Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4e19
         (588 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_01_0024 - 164618-165139,166884-166949,167046-167216,167321-16...    45   4e-05
03_06_0603 + 34999083-34999703,35000092-35000177,35000400-350007...    32   0.30 
10_08_0505 + 18384392-18384454,18384593-18384679,18385878-183864...    27   8.4  
03_05_1143 + 30709825-30709926,30710105-30710260,30710356-307104...    27   8.4  
01_06_1178 + 35149700-35150238,35151064-35151385,35151787-35152038     27   8.4  

>05_01_0024 -
           164618-165139,166884-166949,167046-167216,167321-167422,
           167538-167600,167679-167825,168234-168359,168742-168921,
           169183-169322,169688-169861,170096-170123
          Length = 572

 Score = 45.2 bits (102), Expect = 4e-05
 Identities = 18/38 (47%), Positives = 23/38 (60%)
 Frame = +1

Query: 268 PCFQMRTKMIQCYTENPHQPLKCSEAVQAFSNCVAYSR 381
           PC + R+   QCY  N   PLKC+EAV+ F  CV  +R
Sbjct: 526 PCTEERSNCRQCYVSNAQDPLKCAEAVKRFEACVRLAR 563


>03_06_0603 +
           34999083-34999703,35000092-35000177,35000400-35000796,
           35000906-35001154,35001522-35001749,35002524-35002973,
           35003848-35003961,35004171-35004216,35004408-35004574
          Length = 785

 Score = 32.3 bits (70), Expect = 0.30
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 4/55 (7%)
 Frame = +1

Query: 103 QQGDGDYWS----WRVENLKKEHQLINQIIETEYEKKINSINSICEPPKVTHEKL 255
           +Q +GD++S    WR+E L  +H L+  ++ET+  K      SI E  +V +E L
Sbjct: 481 EQVEGDFYSFKGKWRLEQLGDQHTLLKYMVETKMHKDTFLSESILE--EVIYEDL 533


>10_08_0505 +
           18384392-18384454,18384593-18384679,18385878-18386409,
           18387042-18387564,18387734-18387791
          Length = 420

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 11/30 (36%), Positives = 16/30 (53%)
 Frame = +1

Query: 115 GDYWSWRVENLKKEHQLINQIIETEYEKKI 204
           G YWSW   +   E+QL  +  + E  KK+
Sbjct: 358 GVYWSWNNNSASFENQLSEEASDPEKAKKV 387


>03_05_1143 +
           30709825-30709926,30710105-30710260,30710356-30710439,
           30710769-30710882,30711019-30711111,30711888-30711977,
           30712157-30712227,30712300-30712374,30712481-30712568,
           30712748-30712806,30712893-30712956,30713030-30713095,
           30713283-30713435,30713522-30713626,30713739-30713974,
           30714104-30714173,30714286-30714339,30714501-30714557,
           30714662-30714741,30716056-30717919
          Length = 1226

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
 Frame = +1

Query: 52  ETENELEF--KDKHIPGN---KQQGDGDYWSWR--VENLKKEHQLINQIIETEYEKKINS 210
           ET + L+F  + K+I  N    +   GD  S R  +++LKKE   +  ++ ++  +  +S
Sbjct: 315 ETLSTLKFAQRAKYIRNNAIINEDASGDVLSMRLQIQHLKKEVSRLQGLVNSDKAECTSS 374

Query: 211 INSICEPP 234
              ICE P
Sbjct: 375 SGFICESP 382


>01_06_1178 + 35149700-35150238,35151064-35151385,35151787-35152038
          Length = 370

 Score = 27.5 bits (58), Expect = 8.4
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 156 LFFEVLHSPRPIISISLLFVPG 91
           + FE+   P P IS+ LL+ PG
Sbjct: 308 ILFELTDEPNPFISLELLYSPG 329


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,529,896
Number of Sequences: 37544
Number of extensions: 246127
Number of successful extensions: 511
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 500
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 511
length of database: 14,793,348
effective HSP length: 78
effective length of database: 11,864,916
effective search space used: 1388195172
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)