Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4e15
(737 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC1805.17 |crm1|caf2, SPAC1B2.01|nuclear export receptor Crm1|... 247 1e-66
SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces... 30 0.40
SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces p... 28 1.2
SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr... 28 1.6
SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr 2|||... 27 2.1
SPAC3A12.08 |||conserved fungal protein|Schizosaccharomyces pomb... 27 2.8
SPCC622.11 |||LMBR1-like membrane protein|Schizosaccharomyces po... 27 3.7
SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein Klp6|S... 27 3.7
SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyce... 27 3.7
SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|ch... 27 3.7
SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|c... 27 3.7
SPAC5H10.12c |||acetylglucosaminyltransferase|Schizosaccharomyce... 26 4.9
SPBC21B10.06c |||sequence orphan|Schizosaccharomyces pombe|chr 2... 26 4.9
SPAC4G8.12c |||alpha-1,2-mannosyltransferase |Schizosaccharomyce... 26 6.4
SPAPYUG7.05 |||delta-1-pyrroline-5-carboxylate reductase |Schizo... 26 6.4
SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces ... 26 6.4
SPBC337.04 |ppk27||serine/threonine protein kinase Ppk27 |Schizo... 26 6.4
SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyce... 25 8.5
SPCC1795.09 |yps1||aspartic protease Yps1|Schizosaccharomyces po... 25 8.5
>SPAC1805.17 |crm1|caf2, SPAC1B2.01|nuclear export receptor
Crm1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1078
Score = 247 bits (605), Expect = 1e-66
Identities = 114/238 (47%), Positives = 168/238 (70%)
Frame = +1
Query: 1 IISQASRNVEILKDPEAVKQLVSILKTNVRACRALAHPYVVQLGRIYLDMLNVYKVMSEN 180
I++QA++N ++L DP+ VK L ++LKTNV AC ++ + Q+ + Y+DML +YK +S
Sbjct: 669 IVAQAAQNAQVLGDPQTVKILANVLKTNVAACTSIGSGFYPQIAKNYVDMLGLYKAVSGL 728
Query: 181 ISQAIALNGVAVTKQPLIKNMRIIKKETLNLISSWVTRSIDNSMVLENFIPPLLDAVLLD 360
IS+ +A G TK P ++ +R IKKE L L+ ++++R+ D +V IP L +AVLLD
Sbjct: 729 ISEVVAAQGNIATKTPHVRGLRTIKKEILKLVDAYISRAEDLELVGNTLIPALFEAVLLD 788
Query: 361 YQRTAVPEAREPEVLSCMAAIVHRLEGHITSEVPKIFDAVFECTLEMINKDFEEYPEHRT 540
Y + VP+AR+ EVL+ + IV++L +T ++P + DAVF CTLEMI+KDF EYPEHR
Sbjct: 789 YLQN-VPDARDAEVLNLITTIVNQLSELLTDKIPLVLDAVFGCTLEMISKDFSEYPEHRA 847
Query: 541 EFFLLLQAVNTNCFKAFLSIPPAQFKLVLDSIIWAFKHTMRNVADTGLQILYRLLLNV 714
FF LL+A+N NCF A L+IP QFKLV++SI+W+FKH R++ +TGL IL L+ N+
Sbjct: 848 AFFQLLRAINLNCFPALLNIPAPQFKLVINSIVWSFKHVSRDIQETGLNILLELINNM 905
>SPAC32A11.01 |mug8||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 720
Score = 29.9 bits (64), Expect = 0.40
Identities = 28/108 (25%), Positives = 49/108 (45%), Gaps = 12/108 (11%)
Frame = +1
Query: 391 EPEVLSCMAAIVHRLEGH-ITSEVPKIFDAVFECTLEMINKDFEEYPEHRTE-------- 543
E ++SC+ ++HR+ G IT K+FD E + F+ + +H T+
Sbjct: 98 EASLISCLRWLLHRIPGGVITWSTYKLFDEA-ETRANYPVRGFDIFMKHATKHSCHFNIL 156
Query: 544 --FFLLLQAVNTNCFKAFLSIPPAQFKLVLD-SIIWAFKHTMRNVADT 678
F LL +++ + S + +LV + IWAF M N+ +T
Sbjct: 157 KCFLKLLMSLSAKLAVSSNSSTVSSLELVSQIASIWAFDWPMMNLQET 204
>SPBC23E6.02 |||ATP-dependent DNA helicase |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 1040
Score = 28.3 bits (60), Expect = 1.2
Identities = 16/46 (34%), Positives = 27/46 (58%)
Frame = -1
Query: 590 NALKQFVLTACSNKKNSVLCSGYSSKSLLIISRVHSKTASNIFGTS 453
N +++ VL A ++K ++ S K L ISR+++K S +FG S
Sbjct: 994 NTIEERVL-ALQDRKRELIDSALGEKGLREISRLNTKELSFLFGMS 1038
>SPCC645.06c |rgf3|lad1|RhoGEF Rgf3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1275
Score = 27.9 bits (59), Expect = 1.6
Identities = 19/58 (32%), Positives = 27/58 (46%), Gaps = 1/58 (1%)
Frame = -1
Query: 707 NNSRYNICK-PVSATFLIVCLNAQIMESKTNLNCAGGMLKNALKQFVLTACSNKKNSV 537
N SRY + K P+ L++ + K+N N G L L Q LT S +K+ V
Sbjct: 733 NASRYVVSKRPIPLDLLVLSPKMDDFQLKSNTNKFLGSLAGNLPQESLTTKSKRKSKV 790
>SPBC215.13 |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 534
Score = 27.5 bits (58), Expect = 2.1
Identities = 21/60 (35%), Positives = 29/60 (48%)
Frame = -1
Query: 521 SSKSLLIISRVHSKTASNIFGTSEVICPSSLCTIAAMQDSTSGSRASGTAVLW*SKSTAS 342
+S S L S V S ++S +S + SSL T + S+S S S + S STAS
Sbjct: 205 TSSSYLSSSSVVSSSSSPSSSSSSTLTSSSLSTSSIPSTSSSSSSTSSSLSSSSSSSTAS 264
>SPAC3A12.08 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 214
Score = 27.1 bits (57), Expect = 2.8
Identities = 12/33 (36%), Positives = 20/33 (60%)
Frame = +1
Query: 28 EILKDPEAVKQLVSILKTNVRACRALAHPYVVQ 126
EI K PEAV+ + +I + R+ + HP ++Q
Sbjct: 48 EISKSPEAVQMIDNIYRERQRSMKMEEHPSLLQ 80
>SPCC622.11 |||LMBR1-like membrane protein|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 562
Score = 26.6 bits (56), Expect = 3.7
Identities = 15/48 (31%), Positives = 22/48 (45%)
Frame = +2
Query: 272 LFQVGLHARLITVWFWKTLFHLFSMLCFWITKGLLFLKLVSLKYCLAW 415
+F+V LH I V+ F + +C GLL L L+ + L W
Sbjct: 28 IFEVFLHFLKIPVYMTHLGFPITPTVCLIEMLGLLLLLLIPALFTLIW 75
>SPBC1685.15c |klp6|sot2, SPBC649.01c|kinesin-like protein
Klp6|Schizosaccharomyces pombe|chr 2|||Manual
Length = 784
Score = 26.6 bits (56), Expect = 3.7
Identities = 12/16 (75%), Positives = 12/16 (75%)
Frame = +3
Query: 159 LQSNV*KYKSSHSFKW 206
L SNV K KSSHS KW
Sbjct: 730 LHSNVAKNKSSHSSKW 745
>SPAC1093.01 ||SPAC12B10.18|PPR repeat protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1261
Score = 26.6 bits (56), Expect = 3.7
Identities = 29/124 (23%), Positives = 54/124 (43%), Gaps = 3/124 (2%)
Frame = -3
Query: 417 CHARQYFRLTSFRNSSP---LVIQKHSIEKRWNKVFQNHTVINRACNPT*NKVQSFLFYY 247
C R+ +L ++ S+ + I+K S K + ++ AC +K + F
Sbjct: 449 CFLRRLAQLGHYKESAEWLGMAIEKISTYKASPSTLSS--ILEAACLNNNDKF-AIAFVR 505
Query: 246 SHILNERLFSNCYAI*SYGLTYIFRHYFVNIKHVKVYPS*LHNIWVC*CTTCTHICFQYT 67
+ L+ FS+C+A+ L + R V++ H+ YP +C ++ T+ F
Sbjct: 506 KYTLSR--FSDCHAVLLRYLDLLARSGNVDLLHLHAYPV------ICSVSSHTNFTFSNV 557
Query: 66 YKLF 55
YK F
Sbjct: 558 YKAF 561
>SPCP25A2.03 |||THO complex subunit |Schizosaccharomyces pombe|chr
3|||Manual
Length = 752
Score = 26.6 bits (56), Expect = 3.7
Identities = 17/65 (26%), Positives = 27/65 (41%), Gaps = 1/65 (1%)
Frame = -3
Query: 588 CFETVCIDRLQ**EKFCSMFWIL-FKVFVNHFQSTFKDCIKYFWYFRSYMSFKSVHDCCH 412
C+ET + E+ +F IL V N +F D + F M +V++C
Sbjct: 61 CYETARKSEIGLEERLKCLFAILDLLVIGNEINESFCDHLLPFLILEELMDIHTVNECAK 120
Query: 411 ARQYF 397
+YF
Sbjct: 121 LYEYF 125
>SPAPB21F2.02 |||Dopey family protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1687
Score = 26.6 bits (56), Expect = 3.7
Identities = 21/64 (32%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
Frame = +1
Query: 397 EVLSCMAAIVHRLEGHITSEVPKIFDAVFECTLEMI--NKDFEEYPEHRTEFFL-LLQAV 567
++L CM+ V R+EG TS KIF + + E+I + F+ Y L + + V
Sbjct: 1184 DILCCMSDFVSRVEGENTS---KIFTEISKFVREIISSSNSFKNYLLVCLRMLLEVAKNV 1240
Query: 568 NTNC 579
NT C
Sbjct: 1241 NTYC 1244
>SPAC5H10.12c |||acetylglucosaminyltransferase|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 371
Score = 26.2 bits (55), Expect = 4.9
Identities = 17/40 (42%), Positives = 23/40 (57%), Gaps = 1/40 (2%)
Frame = +1
Query: 490 TLEMINKDFEEYPEHRTEFF-LLLQAVNTNCFKAFLSIPP 606
T+ N+DF+EY R+EF+ LL AV+ SIPP
Sbjct: 219 TVYHFNEDFKEYGASRSEFYPYLLAAVSDR--GEHHSIPP 256
>SPBC21B10.06c |||sequence orphan|Schizosaccharomyces pombe|chr
2|||Manual
Length = 470
Score = 26.2 bits (55), Expect = 4.9
Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Frame = -3
Query: 450 SYMSFKSVHDCCHARQYF-RLTSFRNSSPLVIQKHSIEKRWNKVF 319
SY+ F S+ CH YF R+ + + V H E N+V+
Sbjct: 147 SYICFSSLIRICHCWTYFIRIMGLSSLNKFVNLLHDFETTSNRVY 191
>SPAC4G8.12c |||alpha-1,2-mannosyltransferase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 533
Score = 25.8 bits (54), Expect = 6.4
Identities = 12/29 (41%), Positives = 16/29 (55%)
Frame = +3
Query: 633 HNLGI*TYNEECGRYRFTNIVPTVVKC*G 719
H +GI T E C TN +PTV++ G
Sbjct: 505 HGIGIFTAKEICENNTITNELPTVLRSVG 533
>SPAPYUG7.05 |||delta-1-pyrroline-5-carboxylate reductase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 282
Score = 25.8 bits (54), Expect = 6.4
Identities = 20/59 (33%), Positives = 29/59 (49%), Gaps = 1/59 (1%)
Frame = -1
Query: 596 LKNALK-QFVLTACSNKKNSVLCSGYSSKSLLIISRVHSKTASNIFGTSEVICPSSLCT 423
+K ALK + +L+ + K S L S + +I R+ TAS I + VICP T
Sbjct: 99 MKEALKGKLILSILAGKTISSLQSMLDESTRVI--RIMPNTASRIRESMSVICPGPNAT 155
>SPAC959.05c |||protein disulfide isomerase |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 632
Score = 25.8 bits (54), Expect = 6.4
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = -3
Query: 102 CTTCTHICFQYTYKLFNSFRVFQDFNITRSLRYN 1
C +C + K F +FRVFQ F+ S++YN
Sbjct: 237 CDEEKEMCNHFHIKKFPTFRVFQGFD---SIQYN 267
>SPBC337.04 |ppk27||serine/threonine protein kinase Ppk27
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 413
Score = 25.8 bits (54), Expect = 6.4
Identities = 12/36 (33%), Positives = 18/36 (50%)
Frame = +1
Query: 37 KDPEAVKQLVSILKTNVRACRALAHPYVVQLGRIYL 144
K K V + + + A + L+HP VVQL Y+
Sbjct: 140 KSQNEKKARVKVFRQEIWALKTLSHPCVVQLLNYYV 175
>SPAC26A3.05 |chc1||clathrin heavy chain Chc1 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1666
Score = 25.4 bits (53), Expect = 8.5
Identities = 15/49 (30%), Positives = 29/49 (59%)
Frame = +1
Query: 334 PLLDAVLLDYQRTAVPEAREPEVLSCMAAIVHRLEGHITSEVPKIFDAV 480
PLLD V+ TAVPE+ +PE +S + + +E + S++ ++ + +
Sbjct: 965 PLLDQVIA----TAVPESSDPEAVSIVVKAL--MEVDLPSQLIELLEKI 1007
>SPCC1795.09 |yps1||aspartic protease Yps1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 521
Score = 25.4 bits (53), Expect = 8.5
Identities = 17/62 (27%), Positives = 29/62 (46%)
Frame = +1
Query: 151 LNVYKVMSENISQAIALNGVAVTKQPLIKNMRIIKKETLNLISSWVTRSIDNSMVLENFI 330
+NV +S + QA+ +T + + + + K L L +S SID S + +F
Sbjct: 163 INVQDSLSYSHYQALPDFQFGITLKEYVPSSMLPYKGVLGLAASTEINSIDYSDSISSFS 222
Query: 331 PP 336
PP
Sbjct: 223 PP 224
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 3,190,490
Number of Sequences: 5004
Number of extensions: 69840
Number of successful extensions: 238
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 228
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 237
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 349251756
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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