Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4e17
         (646 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF000265-9|AAB52943.2|  449|Caenorhabditis elegans Hypothetical ...    32   0.40 
AL032655-5|CAA21723.1|  360|Caenorhabditis elegans Hypothetical ...    30   1.2  
AF100306-9|ABB88216.1|  105|Caenorhabditis elegans Hypothetical ...    29   2.8  
Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical pr...    29   3.7  
AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical ...    29   3.7  
AF106577-10|AAC78189.1|  796|Caenorhabditis elegans Hypothetical...    29   3.7  
U39678-8|AAK39208.2|  228|Caenorhabditis elegans Hypothetical pr...    28   4.9  
AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cycl...    28   6.5  
AF000194-6|ABC71793.1|  385|Caenorhabditis elegans Hypothetical ...    28   6.5  
AF000194-5|AAK39377.2|  616|Caenorhabditis elegans Hypothetical ...    28   6.5  

>AF000265-9|AAB52943.2|  449|Caenorhabditis elegans Hypothetical
           protein C18E3.2 protein.
          Length = 449

 Score = 31.9 bits (69), Expect = 0.40
 Identities = 17/59 (28%), Positives = 27/59 (45%)
 Frame = +2

Query: 284 EELISAAISIDVHTEDQAKHYEGQIVHIIGPIEILEPISEPDYNIQVQAVKLRKRVQMY 460
           +E +S    IDV  ED  K +    VH  G    ++ + +  Y+I  Q  +L+ R   Y
Sbjct: 317 QEQVSTCYDIDVEMEDPVKQFMHTFVHSPGLANDIQTLDQKCYDIIEQINELKTRRDFY 375


>AL032655-5|CAA21723.1|  360|Caenorhabditis elegans Hypothetical
           protein Y6B3B.10 protein.
          Length = 360

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 11/38 (28%), Positives = 24/38 (63%), Gaps = 1/38 (2%)
 Frame = -1

Query: 409 VRLRYRFQYFNWAYDMNNLSFIMFGLVFCV-HIYTYSC 299
           ++ R   QY+ + + M N +FI+F +++ +  +Y Y+C
Sbjct: 233 LKKRTNRQYYKYYFLMGNAAFILFAIIWVIFRLYWYTC 270


>AF100306-9|ABB88216.1|  105|Caenorhabditis elegans Hypothetical
           protein T24C4.9 protein.
          Length = 105

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 12/33 (36%), Positives = 23/33 (69%), Gaps = 1/33 (3%)
 Frame = +3

Query: 21  NQSECCCLIFLLVSSFIC*IYQIVL-SMLILSS 116
           N  + CC++F +V  F+C +  +VL S+++LS+
Sbjct: 3   NLLDWCCMLFHIVHIFVCSVSSMVLRSVIVLSA 35


>Z50875-1|CAA90776.1| 1872|Caenorhabditis elegans Hypothetical
           protein T08A11.1 protein.
          Length = 1872

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/63 (25%), Positives = 26/63 (41%)
 Frame = +2

Query: 410 YNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYHKDWRDYIVDSNLFYIR 589
           Y+ Q+Q  KL++ +   Q+   T    NFL            YH D R       + ++ 
Sbjct: 552 YSSQIQE-KLKEMLPQVQFEVSTAADGNFLQVVNMSMNSFSMYHSDRRFETTGQQIIFVT 610

Query: 590 PGH 598
           PG+
Sbjct: 611 PGN 613


>AL021180-3|CAA15982.1| 1872|Caenorhabditis elegans Hypothetical
           protein T08A11.1 protein.
          Length = 1872

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 16/63 (25%), Positives = 26/63 (41%)
 Frame = +2

Query: 410 YNIQVQAVKLRKRVQMYQWIEETTEQNNFLSEPAEEYQKTYWYHKDWRDYIVDSNLFYIR 589
           Y+ Q+Q  KL++ +   Q+   T    NFL            YH D R       + ++ 
Sbjct: 552 YSSQIQE-KLKEMLPQVQFEVSTAADGNFLQVVNMSMNSFSMYHSDRRFETTGQQIIFVT 610

Query: 590 PGH 598
           PG+
Sbjct: 611 PGN 613


>AF106577-10|AAC78189.1|  796|Caenorhabditis elegans Hypothetical
           protein F46F5.11 protein.
          Length = 796

 Score = 28.7 bits (61), Expect = 3.7
 Identities = 19/64 (29%), Positives = 28/64 (43%), Gaps = 5/64 (7%)
 Frame = +2

Query: 398 SEPDYNIQVQAVKLRKRVQMYQWIEETTEQN--NFLSEP---AEEYQKTYWYHKDWRDYI 562
           +E D N+Q  A K+     + QW  ET   N     S P   A E+  +Y + KD    +
Sbjct: 436 TEKDENVQRAAQKINYFGDIAQWCNETGYSNLTGIFSSPEQLAREHDNSYVFKKDLNSVL 495

Query: 563 VDSN 574
           +  N
Sbjct: 496 IVVN 499


>U39678-8|AAK39208.2|  228|Caenorhabditis elegans Hypothetical
           protein C39D10.6 protein.
          Length = 228

 Score = 28.3 bits (60), Expect = 4.9
 Identities = 17/56 (30%), Positives = 30/56 (53%)
 Frame = +2

Query: 152 AWTAVKNQFKETWLTTSLSLILFTGVTYFLLWAESQTIKSNLMLEELISAAISIDV 319
           ++T     F  T ++T+ S+++F G   F +W E +      +  ++IS AISI V
Sbjct: 65  SFTRSSTVFVYTCMSTAFSIVIF-GSLLFGVWKEKRLYLYPYLFFQVISIAISIIV 119


>AF022968-5|AAB69885.2| 1080|Caenorhabditis elegans Adenylyl cyclase
            protein 2 protein.
          Length = 1080

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 20/81 (24%), Positives = 39/81 (48%), Gaps = 4/81 (4%)
 Frame = +2

Query: 269  SNLMLEELISAAISIDVHTEDQAKHYEGQIVHIIGPIEI-LEPISEPDYNIQVQAVKLRK 445
            +NLM+E  ++ +  +D    D  +++E +I   +GP+   +    +P Y+I    V L  
Sbjct: 946  ANLMIEFALAMSQILDALNRDSFQNFELRIGMSVGPLVAGVIGAQKPQYDIWGNTVNLAS 1005

Query: 446  RVQMY---QWIEETTEQNNFL 499
            R+  +   + I  TT+    L
Sbjct: 1006 RMDTHGEPRKIHATTDMGRVL 1026


>AF000194-6|ABC71793.1|  385|Caenorhabditis elegans Hypothetical
           protein ZC328.3b protein.
          Length = 385

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 251 ESQTIKSNLMLEELISAAISIDVHTEDQAKHYEGQ 355
           E+ T+K+N   +    ++ S D H ED A H+  Q
Sbjct: 18  EASTLKNNNDKDNTSQSSTSSDFHDEDSATHFSEQ 52


>AF000194-5|AAK39377.2|  616|Caenorhabditis elegans Hypothetical
           protein ZC328.3a protein.
          Length = 616

 Score = 27.9 bits (59), Expect = 6.5
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +2

Query: 251 ESQTIKSNLMLEELISAAISIDVHTEDQAKHYEGQ 355
           E+ T+K+N   +    ++ S D H ED A H+  Q
Sbjct: 249 EASTLKNNNDKDNTSQSSTSSDFHDEDSATHFSEQ 283


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,217,284
Number of Sequences: 27780
Number of extensions: 291069
Number of successful extensions: 757
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 757
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1423653030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)