Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4e06
         (317 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory recept...    22   1.8  
AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory recept...    22   1.8  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    20   5.5  
AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory recept...    19   9.5  

>AM292373-1|CAL23185.2|  360|Tribolium castaneum gustatory receptor
           candidate 52 protein.
          Length = 360

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 264 IIFYFWYLIRNNWNIF 217
           I+  FWY +  + NIF
Sbjct: 262 IVVIFWYTVNASTNIF 277


>AM292353-1|CAL23165.2|  651|Tribolium castaneum gustatory receptor
           candidate 32 protein.
          Length = 651

 Score = 21.8 bits (44), Expect = 1.8
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -3

Query: 264 IIFYFWYLIRNNWNIF 217
           I+  FWY +  + NIF
Sbjct: 262 IVVIFWYTVNASTNIF 277


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 20.2 bits (40), Expect = 5.5
 Identities = 9/24 (37%), Positives = 15/24 (62%)
 Frame = -2

Query: 316  FFFSENEFILQIIKILEHYILFLV 245
            F  ++  F+LQII  +  YI+ L+
Sbjct: 1420 FHVNKLHFLLQIIGGVTTYIIILI 1443


>AM292372-1|CAL23184.2|  771|Tribolium castaneum gustatory receptor
           candidate 51 protein.
          Length = 771

 Score = 19.4 bits (38), Expect = 9.5
 Identities = 4/8 (50%), Positives = 8/8 (100%)
 Frame = -3

Query: 258 FYFWYLIR 235
           FYFW++++
Sbjct: 137 FYFWFVLK 144


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 61,692
Number of Sequences: 336
Number of extensions: 1007
Number of successful extensions: 4
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4
length of database: 122,585
effective HSP length: 49
effective length of database: 106,121
effective search space used:  5942776
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 38 (20.3 bits)