Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4e15
         (737 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    23   3.0  
AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precur...    23   3.0  
AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9 methylt...    23   4.0  
U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    22   5.2  
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    22   5.2  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    22   5.2  
AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc fi...    22   5.2  
DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex det...    21   9.1  
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       21   9.1  

>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 17/78 (21%), Positives = 31/78 (39%)
 Frame = +1

Query: 19  RNVEILKDPEAVKQLVSILKTNVRACRALAHPYVVQLGRIYLDMLNVYKVMSENISQAIA 198
           RN+E++   +   Q ++ LK   R    L H + ++   +      + KV+       + 
Sbjct: 337 RNIEVVAKNKETLQAITGLKVKRRISFILVHGFPLEYEYVLAVSNRIQKVIYGFDFNDVN 396

Query: 199 LNGVAVTKQPLIKNMRII 252
              +      LIKN R I
Sbjct: 397 FRILIANVNDLIKNTRCI 414


>AY127579-1|AAN02286.1|  405|Apis mellifera venom protease precursor
           protein.
          Length = 405

 Score = 23.0 bits (47), Expect = 3.0
 Identities = 8/17 (47%), Positives = 12/17 (70%)
 Frame = +3

Query: 627 RFHNLGI*TYNEECGRY 677
           R  N+GI ++  ECG+Y
Sbjct: 362 RLVNIGIISWGAECGKY 378


>AM050259-1|CAJ18340.1|  683|Apis mellifera putative H3K9
           methyltransferase protein.
          Length = 683

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 7/18 (38%), Positives = 9/18 (50%)
 Frame = +3

Query: 84  CACMSCTSTPICCAIRKD 137
           C C +C S   CC  + D
Sbjct: 435 CECKTCNSKTKCCFAQDD 452


>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 311 WFWKTLFHLFSMLCFW 358
           WFW T F +  +L  W
Sbjct: 179 WFWVTPFTVLPLLKVW 194


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/34 (23%), Positives = 17/34 (50%)
 Frame = -2

Query: 490 YIQRLHQIFLVLQKLYVLQVCARLLPCKTVLQAH 389
           ++ +LHQ+    +K+Y   +C      K  ++ H
Sbjct: 245 HVLKLHQVAHYGEKVYKCTLCHETFGSKKTMELH 278


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 7/16 (43%), Positives = 9/16 (56%)
 Frame = +2

Query: 311 WFWKTLFHLFSMLCFW 358
           WFW T F +  +L  W
Sbjct: 179 WFWVTPFTVLPLLKVW 194


>AB208107-1|BAE72139.1|   71|Apis mellifera Broad complex zinc
           finger domain-Z2 isoform protein.
          Length = 71

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -2

Query: 454 QKLYVLQVCARLLPCKTVLQAH 389
           +KL+  Q+C ++L  K  L+ H
Sbjct: 3   KKLFTCQLCGKVLCSKASLKRH 24


>DQ325090-1|ABD14104.1|  178|Apis mellifera complementary sex
           determiner protein.
          Length = 178

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 9/36 (25%), Positives = 18/36 (50%)
 Frame = -3

Query: 246 SHILNERLFSNCYAI*SYGLTYIFRHYFVNIKHVKV 139
           S + N   +SN     +Y     +++Y +NI+ + V
Sbjct: 83  SSLSNNYKYSNYNNYNNYNKKLYYKNYIINIEQIPV 118


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 21.4 bits (43), Expect = 9.1
 Identities = 7/15 (46%), Positives = 8/15 (53%)
 Frame = -3

Query: 678 GICHIPHCMFKCPDY 634
           G+C  P C   C DY
Sbjct: 281 GVCKWPGCEVICEDY 295


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 213,635
Number of Sequences: 438
Number of extensions: 4759
Number of successful extensions: 16
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 16
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 23023035
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)