Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4e10
         (764 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P55809 Cluster: Succinyl-CoA:3-ketoacid-coenzyme A tran...    52   2e-05
UniRef50_Q8IGC8 Cluster: RH54340p; n=1; Drosophila melanogaster|...    51   4e-05
UniRef50_UPI0000D9989C Cluster: PREDICTED: similar to 3-oxoacid ...    46   0.001
UniRef50_A6R6Q3 Cluster: Succinyl-CoA:3-ketoacid-coenzyme A tran...    44   0.005
UniRef50_Q2GQL3 Cluster: Putative uncharacterized protein; n=1; ...    43   0.007
UniRef50_Q8RGL8 Cluster: Butyrate-acetoacetate CoA-transferase s...    41   0.039
UniRef50_Q55DK3 Cluster: Putative uncharacterized protein; n=1; ...    37   0.63 
UniRef50_Q4Q7A2 Cluster: Succinyl-coa:3-ketoacid-coenzyme a tran...    36   1.5  
UniRef50_Q8I2U7 Cluster: Putative uncharacterized protein PFI101...    35   1.9  
UniRef50_Q01Q71 Cluster: Undecaprenyl-phosphate galactose phosph...    35   2.5  
UniRef50_UPI00015BD2B6 Cluster: UPI00015BD2B6 related cluster; n...    33   5.9  
UniRef50_Q4J7K9 Cluster: Membrane protein; n=2; cellular organis...    33   5.9  
UniRef50_Q4J5A0 Cluster: Putative uncharacterized protein; n=1; ...    33   7.8  
UniRef50_Q11E33 Cluster: Coenzyme A transferase; n=2; Proteobact...    33   7.8  

>UniRef50_P55809 Cluster: Succinyl-CoA:3-ketoacid-coenzyme A
           transferase 1, mitochondrial precursor; n=294; cellular
           organisms|Rep: Succinyl-CoA:3-ketoacid-coenzyme A
           transferase 1, mitochondrial precursor - Homo sapiens
           (Human)
          Length = 520

 Score = 52.0 bits (119), Expect = 2e-05
 Identities = 23/44 (52%), Positives = 32/44 (72%)
 Frame = +1

Query: 4   VFEVDKEKGLILTELAEGVKVEDIVASTGCEFNVAQKIKTMGDV 135
           VF+VDK+KGL L EL EG+ V+D+  STGC+F V+ K+  M  +
Sbjct: 475 VFDVDKKKGLTLIELWEGLTVDDVQKSTGCDFAVSPKLMPMQQI 518


>UniRef50_Q8IGC8 Cluster: RH54340p; n=1; Drosophila
           melanogaster|Rep: RH54340p - Drosophila melanogaster
           (Fruit fly)
          Length = 143

 Score = 50.8 bits (116), Expect = 4e-05
 Identities = 23/44 (52%), Positives = 31/44 (70%)
 Frame = +1

Query: 4   VFEVDKEKGLILTELAEGVKVEDIVASTGCEFNVAQKIKTMGDV 135
           VF V+K  GL L E+AEG  V+DI+ASTG +F V+  +K MG +
Sbjct: 98  VFTVEKGVGLTLIEVAEGYTVDDIIASTGAKFTVSPNLKKMGQI 141


>UniRef50_UPI0000D9989C Cluster: PREDICTED: similar to 3-oxoacid CoA
           transferase 2; n=1; Macaca mulatta|Rep: PREDICTED:
           similar to 3-oxoacid CoA transferase 2 - Macaca mulatta
          Length = 691

 Score = 46.0 bits (104), Expect = 0.001
 Identities = 20/41 (48%), Positives = 29/41 (70%)
 Frame = +1

Query: 4   VFEVDKEKGLILTELAEGVKVEDIVASTGCEFNVAQKIKTM 126
           VF+V +++GL LTEL EG+ V+D+  STGC F V   ++ M
Sbjct: 382 VFDVHRKRGLTLTELWEGLTVDDVRKSTGCAFAVCPNLRPM 422


>UniRef50_A6R6Q3 Cluster: Succinyl-CoA:3-ketoacid-coenzyme A
           transferase 1, mitochondrial; n=1; Ajellomyces
           capsulatus NAm1|Rep: Succinyl-CoA:3-ketoacid-coenzyme A
           transferase 1, mitochondrial - Ajellomyces capsulatus
           NAm1
          Length = 491

 Score = 43.6 bits (98), Expect = 0.005
 Identities = 20/42 (47%), Positives = 27/42 (64%)
 Frame = +1

Query: 1   CVFEVDKEKGLILTELAEGVKVEDIVASTGCEFNVAQKIKTM 126
           CVF+VD   GL L ELA+GV V+++ A T   F VA  ++ M
Sbjct: 449 CVFDVDFTDGLTLVELADGVTVDEVKAKTEAPFKVADVVQPM 490


>UniRef50_Q2GQL3 Cluster: Putative uncharacterized protein; n=1;
           Chaetomium globosum|Rep: Putative uncharacterized
           protein - Chaetomium globosum (Soil fungus)
          Length = 441

 Score = 43.2 bits (97), Expect = 0.007
 Identities = 21/41 (51%), Positives = 27/41 (65%)
 Frame = +1

Query: 4   VFEVDKEKGLILTELAEGVKVEDIVASTGCEFNVAQKIKTM 126
           VF+VD  KGL L E+A+GV V++I A T   F VA  +K M
Sbjct: 400 VFDVDFAKGLTLIEIADGVTVDEIKAKTEAPFKVADDLKPM 440


>UniRef50_Q8RGL8 Cluster: Butyrate-acetoacetate CoA-transferase
           subunit B; n=3; Bacteria|Rep: Butyrate-acetoacetate
           CoA-transferase subunit B - Fusobacterium nucleatum
           subsp. nucleatum
          Length = 219

 Score = 40.7 bits (91), Expect = 0.039
 Identities = 22/42 (52%), Positives = 27/42 (64%)
 Frame = +1

Query: 1   CVFEVDKEKGLILTELAEGVKVEDIVASTGCEFNVAQKIKTM 126
           C FEV  +KGL+L ELA G  VEDI A T  +F +A +I  M
Sbjct: 178 CYFEVT-DKGLVLKELAPGYTVEDIKACTEADFILADEIGVM 218


>UniRef50_Q55DK3 Cluster: Putative uncharacterized protein; n=1;
           Dictyostelium discoideum AX4|Rep: Putative
           uncharacterized protein - Dictyostelium discoideum AX4
          Length = 469

 Score = 36.7 bits (81), Expect = 0.63
 Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 7/68 (10%)
 Frame = -3

Query: 243 NNKIKNGYT-------IKNIFDNVSYLLFVVITFLFCDCFGSGDVTHRFYFLCYVKLATS 85
           NNKIK   T       +KN+F + +Y  F+VI +L    F + D+T  FY+ C      S
Sbjct: 273 NNKIKISNTTTNPIKLVKNLFTSNTYFSFIVIIYLLIS-FATCDITLIFYYYCSFVYEWS 331

Query: 84  ARNNIFHF 61
            ++N   F
Sbjct: 332 PKDNSIFF 339


>UniRef50_Q4Q7A2 Cluster: Succinyl-coa:3-ketoacid-coenzyme a
           transferase-like protein; n=5; Leishmania|Rep:
           Succinyl-coa:3-ketoacid-coenzyme a transferase-like
           protein - Leishmania major
          Length = 499

 Score = 35.5 bits (78), Expect = 1.5
 Identities = 20/45 (44%), Positives = 27/45 (60%), Gaps = 4/45 (8%)
 Frame = +1

Query: 4   VFEVDKEKG----LILTELAEGVKVEDIVASTGCEFNVAQKIKTM 126
           VF V K  G    L+LTE+AEG+ VE++   T   F V+  +KTM
Sbjct: 446 VFVVKKAAGGVRSLVLTEIAEGLTVEEVKLKTEAPFAVSADLKTM 490


>UniRef50_Q8I2U7 Cluster: Putative uncharacterized protein PFI1010w;
            n=1; Plasmodium falciparum 3D7|Rep: Putative
            uncharacterized protein PFI1010w - Plasmodium falciparum
            (isolate 3D7)
          Length = 1354

 Score = 35.1 bits (77), Expect = 1.9
 Identities = 28/86 (32%), Positives = 42/86 (48%), Gaps = 10/86 (11%)
 Frame = -3

Query: 336  PFKPQHIIKFQYRCEILQ*ISFGMNFLMIR*NNKIKNGYTIKNIF---DNVSYLLF---- 178
            PFK  H++KF Y   +L  + F  N  +IR  ++I    T  NIF   D  SY L+    
Sbjct: 937  PFKNVHLLKFVYNIYLLS-LLFYKNMDVIRIASEIAYDLTDTNIFSFIDQYSYYLYDDIY 995

Query: 177  -VVITFLFCDCFGSG--DVTHRFYFL 109
             ++ TF +   F     D+  +F+FL
Sbjct: 996  IIIKTFKYISFFSIDLIDIWKKFFFL 1021


>UniRef50_Q01Q71 Cluster: Undecaprenyl-phosphate galactose
           phosphotransferase; n=1; Solibacter usitatus
           Ellin6076|Rep: Undecaprenyl-phosphate galactose
           phosphotransferase - Solibacter usitatus (strain
           Ellin6076)
          Length = 469

 Score = 34.7 bits (76), Expect = 2.5
 Identities = 16/32 (50%), Positives = 18/32 (56%)
 Frame = +2

Query: 14  WTKKKVLY*LNWQKALKWKILLRALVASLT*H 109
           W K  + Y  NW  AL WKILLR +   LT H
Sbjct: 435 WMKMDMQYIDNWSLALDWKILLRTIPRVLTGH 466


>UniRef50_UPI00015BD2B6 Cluster: UPI00015BD2B6 related cluster; n=1;
           unknown|Rep: UPI00015BD2B6 UniRef100 entry - unknown
          Length = 115

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 17/58 (29%), Positives = 29/58 (50%)
 Frame = -3

Query: 255 MIR*NNKIKNGYTIKNIFDNVSYLLFVVITFLFCDCFGSGDVTHRFYFLCYVKLATSA 82
           MI+     K G T+  +  +++ L   VITF     F + D  +RF + C   +A++A
Sbjct: 1   MIKTQKHEKLGLTVTEVMVSIALLAIGVITFAAMQSFFANDTKNRFIYGCLTTIASNA 58


>UniRef50_Q4J7K9 Cluster: Membrane protein; n=2; cellular
           organisms|Rep: Membrane protein - Sulfolobus
           acidocaldarius
          Length = 816

 Score = 33.5 bits (73), Expect = 5.9
 Identities = 16/39 (41%), Positives = 22/39 (56%)
 Frame = -2

Query: 730 LQAHFTGKVQSISTETLQYLNLGFTNNSILNRLRKYLFV 614
           LQ  +TG   SI  +  QY +L + N  ILN+L  +L V
Sbjct: 250 LQTKYTGTSHSILQDIEQYYSLNYVNYDILNKLEYWLLV 288


>UniRef50_Q4J5A0 Cluster: Putative uncharacterized protein; n=1;
           Azotobacter vinelandii AvOP|Rep: Putative
           uncharacterized protein - Azotobacter vinelandii AvOP
          Length = 477

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 17/31 (54%), Positives = 23/31 (74%), Gaps = 1/31 (3%)
 Frame = -1

Query: 104 TLNSQPVLATISSTLTPSANSVNIR-PFSLS 15
           T++   VLATISSTLTP A S++ + P S+S
Sbjct: 446 TISRPAVLATISSTLTPGARSLSTKAPLSIS 476


>UniRef50_Q11E33 Cluster: Coenzyme A transferase; n=2;
           Proteobacteria|Rep: Coenzyme A transferase -
           Mesorhizobium sp. (strain BNC1)
          Length = 256

 Score = 33.1 bits (72), Expect = 7.8
 Identities = 15/31 (48%), Positives = 21/31 (67%)
 Frame = +1

Query: 4   VFEVDKEKGLILTELAEGVKVEDIVASTGCE 96
           VFE D+EK L +  L  GV  +D++A+TG E
Sbjct: 193 VFEFDEEKNLQVRSLHPGVSQDDVMANTGFE 223


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 675,801,323
Number of Sequences: 1657284
Number of extensions: 12891971
Number of successful extensions: 29882
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 28512
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 29872
length of database: 575,637,011
effective HSP length: 99
effective length of database: 411,565,895
effective search space used: 63792713725
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)