Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4e04
         (199 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_Q7UW45 Cluster: Putative uncharacterized protein; n=1; ...    32   2.8  
UniRef50_Q5AA19 Cluster: Possible DNA polymerase delta subunit; ...    32   2.8  
UniRef50_Q19XD5 Cluster: Gp132; n=2; unclassified Myoviridae|Rep...    31   4.9  

>UniRef50_Q7UW45 Cluster: Putative uncharacterized protein; n=1;
           Pirellula sp.|Rep: Putative uncharacterized protein -
           Rhodopirellula baltica
          Length = 130

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 12/24 (50%), Positives = 16/24 (66%)
 Frame = +2

Query: 116 EAVVFLNSPSSPTEPNPFKCNHPT 187
           EA+VF   PS P++P PF  + PT
Sbjct: 95  EAIVFARPPSHPSQPPPFHLSEPT 118


>UniRef50_Q5AA19 Cluster: Possible DNA polymerase delta subunit;
           n=1; Candida albicans|Rep: Possible DNA polymerase delta
           subunit - Candida albicans (Yeast)
          Length = 405

 Score = 31.9 bits (69), Expect = 2.8
 Identities = 14/28 (50%), Positives = 18/28 (64%)
 Frame = +2

Query: 116 EAVVFLNSPSSPTEPNPFKCNHPTGKKK 199
           E V+ +N PSSP +P P   N PT +KK
Sbjct: 138 EKVIPVNIPSSPVKPEPSHKNKPTEEKK 165


>UniRef50_Q19XD5 Cluster: Gp132; n=2; unclassified Myoviridae|Rep:
           Gp132 - Mycobacterium phage Catera
          Length = 948

 Score = 31.1 bits (67), Expect = 4.9
 Identities = 12/25 (48%), Positives = 19/25 (76%)
 Frame = -2

Query: 189 PVGWLHLKGLGSVGDEGLFKNTTAS 115
           P+GWL+ KG+ +V +E LF+N  A+
Sbjct: 786 PLGWLNSKGVATVENEWLFQNLIAA 810


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,087,257
Number of Sequences: 1657284
Number of extensions: 2424190
Number of successful extensions: 6144
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 5999
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6140
length of database: 575,637,011
effective HSP length: 45
effective length of database: 501,059,231
effective search space used: 10021184620
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)