Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4e17
(646 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC011719-1|AAH11719.1| 400|Homo sapiens transmembrane protein 4... 92 1e-18
BC003125-1|AAH03125.1| 400|Homo sapiens transmembrane protein 4... 90 5e-18
AY358625-1|AAQ88988.1| 400|Homo sapiens MGC32 protein. 90 5e-18
AK075010-1|BAC11350.1| 400|Homo sapiens protein ( Homo sapiens ... 90 5e-18
AK027877-1|BAB55425.1| 400|Homo sapiens protein ( Homo sapiens ... 90 5e-18
AK027757-1|BAB55348.1| 400|Homo sapiens protein ( Homo sapiens ... 90 5e-18
AK074073-1|BAB84899.1| 255|Homo sapiens FLJ00144 protein protein. 83 6e-16
BC008054-1|AAH08054.2| 314|Homo sapiens TMEM43 protein protein. 77 7e-14
BC056146-1|AAH56146.1| 718|Homo sapiens hook homolog 3 (Drosoph... 33 0.87
AK090540-1|BAC03473.1| 373|Homo sapiens protein ( Homo sapiens ... 33 0.87
AF241830-1|AAK29204.1| 718|Homo sapiens golgi-associated microt... 33 0.87
>BC011719-1|AAH11719.1| 400|Homo sapiens transmembrane protein 43
protein.
Length = 400
Score = 92.3 bits (219), Expect = 1e-18
Identities = 50/148 (33%), Positives = 84/148 (56%), Gaps = 1/148 (0%)
Frame = +2
Query: 203 LSLILFTGVTYFLLWAESQTIKSNLMLEELISAAISID-VHTEDQAKHYEGQIVHIIGPI 379
+ L+ F Y + E + +K+ L E +S +S D +H+ A EG++VHIIG +
Sbjct: 38 VGLMAFLLSFYLIFTNEGRALKTATSLAEGLSLVVSPDSIHSV--APENEGRLVHIIGAL 95
Query: 380 EILEPISEPDYNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYHKDWRDY 559
+ +S+P+Y + + AVKLR+ V+MYQW+ ET E + + + + Y Y+ +WR
Sbjct: 96 RTSKLLSDPNYGVHLPAVKLRRHVEMYQWV-ETEESREYTEDGQVKKETRYSYNTEWRSE 154
Query: 560 IVDSNLFYIRPGHHNPTSMPLFSETHIA 643
I++S F GH+NP++M + S T A
Sbjct: 155 IINSKNFDREIGHNNPSAMAVESFTATA 182
>BC003125-1|AAH03125.1| 400|Homo sapiens transmembrane protein 43
protein.
Length = 400
Score = 90.2 bits (214), Expect = 5e-18
Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 1/143 (0%)
Frame = +2
Query: 203 LSLILFTGVTYFLLWAESQTIKSNLMLEELISAAISID-VHTEDQAKHYEGQIVHIIGPI 379
+ L+ F Y + E + +K+ L E +S +S D +H+ A EG++VHIIG +
Sbjct: 38 VGLMAFLLSFYLIFTNEGRALKTATSLAEGLSLVVSPDSIHSV--APENEGRLVHIIGAL 95
Query: 380 EILEPISEPDYNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYHKDWRDY 559
+ +S+P+Y + + AVKLR+ V+MYQW+ ET E + + + + Y Y+ +WR
Sbjct: 96 RTSKLLSDPNYGVHLPAVKLRRHVEMYQWV-ETEESREYTEDGQVKKETRYSYNTEWRSE 154
Query: 560 IVDSNLFYIRPGHHNPTSMPLFS 628
I++S F GH NP++M + S
Sbjct: 155 IINSKNFDREIGHKNPSAMAVES 177
>AY358625-1|AAQ88988.1| 400|Homo sapiens MGC32 protein.
Length = 400
Score = 90.2 bits (214), Expect = 5e-18
Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 1/143 (0%)
Frame = +2
Query: 203 LSLILFTGVTYFLLWAESQTIKSNLMLEELISAAISID-VHTEDQAKHYEGQIVHIIGPI 379
+ L+ F Y + E + +K+ L E +S +S D +H+ A EG++VHIIG +
Sbjct: 38 VGLMAFLLSFYLIFTNEGRALKTATSLAEGLSLVVSPDSIHSV--APENEGRLVHIIGAL 95
Query: 380 EILEPISEPDYNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYHKDWRDY 559
+ +S+P+Y + + AVKLR+ V+MYQW+ ET E + + + + Y Y+ +WR
Sbjct: 96 RTSKLLSDPNYGVHLPAVKLRRHVEMYQWV-ETEESREYTEDGQVKKETRYSYNTEWRSE 154
Query: 560 IVDSNLFYIRPGHHNPTSMPLFS 628
I++S F GH NP++M + S
Sbjct: 155 IINSKNFDREIGHKNPSAMAVES 177
>AK075010-1|BAC11350.1| 400|Homo sapiens protein ( Homo sapiens
cDNA FLJ90529 fis, clone NT2RP4001879. ).
Length = 400
Score = 90.2 bits (214), Expect = 5e-18
Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 1/143 (0%)
Frame = +2
Query: 203 LSLILFTGVTYFLLWAESQTIKSNLMLEELISAAISID-VHTEDQAKHYEGQIVHIIGPI 379
+ L+ F Y + E + +K+ L E +S +S D +H+ A EG++VHIIG +
Sbjct: 38 VGLMAFLLSFYLIFTNEGRALKTATSLAEGLSLVVSPDSIHSV--APENEGRLVHIIGAL 95
Query: 380 EILEPISEPDYNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYHKDWRDY 559
+ +S+P+Y + + AVKLR+ V+MYQW+ ET E + + + + Y Y+ +WR
Sbjct: 96 RTSKLLSDPNYGVHLPAVKLRRHVEMYQWV-ETEESREYTEDGQVKKETRYSYNTEWRSE 154
Query: 560 IVDSNLFYIRPGHHNPTSMPLFS 628
I++S F GH NP++M + S
Sbjct: 155 IINSKNFDREIGHKNPSAMAVES 177
>AK027877-1|BAB55425.1| 400|Homo sapiens protein ( Homo sapiens
cDNA FLJ14971 fis, clone THYRO1000570. ).
Length = 400
Score = 90.2 bits (214), Expect = 5e-18
Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 1/143 (0%)
Frame = +2
Query: 203 LSLILFTGVTYFLLWAESQTIKSNLMLEELISAAISID-VHTEDQAKHYEGQIVHIIGPI 379
+ L+ F Y + E + +K+ L E +S +S D +H+ A EG++VHIIG +
Sbjct: 38 VGLMAFLLSFYLIFTNEGRALKTATSLAEGLSLVVSPDSIHSV--APENEGRLVHIIGAL 95
Query: 380 EILEPISEPDYNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYHKDWRDY 559
+ +S+P+Y + + AVKLR+ V+MYQW+ ET E + + + + Y Y+ +WR
Sbjct: 96 RTSKLLSDPNYGVHLPAVKLRRHVEMYQWV-ETEESREYTEDGQVKKETRYSYNTEWRSE 154
Query: 560 IVDSNLFYIRPGHHNPTSMPLFS 628
I++S F GH NP++M + S
Sbjct: 155 IINSKNFDREIGHKNPSAMAVES 177
>AK027757-1|BAB55348.1| 400|Homo sapiens protein ( Homo sapiens
cDNA FLJ14851 fis, clone PLACE1000712. ).
Length = 400
Score = 90.2 bits (214), Expect = 5e-18
Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 1/143 (0%)
Frame = +2
Query: 203 LSLILFTGVTYFLLWAESQTIKSNLMLEELISAAISID-VHTEDQAKHYEGQIVHIIGPI 379
+ L+ F Y + E + +K+ L E +S +S D +H+ A EG++VHIIG +
Sbjct: 38 VGLMAFLLSFYLIFTNEGRALKTATSLAEGLSLVVSPDSIHSV--APENEGRLVHIIGAL 95
Query: 380 EILEPISEPDYNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYHKDWRDY 559
+ +S+P+Y + + AVKLR+ V+MYQW+ ET E + + + + Y Y+ +WR
Sbjct: 96 RTSKLLSDPNYGVHLPAVKLRRHVEMYQWV-ETEESREYTEDGQVKKETRYSYNTEWRSE 154
Query: 560 IVDSNLFYIRPGHHNPTSMPLFS 628
I++S F GH NP++M + S
Sbjct: 155 IINSKNFDREIGHKNPSAMAVES 177
>AK074073-1|BAB84899.1| 255|Homo sapiens FLJ00144 protein protein.
Length = 255
Score = 83.4 bits (197), Expect = 6e-16
Identities = 39/103 (37%), Positives = 63/103 (61%)
Frame = +2
Query: 335 AKHYEGQIVHIIGPIEILEPISEPDYNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAE 514
A EG++VHIIG + + +S+P+Y + + AVKLR+ V+MYQW+ ET E + +
Sbjct: 11 APENEGRLVHIIGALRTSKLLSDPNYGVHLPAVKLRRHVEMYQWV-ETEESREYTEDGQV 69
Query: 515 EYQKTYWYHKDWRDYIVDSNLFYIRPGHHNPTSMPLFSETHIA 643
+ + Y Y+ +WR I++S F GH+NP++M + S T A
Sbjct: 70 KKETRYSYNTEWRSEIINSKNFDREIGHNNPSAMAVESFTATA 112
>BC008054-1|AAH08054.2| 314|Homo sapiens TMEM43 protein protein.
Length = 314
Score = 76.6 bits (180), Expect = 7e-14
Identities = 34/92 (36%), Positives = 57/92 (61%)
Frame = +2
Query: 353 QIVHIIGPIEILEPISEPDYNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAEEYQKTY 532
++VHIIG + + +S+P+Y + + AVKLR+ V+MYQW+ ET E + + + + Y
Sbjct: 1 RLVHIIGALRTSKLLSDPNYGVHLPAVKLRRHVEMYQWV-ETEESREYTEDGQVKKETRY 59
Query: 533 WYHKDWRDYIVDSNLFYIRPGHHNPTSMPLFS 628
Y+ +WR I++S F GH NP++M + S
Sbjct: 60 SYNTEWRSEIINSKNFDREIGHKNPSAMAVES 91
>BC056146-1|AAH56146.1| 718|Homo sapiens hook homolog 3
(Drosophila) protein.
Length = 718
Score = 33.1 bits (72), Expect = 0.87
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +2
Query: 269 SNLMLEELISAAISIDVHTEDQAKHYEGQIVHIIGPIEILEPISEPDYNIQVQAVK--LR 442
S+L +EEL A + + + Y+ + I L+P ++QA+K L+
Sbjct: 579 SSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQ 638
Query: 443 KRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYH 541
+R +++ +E+ E+ E E+Y + WY+
Sbjct: 639 ERDRLFHSLEKEYEKTKSQREMEEKYIVSAWYN 671
>AK090540-1|BAC03473.1| 373|Homo sapiens protein ( Homo sapiens
cDNA FLJ33221 fis, clone ASTRO2000653, moderately
similar to Homo sapiens hook1 protein (HOOK1) mRNA. ).
Length = 373
Score = 33.1 bits (72), Expect = 0.87
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +2
Query: 269 SNLMLEELISAAISIDVHTEDQAKHYEGQIVHIIGPIEILEPISEPDYNIQVQAVK--LR 442
S+L +EEL A + + + Y+ + I L+P ++QA+K L+
Sbjct: 234 SSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQ 293
Query: 443 KRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYH 541
+R +++ +E+ E+ E E+Y + WY+
Sbjct: 294 ERDRLFHSLEKEYEKTKSQREMEEKYIVSAWYN 326
>AF241830-1|AAK29204.1| 718|Homo sapiens golgi-associated
microtubule-binding protein HOOK3 protein.
Length = 718
Score = 33.1 bits (72), Expect = 0.87
Identities = 22/93 (23%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = +2
Query: 269 SNLMLEELISAAISIDVHTEDQAKHYEGQIVHIIGPIEILEPISEPDYNIQVQAVK--LR 442
S+L +EEL A + + + Y+ + I L+P ++QA+K L+
Sbjct: 579 SSLKIEELQEALRKKEEEMKQMEERYKKYLEKAKSVIRTLDPKQNQGAAPEIQALKNQLQ 638
Query: 443 KRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYH 541
+R +++ +E+ E+ E E+Y + WY+
Sbjct: 639 ERDRLFHSLEKEYEKTKSQREMEEKYIVSAWYN 671
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 87,937,248
Number of Sequences: 237096
Number of extensions: 1822735
Number of successful extensions: 4625
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 4508
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4613
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7141427170
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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