQAVEEEDERKRELELIIAKTT 920
>AF368920-1|AAK53427.1| 1837|Caenorhabditis elegans voltage-dependent
calcium channelalpha13 subunit protein.
Length = 1837
Score = 30.7 bits (66), Expect = 1.1
Identities = 14/40 (35%), Positives = 26/40 (65%)
Frame = +1
Query: 532 GFRKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKTS 651
GF++ K E K++ +ED ++ EE+ K+E + I+ KT+
Sbjct: 881 GFQESKEEEKRQLEEDARKQAVEEEDERKRELELIIAKTT 920
>AF045644-1|AAC02601.1| 543|Caenorhabditis elegans Hypothetical
protein F57H12.5 protein.
Length = 543
Score = 30.3 bits (65), Expect = 1.5
Identities = 15/43 (34%), Positives = 30/43 (69%)
Frame = +1
Query: 538 RKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKTSCFQSS 666
R+R+ +RK++ +E+ + KEEK+ K+E K+ ++K C ++S
Sbjct: 133 RERQEDRKEERKENKREDKKEEKKEEKKEEKKEVRK-DCRENS 174
Score = 29.5 bits (63), Expect = 2.6
Identities = 14/38 (36%), Positives = 24/38 (63%)
Frame = +1
Query: 544 RKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKTSCF 657
RK ERK+ +ED + KEEK+ K+E ++ ++ S +
Sbjct: 139 RKEERKENKREDKKEEKKEEKKEEKKEVRKDCRENSVY 176
>Z93385-4|CAB07640.1| 806|Caenorhabditis elegans Hypothetical
protein M01E5.5a protein.
Length = 806
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/36 (38%), Positives = 26/36 (72%)
Frame = +1
Query: 538 RKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQK 645
RK K RKK+ +E +R +EK+R+++EN++I ++
Sbjct: 157 RKEKERRKKEKREKKER---KEKKRLEKENRKIKEE 189
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +1
Query: 502 DEAKRKDFLCGFRKRKLERKKKAQEDLQRLLKEEKRRIKQEN 627
+E KRK+ R++K +R+KK +++ +RL KE R+IK+E+
Sbjct: 153 EEQKRKE---KERRKKEKREKKERKEKKRLEKEN-RKIKEED 190
>Z54327-13|CAE48494.1| 619|Caenorhabditis elegans Hypothetical
protein F14F11.1h protein.
Length = 619
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 191 AKRYRNNLTLLETTFVTLKFVCILFA---DFRLPTCQISTTH**FSVIVIGLKNHNI 352
+ +Y ++++ FV + VC FR+P ISTT FS + G++ +NI
Sbjct: 260 SSKYARVISVVNIIFVIISIVCFCLKTHPSFRIPDIDISTTMGNFSAPLNGVQMNNI 316
>Z54307-9|CAE48498.1| 619|Caenorhabditis elegans Hypothetical
protein F14F11.1h protein.
Length = 619
Score = 29.9 bits (64), Expect = 2.0
Identities = 17/57 (29%), Positives = 29/57 (50%), Gaps = 3/57 (5%)
Frame = +2
Query: 191 AKRYRNNLTLLETTFVTLKFVCILFA---DFRLPTCQISTTH**FSVIVIGLKNHNI 352
+ +Y ++++ FV + VC FR+P ISTT FS + G++ +NI
Sbjct: 260 SSKYARVISVVNIIFVIISIVCFCLKTHPSFRIPDIDISTTMGNFSAPLNGVQMNNI 316
>X96762-1|CAA65537.1| 806|Caenorhabditis elegans DNA topoisomerase
protein.
Length = 806
Score = 29.9 bits (64), Expect = 2.0
Identities = 14/48 (29%), Positives = 33/48 (68%)
Frame = +1
Query: 502 DEAKRKDFLCGFRKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQK 645
DEA D ++++ ER+KK + + ++ ++EK+R+++EN++I ++
Sbjct: 144 DEAPTTDDEEEQKRKEKERRKKEKREKKK--RKEKKRLEKENRKIKEE 189
Score = 29.1 bits (62), Expect = 3.4
Identities = 17/42 (40%), Positives = 30/42 (71%)
Frame = +1
Query: 502 DEAKRKDFLCGFRKRKLERKKKAQEDLQRLLKEEKRRIKQEN 627
+E KRK+ R++K +R+KK +++ +RL KE R+IK+E+
Sbjct: 153 EEQKRKE---KERRKKEKREKKKRKEKKRLEKEN-RKIKEED 190
>Z93398-8|CAJ80823.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +1
Query: 538 RKRKLERKKKAQ--EDLQRLLKEEKRRIKQENKR 633
R+R+ E +K+ Q ED +R +EE+RR ++E KR
Sbjct: 1431 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKR 1464
>Z93398-5|CAD90186.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +1
Query: 538 RKRKLERKKKAQ--EDLQRLLKEEKRRIKQENKR 633
R+R+ E +K+ Q ED +R +EE+RR ++E KR
Sbjct: 1443 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKR 1476
>Z93398-2|CAH04741.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +1
Query: 538 RKRKLERKKKAQ--EDLQRLLKEEKRRIKQENKR 633
R+R+ E +K+ Q ED +R +EE+RR ++E KR
Sbjct: 1330 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKR 1363
>Z93398-1|CAH04740.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +1
Query: 538 RKRKLERKKKAQ--EDLQRLLKEEKRRIKQENKR 633
R+R+ E +K+ Q ED +R +EE+RR ++E KR
Sbjct: 1412 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKR 1445
>Z92788-8|CAJ80815.1| 3424|Caenorhabditis elegans Hypothetical protein
ZK1151.1h protein.
Length = 3424
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +1
Query: 538 RKRKLERKKKAQ--EDLQRLLKEEKRRIKQENKR 633
R+R+ E +K+ Q ED +R +EE+RR ++E KR
Sbjct: 1431 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKR 1464
>Z92788-5|CAD90175.2| 3436|Caenorhabditis elegans Hypothetical protein
ZK1151.1a protein.
Length = 3436
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +1
Query: 538 RKRKLERKKKAQ--EDLQRLLKEEKRRIKQENKR 633
R+R+ E +K+ Q ED +R +EE+RR ++E KR
Sbjct: 1443 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKR 1476
>Z92788-2|CAH04709.1| 3323|Caenorhabditis elegans Hypothetical protein
ZK1151.1e protein.
Length = 3323
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +1
Query: 538 RKRKLERKKKAQ--EDLQRLLKEEKRRIKQENKR 633
R+R+ E +K+ Q ED +R +EE+RR ++E KR
Sbjct: 1330 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKR 1363
>Z92788-1|CAH04708.1| 3405|Caenorhabditis elegans Hypothetical protein
ZK1151.1d protein.
Length = 3405
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +1
Query: 538 RKRKLERKKKAQ--EDLQRLLKEEKRRIKQENKR 633
R+R+ E +K+ Q ED +R +EE+RR ++E KR
Sbjct: 1412 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKR 1445
>Z49908-4|CAA90095.1| 535|Caenorhabditis elegans Hypothetical
protein C07E3.4 protein.
Length = 535
Score = 29.5 bits (63), Expect = 2.6
Identities = 19/59 (32%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Frame = +1
Query: 493 LVFDEAKRKDFLCGFRKRKL-ERKKKAQEDLQRLLKEEKRRIKQENKRILQKTSCFQSS 666
L+ E K+++ K K E K++ +ED + KEEK+ K+E K+ ++K C ++S
Sbjct: 109 LMMIEIKKEELKEKKEKEKTDEEKRERKEDKREDKKEEKKEDKKEEKKEVRK-DCRENS 166
>AJ505904-1|CAD44515.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +1
Query: 538 RKRKLERKKKAQ--EDLQRLLKEEKRRIKQENKR 633
R+R+ E +K+ Q ED +R +EE+RR ++E KR
Sbjct: 1443 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKR 1476
>AJ505903-1|CAD44514.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +1
Query: 538 RKRKLERKKKAQ--EDLQRLLKEEKRRIKQENKR 633
R+R+ E +K+ Q ED +R +EE+RR ++E KR
Sbjct: 1443 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKR 1476
>AJ505815-1|CAD44323.1| 3436|Caenorhabditis elegans VAB-10A protein
protein.
Length = 3436
Score = 29.5 bits (63), Expect = 2.6
Identities = 15/34 (44%), Positives = 24/34 (70%), Gaps = 2/34 (5%)
Frame = +1
Query: 538 RKRKLERKKKAQ--EDLQRLLKEEKRRIKQENKR 633
R+R+ E +K+ Q ED +R +EE+RR ++E KR
Sbjct: 1443 RRREAEDRKRRQDEEDRRRREEEERRRREEEEKR 1476
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 2.6
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +1
Query: 541 KRKLERKKKAQEDLQRLLKEEKRRIKQENKR 633
K + +KKK +E+ +R KEE+++ K+E +R
Sbjct: 119 KEEEMKKKKEKEEEERRAKEERKKAKKEKQR 149
>Z78546-6|CAB54307.1| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/44 (29%), Positives = 29/44 (65%)
Frame = +1
Query: 538 RKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKTSCFQSSF 669
++ K+E +KK +E+L++ K+ + +Q +R+ ++ S + SSF
Sbjct: 305 QRMKIEVQKKMEEELRKKEKQLEEEKQQMEQRLKEQLSNWHSSF 348
>Z78545-5|CAB01764.2| 642|Caenorhabditis elegans Hypothetical
protein M03B6.3 protein.
Length = 642
Score = 29.1 bits (62), Expect = 3.4
Identities = 13/44 (29%), Positives = 29/44 (65%)
Frame = +1
Query: 538 RKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKTSCFQSSF 669
++ K+E +KK +E+L++ K+ + +Q +R+ ++ S + SSF
Sbjct: 305 QRMKIEVQKKMEEELRKKEKQLEEEKQQMEQRLKEQLSNWHSSF 348
>Z46792-4|CAA86767.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 541 KRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKTSCFQS 663
+ +E KKK E L+ LLKE ++RIK+ R + F++
Sbjct: 503 RESIEEKKKIVE-LEELLKETEKRIKESEHRRREDQKKFEA 542
>Z46791-8|CAA86762.2| 1531|Caenorhabditis elegans Hypothetical
protein C09G5.8 protein.
Length = 1531
Score = 29.1 bits (62), Expect = 3.4
Identities = 15/41 (36%), Positives = 24/41 (58%)
Frame = +1
Query: 541 KRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKTSCFQS 663
+ +E KKK E L+ LLKE ++RIK+ R + F++
Sbjct: 503 RESIEEKKKIVE-LEELLKETEKRIKESEHRRREDQKKFEA 542
>Z81069-8|CAB02996.2| 600|Caenorhabditis elegans Hypothetical
protein Y2H9A.4 protein.
Length = 600
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 505 EAKRKDFLCGFRKRKLERKKKAQEDLQRLLKEEKRRI 615
+ K ++ L R+ + ERK++AQE+L+ L E + R+
Sbjct: 383 QLKNEEELKKKRQEREERKRQAQEELKNLKSESRARL 419
>Z19152-2|CAA79544.1| 1150|Caenorhabditis elegans Hypothetical
protein B0464.2 protein.
Length = 1150
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/50 (36%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Frame = +1
Query: 490 TLVFDEAKRKDFLCGFRKRKLERKKKAQEDLQRLL-KEEKRRIKQENKRI 636
T+ +EAK L K KL + E+ +RL+ K+EK +I +NK I
Sbjct: 845 TICAEEAKNCKDLLTQAKHKLAAAQTQDEEERRLMEKQEKEKIALQNKMI 894
>AL132952-19|CAB63382.2| 1677|Caenorhabditis elegans Hypothetical
protein Y51H4A.12 protein.
Length = 1677
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 505 EAKRKDFLCGFRKRKLERKKKAQEDLQRLLKEEKRRIKQENKR 633
E++R+ F R R ++ KK+ E+ +R EE+RR+++E +R
Sbjct: 1121 ESERRRFAAE-RHRAMDHKKREAEEARRA-DEERRRLEEEVRR 1161
>AL132948-25|CAC51048.1| 438|Caenorhabditis elegans Hypothetical
protein Y39B6A.33 protein.
Length = 438
Score = 28.7 bits (61), Expect = 4.5
Identities = 15/31 (48%), Positives = 23/31 (74%)
Frame = +1
Query: 538 RKRKLERKKKAQEDLQRLLKEEKRRIKQENK 630
R K ++KKKA+ Q+L KEEKRR++++ K
Sbjct: 284 RMTKEQKKKKAKA--QKLDKEEKRRLEEKAK 312
>AL021448-4|CAA16278.2| 600|Caenorhabditis elegans Hypothetical
protein Y2H9A.4 protein.
Length = 600
Score = 28.7 bits (61), Expect = 4.5
Identities = 13/37 (35%), Positives = 24/37 (64%)
Frame = +1
Query: 505 EAKRKDFLCGFRKRKLERKKKAQEDLQRLLKEEKRRI 615
+ K ++ L R+ + ERK++AQE+L+ L E + R+
Sbjct: 383 QLKNEEELKKKRQEREERKRQAQEELKNLKSESRARL 419
>AC024781-3|AAK39330.2| 2203|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 85
protein.
Length = 2203
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Frame = +1
Query: 502 DEAKRKDFLCGFRKRKLERKKKAQEDLQRLLKEEKR-RIKQENKRILQ 642
+E KRK L RKR E K+ + +RLL+E++R R + E +R+ +
Sbjct: 203 EERKRKQELEEQRKRNEELKRLRIAEEKRLLEEQQRLREQMERERLAE 250
>AC006714-6|AAN84810.2| 339|Caenorhabditis elegans Hypothetical
protein Y119D3B.12a protein.
Length = 339
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 517 KDFLCGFRKRKLERKKKAQEDLQRLLKEEKRRI 615
K + GF KR LER ++ ED++R +++ + R+
Sbjct: 76 KKWRMGFEKRFLERIRRIHEDVRRKIQKHEDRL 108
>AC006714-5|AAN84811.1| 224|Caenorhabditis elegans Hypothetical
protein Y119D3B.12b protein.
Length = 224
Score = 28.7 bits (61), Expect = 4.5
Identities = 12/33 (36%), Positives = 22/33 (66%)
Frame = +1
Query: 517 KDFLCGFRKRKLERKKKAQEDLQRLLKEEKRRI 615
K + GF KR LER ++ ED++R +++ + R+
Sbjct: 76 KKWRMGFEKRFLERIRRIHEDVRRKIQKHEDRL 108
>Z27079-1|CAA81593.2| 411|Caenorhabditis elegans Hypothetical
protein T05G5.1 protein.
Length = 411
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/43 (34%), Positives = 26/43 (60%), Gaps = 2/43 (4%)
Frame = +1
Query: 502 DEAKRKDF--LCGFRKRKLERKKKAQEDLQRLLKEEKRRIKQE 624
D+A+R+D + ++ ER +K +ED +R EE+RR + E
Sbjct: 100 DDARRRDDERKREYERQVAERTRKEKEDRERASDEERRRQQHE 142
>AF038614-10|AAB92063.1| 1655|Caenorhabditis elegans Hypothetical
protein F15E6.1 protein.
Length = 1655
Score = 28.3 bits (60), Expect = 6.0
Identities = 15/43 (34%), Positives = 28/43 (65%)
Frame = +1
Query: 505 EAKRKDFLCGFRKRKLERKKKAQEDLQRLLKEEKRRIKQENKR 633
E++R+ F R R ++ KK+ E+ +R EE+RR+++E +R
Sbjct: 1113 ESERRRFAAE-RHRAMDHKKQEAEEARRA-DEERRRLEEEVRR 1153
>AF025464-4|AAB71017.3| 310|Caenorhabditis elegans Mnat (menage a
trois) tfiih subunitprotein 1 protein.
Length = 310
Score = 28.3 bits (60), Expect = 6.0
Identities = 13/30 (43%), Positives = 22/30 (73%)
Frame = +1
Query: 553 ERKKKAQEDLQRLLKEEKRRIKQENKRILQ 642
ERKK+ +++L+ KEE+ + K+ NK +LQ
Sbjct: 200 ERKKQIEKELEE--KEEQEKRKRRNKEMLQ 227
>Z74039-7|CAA98506.1| 290|Caenorhabditis elegans Hypothetical
protein K03B8.7 protein.
Length = 290
Score = 27.9 bits (59), Expect = 7.9
Identities = 13/38 (34%), Positives = 23/38 (60%)
Frame = +1
Query: 538 RKRKLERKKKAQEDLQRLLKEEKRRIKQENKRILQKTS 651
R ++ E + E L++L+KE RR + +KR +QK +
Sbjct: 202 RHKRAETENCNDEKLRKLIKENIRRDAKSSKREIQKAA 239
>AF100659-3|AAC68969.2| 334|Caenorhabditis elegans Serpentine
receptor, class z protein23 protein.
Length = 334
Score = 27.9 bits (59), Expect = 7.9
Identities = 9/20 (45%), Positives = 15/20 (75%)
Frame = +1
Query: 127 LYYIGLFVFLAYQSVIFPYF 186
LY+I +FVFL ++FP++
Sbjct: 18 LYFISVFVFLVIYLILFPFY 37
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,743,955
Number of Sequences: 27780
Number of extensions: 227255
Number of successful extensions: 1266
Number of sequences better than 10.0: 60
Number of HSP's better than 10.0 without gapping: 965
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1234
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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