Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4e09
         (387 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q65UU3 Cluster: Putative uncharacterized protein; n=2; ...    33   1.9  
UniRef50_Q4XGJ6 Cluster: Putative uncharacterized protein; n=1; ...    33   2.5  
UniRef50_Q9KE81 Cluster: BH0975 protein; n=2; Bacillus|Rep: BH09...    31   5.8  

>UniRef50_Q65UU3 Cluster: Putative uncharacterized protein; n=2;
           Pasteurellaceae|Rep: Putative uncharacterized protein -
           Mannheimia succiniciproducens (strain MBEL55E)
          Length = 449

 Score = 33.1 bits (72), Expect = 1.9
 Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 2/50 (4%)
 Frame = -3

Query: 358 LLHSIYLGLCX*ILKNXF--SGFRCFRGLQIFIKFVEAVYHRAKVFLNSL 215
           LL  I+LGLC   + N F  S F  F G+ +F+ F+E + +  + F+NSL
Sbjct: 10  LLIIIFLGLCIVTIDNIFIVSDFVLF-GIFLFLLFLEVIINPKRNFINSL 58


>UniRef50_Q4XGJ6 Cluster: Putative uncharacterized protein; n=1;
           Plasmodium chabaudi|Rep: Putative uncharacterized
           protein - Plasmodium chabaudi
          Length = 37

 Score = 32.7 bits (71), Expect = 2.5
 Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 1/33 (3%)
 Frame = -3

Query: 259 VEAVYHRAKVFLNSLRGQGGF-NFFPQFLNCXL 164
           +E  YH    FLN L G   F NFFP FL+C L
Sbjct: 1   MEIFYHFVFFFLNPLNGLYIFDNFFPHFLSCHL 33


>UniRef50_Q9KE81 Cluster: BH0975 protein; n=2; Bacillus|Rep: BH0975
            protein - Bacillus halodurans
          Length = 1489

 Score = 31.5 bits (68), Expect = 5.8
 Identities = 22/71 (30%), Positives = 31/71 (43%), Gaps = 3/71 (4%)
 Frame = +2

Query: 110  KRXAPXEXNSLNTLAESAKXTIEELREKVEXALAPETVKKNFGX---MVDSFNEFYKNLK 280
            K   P     L    E  K  +EE R + + AL   T    F     ++DSFNEF K L 
Sbjct: 1331 KALYPTNAEELQHAVEELKQVMEERRMQYDEALQAGTEIPQFRPYLFVIDSFNEFKKMLG 1390

Query: 281  PAEAPKAXEVI 313
             ++ P   E++
Sbjct: 1391 VSKEPAFAEMM 1401


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 287,841,789
Number of Sequences: 1657284
Number of extensions: 4050834
Number of successful extensions: 8311
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 8214
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8311
length of database: 575,637,011
effective HSP length: 91
effective length of database: 424,824,167
effective search space used: 15718494179
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)