Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4e06
(317 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26; B... 77 1e-13
UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181; ... 69 3e-11
UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941; ... 65 2e-10
UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861; ... 65 2e-10
UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1; Peri... 64 4e-10
UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498... 64 4e-10
UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455; ... 58 4e-08
UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126; ... 57 7e-08
UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388; ... 56 1e-07
UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30; P... 52 2e-06
UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179; ... 51 4e-06
UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia polym... 51 6e-06
UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;... 50 1e-05
UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI... 48 3e-05
UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI... 48 3e-05
UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI... 48 3e-05
UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI... 48 3e-05
UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;... 47 9e-05
UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106; ... 46 2e-04
UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1; Wa... 44 5e-04
UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15; F... 43 0.002
UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3; Alphaproteob... 41 0.006
UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2 pol... 41 0.006
UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1; Na... 39 0.025
UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9; Co... 39 0.025
UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein; ... 39 0.025
UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825; ... 39 0.025
UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alp... 39 0.025
UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4 pre... 39 0.025
UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia polym... 38 0.043
UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase, sub... 38 0.043
UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa gro... 37 0.076
UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia lipolyti... 37 0.076
UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2; Ya... 37 0.076
UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=... 37 0.100
UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular or... 36 0.13
UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida stellata|... 36 0.17
UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida stellata|... 36 0.17
UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|R... 36 0.17
UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|R... 36 0.17
UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1; Mu... 36 0.23
UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa group|... 36 0.23
UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|R... 35 0.30
UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1; Ae... 35 0.30
UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;... 35 0.30
UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1; Kluyver... 35 0.40
UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42; N... 34 0.53
UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2; Eu... 34 0.70
UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16; B... 33 0.93
UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4... 33 0.93
UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC 1.9.... 33 1.6
UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3; Bacteria|... 32 2.8
UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3; Ha... 32 2.8
UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3 pre... 32 2.8
UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93; A... 32 2.8
UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2; Cystobacteri... 31 3.8
UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=... 31 3.8
UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7; Eu... 31 3.8
UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit... 31 5.0
UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1; Pl... 31 5.0
UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2; Roseiflexus|... 31 5.0
UniRef50_Q93ZD2 Cluster: AT5g63780/MBK5_26; n=4; Magnoliophyta|R... 31 5.0
UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol oxid... 31 5.0
UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-) ... 31 6.6
UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;... 31 6.6
UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1; Aq... 30 8.7
UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1; M... 30 8.7
UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=... 30 8.7
UniRef50_A5IY58 Cluster: Alkylphosphonate ABC transporter, subst... 30 8.7
UniRef50_Q96L91 Cluster: E1A-binding protein p400; n=16; Amniota... 30 8.7
UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.... 30 8.7
>UniRef50_Q4FH11 Cluster: Cytochrome c oxidase subunit I; n=26;
Bilateria|Rep: Cytochrome c oxidase subunit I - Samia
cynthia ricini (Indian eri silkmoth)
Length = 510
Score = 76.6 bits (180), Expect = 1e-13
Identities = 39/60 (65%), Positives = 40/60 (66%)
Frame = -1
Query: 305 RK*IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAF 126
RK +YSTNHKDIGTLY RAELG PGSLIGDDQIYNTIVTAHAF
Sbjct: 1 RKWLYSTNHKDIGTLYFIFGIWAGMVGTSLSLLIRAELGTPGSLIGDDQIYNTIVTAHAF 60
Score = 42.7 bits (96), Expect = 0.002
Identities = 19/26 (73%), Positives = 22/26 (84%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N LVPL+LGAPD AFPR+NN+ F LL
Sbjct: 77 NWLVPLMLGAPDMAFPRMNNMSFWLL 102
>UniRef50_Q9MCX7 Cluster: Cytochrome c oxidase subunit I; n=181;
Coelomata|Rep: Cytochrome c oxidase subunit I - Piculus
rubiginosus
Length = 504
Score = 68.5 bits (160), Expect = 3e-11
Identities = 33/57 (57%), Positives = 37/57 (64%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAF 126
++STNHKDIGTLY RAELG PG+L+GDDQIYN IVTAHAF
Sbjct: 8 LFSTNHKDIGTLYLIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQIYNVIVTAHAF 64
Score = 40.3 bits (90), Expect = 0.008
Identities = 17/25 (68%), Positives = 21/25 (84%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXL 4
N LVPL++GAPD AFPR+NN+ F L
Sbjct: 81 NWLVPLMIGAPDMAFPRMNNMSFWL 105
>UniRef50_Q6ZLV6 Cluster: Cytochrome c oxidase subunit I; n=941;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Ophisurus macrorhynchos
Length = 546
Score = 65.3 bits (152), Expect = 2e-10
Identities = 32/56 (57%), Positives = 35/56 (62%)
Frame = -1
Query: 293 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAF 126
+STNHKDIGTLY RAEL PG+L+GDDQIYN IVTAHAF
Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAF 63
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N LVPL++GAPD AFPR+NN+ F LL
Sbjct: 80 NWLVPLMIGAPDMAFPRMNNMSFWLL 105
>UniRef50_Q9MIY8 Cluster: Cytochrome c oxidase subunit 1; n=861;
root|Rep: Cytochrome c oxidase subunit 1 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 516
Score = 65.3 bits (152), Expect = 2e-10
Identities = 32/56 (57%), Positives = 35/56 (62%)
Frame = -1
Query: 293 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAF 126
+STNHKDIGTLY RAEL PG+L+GDDQIYN IVTAHAF
Sbjct: 8 FSTNHKDIGTLYLVFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAF 63
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N LVPL++GAPD AFPR+NN+ F LL
Sbjct: 80 NWLVPLMIGAPDMAFPRMNNMSFWLL 105
>UniRef50_A6BM65 Cluster: Cytochrome oxidase subunit I; n=1;
Periclimenes thermohydrophilus|Rep: Cytochrome oxidase
subunit I - Periclimenes thermohydrophilus
Length = 217
Score = 64.5 bits (150), Expect = 4e-10
Identities = 35/52 (67%), Positives = 38/52 (73%)
Frame = +1
Query: 112 KKIIIKACAVTIVL*I*SSPINDPGFPNSARIKSLKDVPIIPDQIPKIKYNV 267
KKII KA AVT+ L I S PI PG PNSARIKSL DVP +P PK+KYNV
Sbjct: 167 KKIITKAWAVTMTL-IWSFPIKLPGCPNSARIKSLSDVPTMPAHAPKMKYNV 217
Score = 56.0 bits (129), Expect = 2e-07
Identities = 23/28 (82%), Positives = 27/28 (96%)
Frame = +2
Query: 8 QNLILFIRGNAISGAPSIRGTNQFPNPP 91
QNL+LFIRGNA+SGAP++ GTNQFPNPP
Sbjct: 132 QNLMLFIRGNAMSGAPNMSGTNQFPNPP 159
>UniRef50_P00395 Cluster: Cytochrome c oxidase subunit 1; n=44498;
root|Rep: Cytochrome c oxidase subunit 1 - Homo sapiens
(Human)
Length = 513
Score = 64.5 bits (150), Expect = 4e-10
Identities = 31/57 (54%), Positives = 36/57 (63%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAF 126
++STNHKDIGTLY RAELG PG+L+G+D IYN IVTAHAF
Sbjct: 7 LFSTNHKDIGTLYLLFGAWAGVLGTALSLLIRAELGQPGNLLGNDHIYNVIVTAHAF 63
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N LVPL++GAPD AFPR+NN+ F LL
Sbjct: 80 NWLVPLMIGAPDMAFPRMNNMSFWLL 105
>UniRef50_Q8SK39 Cluster: Cytochrome c oxidase subunit I; n=455;
cellular organisms|Rep: Cytochrome c oxidase subunit I -
Pandaka lidwilli
Length = 507
Score = 58.0 bits (134), Expect = 4e-08
Identities = 29/52 (55%), Positives = 31/52 (59%)
Frame = -1
Query: 281 HKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAF 126
HKDIGTLY RAEL PG+L+GDDQIYN IVTAHAF
Sbjct: 1 HKDIGTLYLIFGAWAGMVGTALSLLIRAELSQPGALLGDDQIYNVIVTAHAF 52
Score = 41.5 bits (93), Expect = 0.004
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N L+PL++GAPD AFPR+NN+ F LL
Sbjct: 69 NWLIPLMIGAPDMAFPRMNNMSFWLL 94
>UniRef50_A2T435 Cluster: Cytochrome c oxidase subunit I; n=126;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Placozoan sp. BZ2423
Length = 498
Score = 57.2 bits (132), Expect = 7e-08
Identities = 27/56 (48%), Positives = 33/56 (58%)
Frame = -1
Query: 293 YSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAF 126
+S NHKDIG+LY R EL +PGS++GDD +YN IVTAHAF
Sbjct: 9 FSCNHKDIGSLYLVFGALSGAIGTAFSMLIRLELSSPGSMLGDDHLYNVIVTAHAF 64
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N VPL++GAPD AFPR+NNI F LL
Sbjct: 81 NWFVPLMIGAPDMAFPRLNNISFWLL 106
>UniRef50_Q951H1 Cluster: Cytochrome c oxidase subunit I; n=388;
Coelomata|Rep: Cytochrome c oxidase subunit I - Picoides
borealis
Length = 513
Score = 56.4 bits (130), Expect = 1e-07
Identities = 30/57 (52%), Positives = 33/57 (57%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAF 126
+ STNHKD GTL RAELG PG+L+GDDQ N IVTAHAF
Sbjct: 8 LXSTNHKDXGTLXXIFGAWAGMIGTALSLLIRAELGQPGTLLGDDQXXNVIVTAHAF 64
Score = 41.9 bits (94), Expect = 0.003
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N LVPL++GAPD AFPR+NN+ F LL
Sbjct: 81 NWLVPLMIGAPDMAFPRMNNMSFWLL 106
>UniRef50_Q30DC3 Cluster: Cytochrome c oxidase subunit I; n=30;
Panarthropoda|Rep: Cytochrome c oxidase subunit I -
Pagyris cymothoe
Length = 487
Score = 52.4 bits (120), Expect = 2e-06
Identities = 23/24 (95%), Positives = 23/24 (95%)
Frame = -1
Query: 197 ELGNPGSLIGDDQIYNTIVTAHAF 126
ELG PGSLIGDDQIYNTIVTAHAF
Sbjct: 13 ELGTPGSLIGDDQIYNTIVTAHAF 36
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N L+PL+LGAPD AFPR+NN+ F LL
Sbjct: 53 NWLIPLMLGAPDMAFPRMNNMSFWLL 78
>UniRef50_P48866 Cluster: Cytochrome c oxidase subunit 1; n=179;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Chondrus crispus (Carragheen)
Length = 532
Score = 51.2 bits (117), Expect = 4e-06
Identities = 27/59 (45%), Positives = 33/59 (55%), Gaps = 2/59 (3%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAF 126
I+STNHKDIGTLY R EL P + L+G+ QIYN ++TAHAF
Sbjct: 13 IFSTNHKDIGTLYLIFGAFSGVLGGCMSMLIRMELAQPSNHLLLGNHQIYNVLITAHAF 71
Score = 41.5 bits (93), Expect = 0.004
Identities = 17/26 (65%), Positives = 22/26 (84%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N LVP+++G+PD AFPR+NNI F LL
Sbjct: 88 NWLVPIMIGSPDMAFPRLNNISFWLL 113
>UniRef50_Q35061 Cluster: CoxI intron4 ORF; n=3; Marchantia
polymorpha|Rep: CoxI intron4 ORF - Marchantia polymorpha
(Liverwort)
Length = 434
Score = 50.8 bits (116), Expect = 6e-06
Identities = 27/64 (42%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Frame = -1
Query: 311 F*RK*IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLI--GDDQIYNTIVT 138
F ++ ++STNHKDIGTLY R EL PG+ I G+ Q+YN ++T
Sbjct: 4 FAQRWLFSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYNVLIT 63
Query: 137 AHAF 126
AHAF
Sbjct: 64 AHAF 67
Score = 40.3 bits (90), Expect = 0.008
Identities = 16/26 (61%), Positives = 21/26 (80%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N VP+++G+PD AFPR+NNI F LL
Sbjct: 84 NWFVPILIGSPDMAFPRLNNISFWLL 109
>UniRef50_P60620 Cluster: Cytochrome c oxidase subunit 1; n=2931;
cellular organisms|Rep: Cytochrome c oxidase subunit 1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 527
Score = 50.0 bits (114), Expect = 1e-05
Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLI--GDDQIYNTIVTAHAF 126
++STNHKDIGTLY R EL PG I G+ Q+YN ++TAHAF
Sbjct: 8 LFSTNHKDIGTLYFIFGAIAGVMGTCFSVLIRMELARPGDQILGGNHQLYNVLITAHAF 66
Score = 41.5 bits (93), Expect = 0.004
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N VP+++GAPD AFPR+NNI F LL
Sbjct: 83 NWFVPILIGAPDMAFPRLNNISFWLL 108
>UniRef50_Q0H8Y3 Cluster: Probable intron-encoded endonuclease aI8
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI8 (EC
3.1.-.-)]; n=103; Eukaryota|Rep: Probable intron-encoded
endonuclease aI8 precursor [Contains: Truncated
non-functional cytochrome oxidase 1; Intron-encoded
endonuclease aI8 (EC 3.1.-.-)] - Ustilago maydis (Smut
fungus)
Length = 645
Score = 48.4 bits (110), Expect = 3e-05
Identities = 28/59 (47%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAF 126
+YSTN KDIGTLY R EL PG L GD Q+YN I+TAHAF
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAF 63
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N LVP+++GAPD AFPR+NNI F LL
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLL 105
>UniRef50_Q0H8Y1 Cluster: Probable intron-encoded endonuclease aI5
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI5 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI5 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI5 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 536
Score = 48.4 bits (110), Expect = 3e-05
Identities = 28/59 (47%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAF 126
+YSTN KDIGTLY R EL PG L GD Q+YN I+TAHAF
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAF 63
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N LVP+++GAPD AFPR+NNI F LL
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLL 105
>UniRef50_Q0H8Y0 Cluster: Probable intron-encoded endonuclease aI4
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI4 (EC
3.1.-.-)]; n=3; Basidiomycota|Rep: Probable
intron-encoded endonuclease aI4 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI4 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 530
Score = 48.4 bits (110), Expect = 3e-05
Identities = 28/59 (47%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAF 126
+YSTN KDIGTLY R EL PG L GD Q+YN I+TAHAF
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAF 63
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N LVP+++GAPD AFPR+NNI F LL
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLL 105
>UniRef50_Q0H8X8 Cluster: Probable intron-encoded endonuclease aI2
precursor [Contains: Truncated non-functional cytochrome
oxidase 1; Intron-encoded endonuclease aI2 (EC
3.1.-.-)]; n=2; Ustilago maydis|Rep: Probable
intron-encoded endonuclease aI2 precursor [Contains:
Truncated non-functional cytochrome oxidase 1;
Intron-encoded endonuclease aI2 (EC 3.1.-.-)] - Ustilago
maydis (Smut fungus)
Length = 533
Score = 48.4 bits (110), Expect = 3e-05
Identities = 28/59 (47%), Positives = 31/59 (52%), Gaps = 2/59 (3%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHAF 126
+YSTN KDIGTLY R EL PG L GD Q+YN I+TAHAF
Sbjct: 5 LYSTNAKDIGTLYLIFAVFAAMIGTAFSVLIRMELAAPGVQYLNGDHQLYNVIITAHAF 63
Score = 42.3 bits (95), Expect = 0.002
Identities = 18/26 (69%), Positives = 22/26 (84%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N LVP+++GAPD AFPR+NNI F LL
Sbjct: 80 NYLVPVMIGAPDMAFPRLNNISFWLL 105
>UniRef50_Q5GGF4 Cluster: Cytochrome c oxidase subunit I; n=2742;
Bilateria|Rep: Cytochrome c oxidase subunit I - Cotesia
melitaearum (Parasitoid wasp)
Length = 499
Score = 46.8 bits (106), Expect = 9e-05
Identities = 20/24 (83%), Positives = 23/24 (95%)
Frame = -1
Query: 197 ELGNPGSLIGDDQIYNTIVTAHAF 126
ELG PGSLIG+DQIYN+IVT+HAF
Sbjct: 24 ELGMPGSLIGNDQIYNSIVTSHAF 47
Score = 39.9 bits (89), Expect = 0.011
Identities = 16/26 (61%), Positives = 22/26 (84%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N L+PL+LG+PD +FPR+NN+ F LL
Sbjct: 64 NWLIPLMLGSPDMSFPRMNNMSFWLL 89
>UniRef50_Q58PB7 Cluster: Cytochrome c oxidase subunit I; n=106;
Bilateria|Rep: Cytochrome c oxidase subunit I -
Homalopoma maculosa
Length = 219
Score = 45.6 bits (103), Expect = 2e-04
Identities = 18/24 (75%), Positives = 21/24 (87%)
Frame = -1
Query: 197 ELGNPGSLIGDDQIYNTIVTAHAF 126
ELG PGS IG+DQ+YN +VTAHAF
Sbjct: 23 ELGQPGSFIGNDQLYNVVVTAHAF 46
Score = 41.5 bits (93), Expect = 0.004
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N LVPL+LGAPD AFPR+NN+ F L
Sbjct: 63 NWLVPLMLGAPDMAFPRLNNMSFWFL 88
>UniRef50_Q59IQ0 Cluster: Cytochrome c oxidase subunit I; n=1;
Watasenia scintillans|Rep: Cytochrome c oxidase subunit
I - Watasenia scintillans (Sparkling enope)
Length = 217
Score = 44.4 bits (100), Expect = 5e-04
Identities = 17/24 (70%), Positives = 20/24 (83%)
Frame = -1
Query: 197 ELGNPGSLIGDDQIYNTIVTAHAF 126
ELG PGSL+ DDQ+YN +VTAH F
Sbjct: 24 ELGQPGSLLNDDQLYNVVVTAHGF 47
Score = 39.9 bits (89), Expect = 0.011
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRF 10
N LVPL+LGAPD AFPR+NN+ F
Sbjct: 64 NWLVPLMLGAPDMAFPRMNNMSF 86
>UniRef50_Q8SHP5 Cluster: Cytochrome c oxidase subunit I; n=15;
Fungi/Metazoa group|Rep: Cytochrome c oxidase subunit I
- Trichoderma reesei (Hypocrea jecorina)
Length = 635
Score = 42.7 bits (96), Expect = 0.002
Identities = 24/55 (43%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Frame = -1
Query: 290 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPG-SLIGDDQIYNTIVTAHA 129
STN KDIGTLY R EL PG I ++Q+YN+I+TAHA
Sbjct: 37 STNAKDIGTLYLIFALFSGLLGTAFSVLIRLELSGPGVQFIANNQLYNSIITAHA 91
Score = 40.7 bits (91), Expect = 0.006
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N L+PL++G PD AFPR+NNI F LL
Sbjct: 109 NFLMPLMIGGPDMAFPRLNNISFWLL 134
>UniRef50_Q1NET5 Cluster: Cytochrome-c oxidase; n=3;
Alphaproteobacteria|Rep: Cytochrome-c oxidase -
Sphingomonas sp. SKA58
Length = 556
Score = 40.7 bits (91), Expect = 0.006
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N VP+++GAPD AFPR+NNI F LL
Sbjct: 120 NWFVPIMIGAPDMAFPRMNNISFWLL 145
Score = 31.1 bits (67), Expect = 5.0
Identities = 17/37 (45%), Positives = 17/37 (45%)
Frame = -1
Query: 290 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPG 180
STNHKDIGTLY RAEL PG
Sbjct: 33 STNHKDIGTLYLIFAIIAGIIGGAISGLMRAELAEPG 69
>UniRef50_A7UG06 Cluster: Cytochrome oxidase subunits 1 and 2
polyprotein; n=1; Phaeosphaeria nodorum SN15|Rep:
Cytochrome oxidase subunits 1 and 2 polyprotein -
Phaeosphaeria nodorum SN15
Length = 789
Score = 40.7 bits (91), Expect = 0.006
Identities = 23/55 (41%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Frame = -1
Query: 290 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPG-SLIGDDQIYNTIVTAHA 129
S+N KDIG LY R EL PG I D+Q+YN+I+TAHA
Sbjct: 9 SSNAKDIGVLYLIYALFAGLIGTAFSVLIRLELSGPGVQYIADNQLYNSIITAHA 63
Score = 36.7 bits (81), Expect = 0.100
Identities = 16/26 (61%), Positives = 19/26 (73%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N L+PL LG PD FPR+NNI + LL
Sbjct: 81 NFLLPLGLGGPDMGFPRLNNISYLLL 106
>UniRef50_Q9G8S1 Cluster: Cytochrome c oxidase subunit 1; n=1;
Naegleria gruberi|Rep: Cytochrome c oxidase subunit 1 -
Naegleria gruberi
Length = 633
Score = 38.7 bits (86), Expect = 0.025
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N VP+++GAPD +FPR+NN F LL
Sbjct: 84 NYFVPILIGAPDMSFPRLNNFSFWLL 109
>UniRef50_Q5W914 Cluster: Cytochrome c oxidase subunit I; n=9;
Coelomata|Rep: Cytochrome c oxidase subunit I - Lingula
unguis
Length = 573
Score = 38.7 bits (86), Expect = 0.025
Identities = 20/55 (36%), Positives = 27/55 (49%)
Frame = -1
Query: 290 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAHAF 126
S NHKDIGT+Y R EL +PG + +Y++I+T HAF
Sbjct: 11 SVNHKDIGTIYLYMGLWSGVFGLSLSHCMRIELSHPGEWLQVGYMYHSIMTMHAF 65
>UniRef50_Q8M352 Cluster: I-SceII DNA endonuclease-like protein;
n=1; Saccharomyces castellii|Rep: I-SceII DNA
endonuclease-like protein - Saccharomyces castellii
(Yeast)
Length = 598
Score = 38.7 bits (86), Expect = 0.025
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N ++PL++GA D AFPRINNI F LL
Sbjct: 81 NYMLPLMIGATDTAFPRINNIGFWLL 106
Score = 35.5 bits (78), Expect = 0.23
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHA 129
+YSTN KDI LY R EL PG L G++Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFLLALFSGMAGTAMSLIIRLELAAPGQQYLHGNNQLFNVLVVGHA 63
>UniRef50_Q1XA94 Cluster: Cytochrome c oxidase subunit I; n=825;
Eukaryota|Rep: Cytochrome c oxidase subunit I -
Paracoccidioides brasiliensis
Length = 710
Score = 38.7 bits (86), Expect = 0.025
Identities = 14/26 (53%), Positives = 21/26 (80%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N L+P+++G PD AFPR+NN+ + LL
Sbjct: 107 NFLLPILIGGPDMAFPRLNNVSYWLL 132
Score = 34.3 bits (75), Expect = 0.53
Identities = 20/54 (37%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Frame = -1
Query: 290 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPG-SLIGDDQIYNTIVTAH 132
S+N KDI LY R EL PG I D+Q+YN+I+T+H
Sbjct: 35 SSNAKDIAILYLIFALFSGLLGTAFSVLIRLELSGPGIQYIEDNQLYNSIITSH 88
>UniRef50_Q9ZZX1 Cluster: Intron-encoded DNA endonuclease aI5 alpha
precursor (DNA endonuclease I-SceIV) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI5 alpha (EC 3.1.-.-) (Intron-encoded
endonuclease I- SceIV)]; n=2; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI5 alpha precursor (DNA
endonuclease I-SceIV) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI5 alpha (EC 3.1.-.-) (Intron-encoded endonuclease I-
SceIV)] - Saccharomyces cerevisiae (Baker's yeast)
Length = 630
Score = 38.7 bits (86), Expect = 0.025
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N L+PL++GA D AFPRINNI F +L
Sbjct: 81 NYLLPLMIGATDTAFPRINNIAFWVL 106
Score = 36.7 bits (81), Expect = 0.100
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHA 129
+YSTN KDI LY R EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHA 63
>UniRef50_P03878 Cluster: Intron-encoded DNA endonuclease aI4
precursor (DNA endonuclease I- SceII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI4 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceII)]; n=4; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI4 precursor (DNA
endonuclease I- SceII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI4 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 556
Score = 38.7 bits (86), Expect = 0.025
Identities = 17/26 (65%), Positives = 21/26 (80%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N L+PL++GA D AFPRINNI F +L
Sbjct: 81 NYLLPLMIGATDTAFPRINNIAFWVL 106
Score = 36.7 bits (81), Expect = 0.100
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHA 129
+YSTN KDI LY R EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHA 63
>UniRef50_Q35062 Cluster: CoxI intron2 ORF; n=2; Marchantia
polymorpha|Rep: CoxI intron2 ORF - Marchantia polymorpha
(Liverwort)
Length = 802
Score = 37.9 bits (84), Expect = 0.043
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 2/56 (3%)
Frame = -1
Query: 311 F*RK*IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLI--GDDQIYN 150
F ++ ++STNHKDIGTLY R EL PG+ I G+ Q+YN
Sbjct: 4 FAQRWLFSTNHKDIGTLYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q18JR5 Cluster: Cytochrome-c-like terminal oxidase,
subunit I; n=2; Halobacteriaceae|Rep: Cytochrome-c-like
terminal oxidase, subunit I - Haloquadratum walsbyi
(strain DSM 16790)
Length = 634
Score = 37.9 bits (84), Expect = 0.043
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N L+PL++GA D AFPRIN I F LL
Sbjct: 161 NYLIPLLIGADDMAFPRINAIAFWLL 186
Score = 33.1 bits (72), Expect = 1.2
Identities = 16/53 (30%), Positives = 25/53 (47%)
Frame = -1
Query: 290 STNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLIGDDQIYNTIVTAH 132
+ +HKDIG LY R EL +PG + + YN+++T+H
Sbjct: 91 TVDHKDIGLLYGAFGLTAFAVGGLMVVLMRIELADPGMTVISNTFYNSLLTSH 143
>UniRef50_Q9B6E6 Cluster: COX1-i5 protein; n=3; Fungi/Metazoa
group|Rep: COX1-i5 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 608
Score = 37.1 bits (82), Expect = 0.076
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHA 129
++STN KDI LY R EL N GS L G+ Q +N ++TAHA
Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHA 68
Score = 36.7 bits (81), Expect = 0.100
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N L+PL+LGA D AF R+NNI F LL
Sbjct: 86 NYLMPLMLGASDMAFARLNNISFWLL 111
>UniRef50_Q9B6E4 Cluster: COX1-i3 protein; n=2; Yarrowia
lipolytica|Rep: COX1-i3 protein - Yarrowia lipolytica
(Candida lipolytica)
Length = 457
Score = 37.1 bits (82), Expect = 0.076
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHA 129
++STN KDI LY R EL N GS L G+ Q +N ++TAHA
Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHA 68
Score = 36.7 bits (81), Expect = 0.100
Identities = 17/26 (65%), Positives = 20/26 (76%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N L+PL+LGA D AF R+NNI F LL
Sbjct: 86 NYLMPLMLGASDMAFARLNNISFWLL 111
>UniRef50_Q9B6E2 Cluster: Cytochrome c oxidase subunit I; n=2;
Yarrowia lipolytica|Rep: Cytochrome c oxidase subunit I
- Yarrowia lipolytica (Candida lipolytica)
Length = 399
Score = 37.1 bits (82), Expect = 0.076
Identities = 22/58 (37%), Positives = 28/58 (48%), Gaps = 2/58 (3%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHA 129
++STN KDI LY R EL N GS L G+ Q +N ++TAHA
Sbjct: 11 LFSTNAKDIAVLYFIFALFSAMIGTGLSAIIRLELANTGSPFLHGNTQAFNVVITAHA 68
>UniRef50_P03876 Cluster: Putative COX1/OXI3 intron 2 protein; n=2;
Saccharomycetaceae|Rep: Putative COX1/OXI3 intron 2
protein - Saccharomyces cerevisiae (Baker's yeast)
Length = 854
Score = 36.7 bits (81), Expect = 0.100
Identities = 22/58 (37%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHA 129
+YSTN KDI LY R EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLVVGHA 63
>UniRef50_Q28SZ5 Cluster: Cytochrome-c oxidase; n=50; cellular
organisms|Rep: Cytochrome-c oxidase - Jannaschia sp.
(strain CCS1)
Length = 628
Score = 36.3 bits (80), Expect = 0.13
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXL 4
N +PL++GAPD AFPR+NN+ + +
Sbjct: 186 NYFMPLMIGAPDMAFPRLNNLSYWM 210
>UniRef50_Q6ED53 Cluster: Cox1-i5 protein; n=2; Candida
stellata|Rep: Cox1-i5 protein - Candida stellata (Yeast)
Length = 763
Score = 35.9 bits (79), Expect = 0.17
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N LVPL +G+ D AFPRINN+ F +L
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVL 123
>UniRef50_Q6ED52 Cluster: Cox1-i4 protein; n=1; Candida
stellata|Rep: Cox1-i4 protein - Candida stellata (Yeast)
Length = 676
Score = 35.9 bits (79), Expect = 0.17
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N LVPL +G+ D AFPRINN+ F +L
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVL 123
>UniRef50_Q6ED51 Cluster: Cox-i3 protein; n=1; Candida stellata|Rep:
Cox-i3 protein - Candida stellata (Yeast)
Length = 588
Score = 35.9 bits (79), Expect = 0.17
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N LVPL +G+ D AFPRINN+ F +L
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVL 123
>UniRef50_Q6ED50 Cluster: Cox-i2 protein; n=1; Candida stellata|Rep:
Cox-i2 protein - Candida stellata (Yeast)
Length = 586
Score = 35.9 bits (79), Expect = 0.17
Identities = 16/26 (61%), Positives = 20/26 (76%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N LVPL +G+ D AFPRINN+ F +L
Sbjct: 98 NYLVPLQIGSNDTAFPRINNLAFVVL 123
>UniRef50_A6XEV4 Cluster: Cytochrome c oxidase subunit 1; n=1;
Munidopsis verrucosus|Rep: Cytochrome c oxidase subunit
1 - Munidopsis verrucosus
Length = 154
Score = 35.5 bits (78), Expect = 0.23
Identities = 16/32 (50%), Positives = 16/32 (50%)
Frame = -2
Query: 103 TYYNWRIWKLXXXXXXXXXXXXIPTNK*YKIL 8
TYYNW IWKL P NK YKIL
Sbjct: 24 TYYNWWIWKLINSANVSGPWYGFPANKQYKIL 55
>UniRef50_Q7YEU6 Cluster: Endonuclease; n=4; Fungi/Metazoa
group|Rep: Endonuclease - Saccharomyces servazzii
(Yeast)
Length = 675
Score = 35.5 bits (78), Expect = 0.23
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHA 129
+YSTN KDI +Y R EL PGS L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDISIMYFMLALFSGMAGSAMSMIIRMELAAPGSQYLHGNSQLFNVLVVGHA 63
Score = 35.5 bits (78), Expect = 0.23
Identities = 15/26 (57%), Positives = 21/26 (80%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N ++PL++GA D +FPRIN+I F LL
Sbjct: 81 NYMLPLMIGATDMSFPRINSIGFWLL 106
>UniRef50_Q0R4Y4 Cluster: Maturase-like protein; n=2; Eukaryota|Rep:
Maturase-like protein - Pellia epiphylla
Length = 843
Score = 35.1 bits (77), Expect = 0.30
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = -1
Query: 311 F*RK*IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGSLI--GDDQIYN 150
F ++ ++STNHKDIGT Y R EL PG+ I G+ Q+YN
Sbjct: 4 FAQRWLFSTNHKDIGTPYLIFGAIAGVMGTCFSVLIRMELAQPGNQILGGNHQLYN 59
>UniRef50_Q3L2S5 Cluster: Cytochrome c oxidase subunit I; n=1;
Aedes cretinus|Rep: Cytochrome c oxidase subunit I -
Aedes cretinus
Length = 153
Score = 35.1 bits (77), Expect = 0.30
Identities = 14/21 (66%), Positives = 18/21 (85%)
Frame = -3
Query: 63 LILGAPDXAFPRINNIRFXLL 1
L+LGAPD AFPR+NN+ F +L
Sbjct: 1 LMLGAPDMAFPRMNNMSFWML 21
>UniRef50_Q2ABI9 Cluster: NADH-ubiquinone oxidoreductase chain 2;
n=21; Neocoleoidea|Rep: NADH-ubiquinone oxidoreductase
chain 2 - Sepia officinalis (Common cuttlefish)
Length = 375
Score = 35.1 bits (77), Expect = 0.30
Identities = 16/33 (48%), Positives = 21/33 (63%)
Frame = -3
Query: 300 MNLFYKS*RYWNIIFYFWYLIRNNWNIFKTFNS 202
M + KS YWNI+F+FWYLI ++ K NS
Sbjct: 339 MIILNKSQSYWNIMFHFWYLISFISHLAKINNS 371
>UniRef50_Q5K464 Cluster: Putative DNA endonuclease; n=1;
Kluyveromyces thermotolerans|Rep: Putative DNA
endonuclease - Kluyveromyces thermotolerans (Yeast)
Length = 542
Score = 34.7 bits (76), Expect = 0.40
Identities = 15/26 (57%), Positives = 20/26 (76%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N L+PL++GA D +F R+NNI F LL
Sbjct: 81 NYLLPLMIGASDMSFARLNNISFWLL 106
Score = 34.3 bits (75), Expect = 0.53
Identities = 21/58 (36%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAHA 129
+YSTN KDI LY R EL PG+ L G+ Q++N +V HA
Sbjct: 6 LYSTNAKDIAILYFIFAIFCGMAGTAMSVIIRLELAAPGNQYLGGNHQLFNVLVVGHA 63
>UniRef50_O47573 Cluster: Cytochrome c oxidase subunit I; n=42;
Nematoda|Rep: Cytochrome c oxidase subunit I -
Onchocerca volvulus
Length = 548
Score = 34.3 bits (75), Expect = 0.53
Identities = 13/23 (56%), Positives = 19/23 (82%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRF 10
N ++PL+LGAP+ AFPR+N + F
Sbjct: 91 NWMLPLMLGAPEMAFPRVNALSF 113
Score = 33.9 bits (74), Expect = 0.70
Identities = 19/57 (33%), Positives = 25/57 (43%), Gaps = 2/57 (3%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIVTAH 132
I + NHK IGT Y R EL +PG G Q+YN+++T H
Sbjct: 16 INTVNHKTIGTYYIVLGYWAGLGGSVLSMLIRFELSSPGGHLFFGSGQVYNSVLTMH 72
>UniRef50_Q2N1P8 Cluster: Cytochrome c oxidase subunit I; n=2;
Eutetramorium sp. BLF m1|Rep: Cytochrome c oxidase
subunit I - Eutetramorium sp. BLF m1
Length = 201
Score = 33.9 bits (74), Expect = 0.70
Identities = 14/24 (58%), Positives = 19/24 (79%)
Frame = -1
Query: 197 ELGNPGSLIGDDQIYNTIVTAHAF 126
EL GS++ +QIYNT+VT+HAF
Sbjct: 24 ELETCGSVLRSEQIYNTLVTSHAF 47
>UniRef50_Q0I8U1 Cluster: Cytochrome c oxidase subunit I; n=16;
Bacteria|Rep: Cytochrome c oxidase subunit I -
Synechococcus sp. (strain CC9311)
Length = 564
Score = 33.5 bits (73), Expect = 0.93
Identities = 13/26 (50%), Positives = 19/26 (73%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N L+P ++GAPD AFP++N F L+
Sbjct: 103 NLLIPTMIGAPDMAFPKLNAAAFWLV 128
>UniRef50_P33518 Cluster: Cytochrome c oxidase polypeptide 1; n=4;
Halobacteriaceae|Rep: Cytochrome c oxidase polypeptide 1
- Halobacterium salinarium (Halobacterium halobium)
Length = 593
Score = 33.5 bits (73), Expect = 0.93
Identities = 15/26 (57%), Positives = 18/26 (69%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N +PL++ A D AFPRIN I F LL
Sbjct: 135 NYFIPLLIDADDMAFPRINAIAFWLL 160
>UniRef50_Q06473 Cluster: Cytochrome c oxidase subunit 1 (EC
1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1);
n=59; Cyanobacteria|Rep: Cytochrome c oxidase subunit 1
(EC 1.9.3.1) (Cytochrome c oxidase polypeptide I)
(Cytochrome aa3 subunit 1) (Oxidase aa(3) subunit 1) -
Synechocystis sp. (strain PCC 6803)
Length = 551
Score = 32.7 bits (71), Expect = 1.6
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXL 4
N L+PL++G D AFPR+N + F L
Sbjct: 94 NYLIPLMVGTEDMAFPRLNAVAFWL 118
>UniRef50_A6C5X9 Cluster: Cytochrome caa3 oxidase; n=3;
Bacteria|Rep: Cytochrome caa3 oxidase - Planctomyces
maris DSM 8797
Length = 754
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXL 4
N VPL++GA D AFPR+N+ F +
Sbjct: 99 NYFVPLMIGARDVAFPRLNSFGFWM 123
>UniRef50_Q5V018 Cluster: Cytochrome c oxidase subunit I; n=3;
Halobacteriaceae|Rep: Cytochrome c oxidase subunit I -
Haloarcula marismortui (Halobacterium marismortui)
Length = 854
Score = 31.9 bits (69), Expect = 2.8
Identities = 14/25 (56%), Positives = 18/25 (72%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXL 4
N LVPL +GA D AFPR+N + + L
Sbjct: 89 NYLVPLQIGADDLAFPRLNALSYWL 113
>UniRef50_P03877 Cluster: Intron-encoded DNA endonuclease aI3
precursor (DNA endonuclease I- SceIII) [Contains:
Truncated non-functional cytochrome oxidase 1; DNA
endonuclease aI3 (EC 3.1.-.-) (Intron-encoded
endonuclease I-SceIII)]; n=5; Saccharomycetales|Rep:
Intron-encoded DNA endonuclease aI3 precursor (DNA
endonuclease I- SceIII) [Contains: Truncated
non-functional cytochrome oxidase 1; DNA endonuclease
aI3 (EC 3.1.-.-) (Intron-encoded endonuclease I-SceIII)]
- Saccharomyces cerevisiae (Baker's yeast)
Length = 403
Score = 31.9 bits (69), Expect = 2.8
Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 2/54 (3%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS--LIGDDQIYNTIV 141
+YSTN KDI LY R EL PGS L G+ Q++N +V
Sbjct: 6 LYSTNAKDIAVLYFMLAIFSGMAGTAMSLIIRLELAAPGSQYLHGNSQLFNVLV 59
>UniRef50_Q79VD7 Cluster: Cytochrome c oxidase subunit 1; n=93;
Actinobacteria (class)|Rep: Cytochrome c oxidase subunit
1 - Corynebacterium glutamicum (Brevibacterium flavum)
Length = 584
Score = 31.9 bits (69), Expect = 2.8
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXL 4
N ++PL +GAPD AFPR+N F +
Sbjct: 105 NYVLPLQIGAPDVAFPRLNAFGFWI 129
>UniRef50_A7HEB5 Cluster: Cytochrome-c oxidase; n=2;
Cystobacterineae|Rep: Cytochrome-c oxidase -
Anaeromyxobacter sp. Fw109-5
Length = 596
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRF 10
N L+PL++GA D AFPR+N F
Sbjct: 112 NLLIPLMIGARDMAFPRLNMYSF 134
>UniRef50_Q8ZXD1 Cluster: Cytochrome C oxidase subunit I /III; n=4;
cellular organisms|Rep: Cytochrome C oxidase subunit I
/III - Pyrobaculum aerophilum
Length = 800
Score = 31.5 bits (68), Expect = 3.8
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXL 4
N LVP ++GAPD +PRIN + F +
Sbjct: 86 NILVPKLIGAPDMYWPRINALSFWM 110
>UniRef50_P14544 Cluster: Cytochrome c oxidase subunit 1; n=7;
Eukaryota|Rep: Cytochrome c oxidase subunit 1 -
Leishmania tarentolae (Sauroleishmania tarentolae)
Length = 549
Score = 31.5 bits (68), Expect = 3.8
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXL 4
N +P++ G PD FPR+NN+ F +
Sbjct: 83 NYFIPVMAGFPDMVFPRLNNMSFWM 107
>UniRef50_Q7NQZ0 Cluster: Cytochrome o ubiquinol oxidase, subunit I;
n=22; Bacteria|Rep: Cytochrome o ubiquinol oxidase,
subunit I - Chromobacterium violaceum
Length = 680
Score = 31.1 bits (67), Expect = 5.0
Identities = 14/26 (53%), Positives = 19/26 (73%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N +VPL +GA D AFP +N++ F LL
Sbjct: 125 NIVVPLQIGARDVAFPFLNSLSFWLL 150
>UniRef50_A6C0L1 Cluster: Cytochrome c oxidase subunit I; n=1;
Planctomyces maris DSM 8797|Rep: Cytochrome c oxidase
subunit I - Planctomyces maris DSM 8797
Length = 606
Score = 31.1 bits (67), Expect = 5.0
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N L+PL++GA D AFP++N + + +
Sbjct: 118 NFLIPLMIGADDMAFPKLNMLSYWFM 143
>UniRef50_A5UVJ0 Cluster: Cytochrome-c oxidase; n=2;
Roseiflexus|Rep: Cytochrome-c oxidase - Roseiflexus sp.
RS-1
Length = 641
Score = 31.1 bits (67), Expect = 5.0
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXL 4
N +VPL++GA D AFPR+N + L
Sbjct: 98 NYMVPLMIGARDMAFPRLNALSIWL 122
>UniRef50_Q93ZD2 Cluster: AT5g63780/MBK5_26; n=4; Magnoliophyta|Rep:
AT5g63780/MBK5_26 - Arabidopsis thaliana (Mouse-ear
cress)
Length = 363
Score = 31.1 bits (67), Expect = 5.0
Identities = 11/29 (37%), Positives = 16/29 (55%)
Frame = -3
Query: 312 FLAKMNLFYKS*RYWNIIFYFWYLIRNNW 226
F+ + Y RYW I+F FW+L+ W
Sbjct: 324 FVVLTRIRYGPARYWAILFVFWFLVFGIW 352
>UniRef50_A0RZ19 Cluster: Heme/copper-type cytochrome/quinol
oxidase, subunit 1; n=2; Thermoprotei|Rep:
Heme/copper-type cytochrome/quinol oxidase, subunit 1 -
Cenarchaeum symbiosum
Length = 508
Score = 31.1 bits (67), Expect = 5.0
Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Frame = -1
Query: 296 IYSTNHKDIGTLYXXXXXXXXXXXXXXXXXXRAELGNPGS-LIGDDQIYNTIVTAH 132
++ST+H D+G LY RAEL PG+ I D +N + T H
Sbjct: 15 MFSTHHTDVGLLYLISSLGFLFLGGALALLIRAELFFPGTQFIADSMTFNRMFTVH 70
>UniRef50_P34956 Cluster: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1); n=45;
Bacillales|Rep: Quinol oxidase subunit 1 (EC 1.10.3.-)
(Quinol oxidase polypeptide I) (Quinol oxidase aa3-600,
subunit qoxB) (Oxidase aa(3)-600 subunit 1) - Bacillus
subtilis
Length = 649
Score = 30.7 bits (66), Expect = 6.6
Identities = 13/23 (56%), Positives = 17/23 (73%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRF 10
N +VPL +GA D AFP +NN+ F
Sbjct: 120 NVVVPLQIGARDVAFPYLNNLSF 142
>UniRef50_Q9YDX6 Cluster: Heme-copper oxidase subunit I+III; n=1;
Aeropyrum pernix|Rep: Heme-copper oxidase subunit I+III
- Aeropyrum pernix
Length = 815
Score = 30.7 bits (66), Expect = 6.6
Identities = 13/25 (52%), Positives = 18/25 (72%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXL 4
N +VPL +GA D AFPR+N + + L
Sbjct: 88 NYIVPLQIGARDLAFPRLNALSYWL 112
>UniRef50_O67935 Cluster: Cytochrome c oxidase subunit I; n=1;
Aquifex aeolicus|Rep: Cytochrome c oxidase subunit I -
Aquifex aeolicus
Length = 485
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRIN 22
N L+PL++GA D AFPR+N
Sbjct: 38 NFLLPLMIGAKDVAFPRLN 56
>UniRef50_Q1CZF1 Cluster: Cytochrome c oxidase, subunit I; n=1;
Myxococcus xanthus DK 1622|Rep: Cytochrome c oxidase,
subunit I - Myxococcus xanthus (strain DK 1622)
Length = 556
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/19 (63%), Positives = 16/19 (84%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRIN 22
N ++PL+LGA D AFPR+N
Sbjct: 110 NFMLPLMLGAKDVAFPRLN 128
>UniRef50_A7BSH8 Cluster: Cytochrome c oxidase aa3, subunit 1; n=1;
Beggiatoa sp. PS|Rep: Cytochrome c oxidase aa3, subunit
1 - Beggiatoa sp. PS
Length = 525
Score = 30.3 bits (65), Expect = 8.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXL 4
N +PL++GA D AFPR+N + L
Sbjct: 83 NYFIPLMIGAKDVAFPRVNALSVWL 107
>UniRef50_A5IY58 Cluster: Alkylphosphonate ABC transporter,
substrate-binding protein, predicted lipoprotein; n=1;
Mycoplasma agalactiae|Rep: Alkylphosphonate ABC
transporter, substrate-binding protein, predicted
lipoprotein - Mycoplasma agalactiae
Length = 438
Score = 30.3 bits (65), Expect = 8.7
Identities = 13/36 (36%), Positives = 19/36 (52%)
Frame = +1
Query: 19 IIYSWECXIWCS*YKRN*SISKSSNYNRYNYKKIII 126
I+ +WE W YK S KSS+ +Y Y+ I+
Sbjct: 226 IVKAWEAKKWEDFYKHGISYKKSSSAGKYKYQAAIL 261
>UniRef50_Q96L91 Cluster: E1A-binding protein p400; n=16; Amniota|Rep:
E1A-binding protein p400 - Homo sapiens (Human)
Length = 3160
Score = 30.3 bits (65), Expect = 8.7
Identities = 14/36 (38%), Positives = 21/36 (58%)
Frame = +1
Query: 163 SSPINDPGFPNSARIKSLKDVPIIPDQIPKIKYNVP 270
S+P+ PG PN A++ + D P Q PK++ VP
Sbjct: 3115 SAPLQTPGAPNPAQVPASSD---SPSQQPKLQMRVP 3147
>UniRef50_Q9WWR2 Cluster: Ubiquinol oxidase subunit 1 (EC 1.10.3.-)
(Ubiquinol oxidase polypeptide I) (Cytochrome o subunit
1) (Oxidase BO(3) subunit 1); n=240; Bacteria|Rep:
Ubiquinol oxidase subunit 1 (EC 1.10.3.-) (Ubiquinol
oxidase polypeptide I) (Cytochrome o subunit 1) (Oxidase
BO(3) subunit 1) - Pseudomonas putida
Length = 672
Score = 30.3 bits (65), Expect = 8.7
Identities = 14/26 (53%), Positives = 18/26 (69%)
Frame = -3
Query: 78 N*LVPLILGAPDXAFPRINNIRFXLL 1
N VPL +GA D AFP +N++ F LL
Sbjct: 124 NLAVPLQIGARDVAFPFLNSLSFYLL 149
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 239,031,397
Number of Sequences: 1657284
Number of extensions: 3602606
Number of successful extensions: 7596
Number of sequences better than 10.0: 71
Number of HSP's better than 10.0 without gapping: 7341
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7571
length of database: 575,637,011
effective HSP length: 82
effective length of database: 439,739,723
effective search space used: 10114013629
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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