Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4e17
         (646 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein p...    24   0.93 
AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein p...    24   0.93 
AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory recept...    22   3.8  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   6.6  
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    21   6.6  
AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of act...    21   6.6  
AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity mod...    21   6.6  

>AJ005422-1|CAA06528.1|  287|Tribolium castaneum caudal protein
           protein.
          Length = 287

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 416 IQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAE 514
           IQ Q  +       Y+WI++T+ Q+    EPA+
Sbjct: 110 IQTQVARPPPARSPYEWIKKTSYQSQPNPEPAD 142


>AJ005421-1|CAA06527.1|  249|Tribolium castaneum caudal protein
           protein.
          Length = 249

 Score = 24.2 bits (50), Expect = 0.93
 Identities = 11/33 (33%), Positives = 18/33 (54%)
 Frame = +2

Query: 416 IQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAE 514
           IQ Q  +       Y+WI++T+ Q+    EPA+
Sbjct: 110 IQTQVARPPPARSPYEWIKKTSYQSQPNPEPAD 142


>AM292356-1|CAL23168.2|  251|Tribolium castaneum gustatory receptor
           candidate 35 protein.
          Length = 251

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/23 (39%), Positives = 14/23 (60%)
 Frame = -1

Query: 376 WAYDMNNLSFIMFGLVFCVHIYT 308
           W Y   +++FI+F  +   HIYT
Sbjct: 5   WYYITISMAFIIFVSLEIYHIYT 27


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = -1

Query: 457 HLYSFPQFDGLDLYVVVRLRYRF 389
           +LYS P   GLDL++ V    +F
Sbjct: 380 NLYSRPGDSGLDLFLSVDYAVKF 402



 Score = 21.4 bits (43), Expect = 6.6
 Identities = 7/17 (41%), Positives = 12/17 (70%)
 Frame = +1

Query: 184 NLVNNFAQSDFIYGSYL 234
           N+++N  +SD I G Y+
Sbjct: 220 NMISNDDESDIIQGGYI 236


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 11/36 (30%), Positives = 16/36 (44%)
 Frame = -2

Query: 519 YSSAGSDRKLFCSVVSSIH*YICTLFLNLTAWTCML 412
           YS   S+ KL    ++S+   +  L    T W C L
Sbjct: 705 YSLVFSETKLLLFKITSVMIAVSGLVYIATVWICTL 740


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 8/25 (32%), Positives = 13/25 (52%)
 Frame = -1

Query: 334 LVFCVHIYTYSC*YQFF*HQVAFNC 260
           ++F VH+    C Y F+   + F C
Sbjct: 246 ILFTVHLLLLVCIYYFYYMHLLFCC 270



 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/17 (41%), Positives = 10/17 (58%)
 Frame = -1

Query: 334 LVFCVHIYTYSC*YQFF 284
           ++F VH+    C Y FF
Sbjct: 154 IIFTVHLLFLLCIYHFF 170


>AJ888865-1|CAI61930.1|  108|Tribolium castaneum modulator of
           activity of ets genes protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = +2

Query: 371 GPIEILEPISEPDYNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAEEY 520
           GP E  + +S  D +   +  +   R  + QWI   T+Q+     P+  +
Sbjct: 16  GPTERWQRLSFDDEDNLPKDPRQWTREHVAQWINLVTQQHGLPEVPSSRF 65


>AJ622939-1|CAF22091.1|  108|Tribolium castaneum ETS activity
           modulator protein.
          Length = 108

 Score = 21.4 bits (43), Expect = 6.6
 Identities = 12/50 (24%), Positives = 22/50 (44%)
 Frame = +2

Query: 371 GPIEILEPISEPDYNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAEEY 520
           GP E  + +S  D +   +  +   R  + QWI   T+Q+     P+  +
Sbjct: 16  GPTERWQRLSFDDEDNLPKDPRQWTREHVAQWINLVTQQHGLPEVPSSRF 65


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 150,031
Number of Sequences: 336
Number of extensions: 3360
Number of successful extensions: 12
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 16552695
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)