Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4e05
         (669 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q8VUI7 Cluster: Cryptic plasmid DNA, complete sequence;...    34   2.7  
UniRef50_Q1DYU1 Cluster: Putative uncharacterized protein; n=1; ...    34   2.7  
UniRef50_Q1JY19 Cluster: Sporulation related; n=1; Desulfuromona...    34   3.6  
UniRef50_Q090T4 Cluster: Putative uncharacterized protein; n=1; ...    33   6.2  
UniRef50_A6WC62 Cluster: Amine oxidase; n=1; Kineococcus radioto...    33   8.2  
UniRef50_A1UFR2 Cluster: Putative uncharacterized protein; n=7; ...    33   8.2  

>UniRef50_Q8VUI7 Cluster: Cryptic plasmid DNA, complete sequence;
           n=1; Salmonella enterica subsp. enterica serovar
           Choleraesuis|Rep: Cryptic plasmid DNA, complete sequence
           - Salmonella enterica subsp. enterica serovar
           Choleraesuis
          Length = 114

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 22/56 (39%), Positives = 30/56 (53%), Gaps = 2/56 (3%)
 Frame = +1

Query: 355 IFTAGDHAHISALEK-TLISPSMLLEMTTAGLLGSQHSDIVVLGPL-TKFLKNQQP 516
           +F  GDH H   + K T +S  ML    TAG   S   D+ + GPL T + KN++P
Sbjct: 49  VFRRGDHRHRVVIGKDTRLSGYMLEPALTAGFT-SMGMDVFLFGPLPTTYRKNKRP 103


>UniRef50_Q1DYU1 Cluster: Putative uncharacterized protein; n=1;
           Coccidioides immitis|Rep: Putative uncharacterized
           protein - Coccidioides immitis
          Length = 943

 Score = 34.3 bits (75), Expect = 2.7
 Identities = 21/53 (39%), Positives = 28/53 (52%), Gaps = 1/53 (1%)
 Frame = +3

Query: 246 NDSEMVELQRRRVGGRAHGGLRECRGPVSVQRARGDYIHGR-RPRSHLCVGED 401
           N ++ VEL+RRR       GL  CR P S+   RG + + R +P S    GED
Sbjct: 523 NLAQQVELERRRTHMNRRRGLGGCRDPSSMNPPRGPWRNQRLQPTSPANEGED 575


>UniRef50_Q1JY19 Cluster: Sporulation related; n=1; Desulfuromonas
           acetoxidans DSM 684|Rep: Sporulation related -
           Desulfuromonas acetoxidans DSM 684
          Length = 247

 Score = 33.9 bits (74), Expect = 3.6
 Identities = 15/35 (42%), Positives = 21/35 (60%)
 Frame = +3

Query: 444 STRQSAFGYCGPRSFDEVPEEPAASDPYHDLLVPV 548
           S+ QSA    G     +V E+PA++DP  +LL PV
Sbjct: 73  SSEQSAMAEVGDEKASQVTEQPASNDPLRELLPPV 107


>UniRef50_Q090T4 Cluster: Putative uncharacterized protein; n=1;
           Stigmatella aurantiaca DW4/3-1|Rep: Putative
           uncharacterized protein - Stigmatella aurantiaca DW4/3-1
          Length = 419

 Score = 33.1 bits (72), Expect = 6.2
 Identities = 22/62 (35%), Positives = 27/62 (43%)
 Frame = +3

Query: 243 GNDSEMVELQRRRVGGRAHGGLRECRGPVSVQRARGDYIHGRRPRSHLCVGEDAHQSKHA 422
           GN   + EL+ +R+GG   GGLR  RG    +   G   HG R   H   G   H   H 
Sbjct: 67  GNAELLGELRVQRLGGVQLGGLRRGRG----RHGLGHRDHGHRSHGHRGHGHRGHGPGHR 122

Query: 423 AR 428
            R
Sbjct: 123 RR 124


>UniRef50_A6WC62 Cluster: Amine oxidase; n=1; Kineococcus
           radiotolerans SRS30216|Rep: Amine oxidase - Kineococcus
           radiotolerans SRS30216
          Length = 448

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 16/42 (38%), Positives = 20/42 (47%)
 Frame = +1

Query: 193 GRSVSFSAHCDICDSHLETIAKWLSCNGDVWGVGPTVVFASA 318
           G       H  + DSH E++A+WL   G V GV  T    SA
Sbjct: 62  GHRFDLGPHSFLSDSHPESVARWLDLAGAVGGVERTEAVRSA 103


>UniRef50_A1UFR2 Cluster: Putative uncharacterized protein; n=7;
           Actinomycetales|Rep: Putative uncharacterized protein -
           Mycobacterium sp. (strain KMS)
          Length = 314

 Score = 32.7 bits (71), Expect = 8.2
 Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 2/62 (3%)
 Frame = +1

Query: 241 LETIAKWLSCNGDVWGVGPTVVFASAAALFLYNE--LEATIFTAGDHAHISALEKTLISP 414
           LET+A     + ++W +G   + A+AAAL +     L A +   GD AH   LE  L+ P
Sbjct: 216 LETLAP-AEPDFELWELGHAALGAAAAALGMEAAEFLYARVDVIGDRAHARVLEVELVEP 274

Query: 415 SM 420
           S+
Sbjct: 275 SL 276


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,234,854
Number of Sequences: 1657284
Number of extensions: 13465752
Number of successful extensions: 37693
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 36463
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 37680
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 51239674196
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)