Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4e04
         (199 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   0.90 
AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein p...    21   0.90 
AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein p...    21   0.90 
AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    20   2.1  
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    20   2.1  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    20   2.7  
AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory recept...    19   3.6  
AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory recept...    19   3.6  
AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.           19   6.3  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    18   8.4  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      18   8.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      18   8.4  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    18   8.4  
AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory recept...    18   8.4  
AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle pr...    18   8.4  

>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.4 bits (43), Expect = 0.90
 Identities = 8/31 (25%), Positives = 13/31 (41%)
 Frame = +2

Query: 95  YLQYNYNEAVVFLNSPSSPTEPNPFKCNHPT 187
           Y  Y+Y +   +  S  +P  P     +H T
Sbjct: 39  YSNYHYEDPYGYTGSEETPPSPQEVYYHHQT 69


>AF230313-1|AAF64147.1|  210|Tribolium castaneum labial protein
           protein.
          Length = 210

 Score = 21.4 bits (43), Expect = 0.90
 Identities = 8/31 (25%), Positives = 13/31 (41%)
 Frame = +2

Query: 95  YLQYNYNEAVVFLNSPSSPTEPNPFKCNHPT 187
           Y  Y+Y +   +  S  +P  P     +H T
Sbjct: 39  YSNYHYEDPYGYTGSEETPPSPQEVYYHHQT 69


>AF230312-1|AAF64146.1|  253|Tribolium castaneum labial protein
           protein.
          Length = 253

 Score = 21.4 bits (43), Expect = 0.90
 Identities = 8/31 (25%), Positives = 13/31 (41%)
 Frame = +2

Query: 95  YLQYNYNEAVVFLNSPSSPTEPNPFKCNHPT 187
           Y  Y+Y +   +  S  +P  P     +H T
Sbjct: 39  YSNYHYEDPYGYTGSEETPPSPQEVYYHHQT 69


>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 20.2 bits (40), Expect = 2.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 180 WLHLKGLGSVG 148
           W+ L+GLG  G
Sbjct: 407 WIQLRGLGECG 417


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 20.2 bits (40), Expect = 2.1
 Identities = 6/11 (54%), Positives = 8/11 (72%)
 Frame = -2

Query: 180 WLHLKGLGSVG 148
           W+ L+GLG  G
Sbjct: 407 WIQLRGLGECG 417


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 19.8 bits (39), Expect = 2.7
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +2

Query: 146 SPTEPNPFKCNH 181
           SP + +PF C H
Sbjct: 195 SPEDLDPFACTH 206


>AM292365-1|CAL23177.1|  313|Tribolium castaneum gustatory receptor
           candidate 44 protein.
          Length = 313

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 96  ICNIIIMKQLCF 131
           ICN +I   +CF
Sbjct: 160 ICNTVISATVCF 171


>AM292325-1|CAL23137.2|  309|Tribolium castaneum gustatory receptor
           candidate 4 protein.
          Length = 309

 Score = 19.4 bits (38), Expect = 3.6
 Identities = 6/12 (50%), Positives = 8/12 (66%)
 Frame = +3

Query: 96  ICNIIIMKQLCF 131
           ICN +I   +CF
Sbjct: 156 ICNTVISATVCF 167


>AF321227-2|AAK16422.1|  312|Tribolium castaneum Scr protein.
          Length = 312

 Score = 18.6 bits (36), Expect = 6.3
 Identities = 6/9 (66%), Positives = 8/9 (88%)
 Frame = +3

Query: 135 IAPHHLQNP 161
           +AP HLQ+P
Sbjct: 81  LAPTHLQSP 89


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 6/15 (40%), Positives = 11/15 (73%)
 Frame = +3

Query: 150 LQNPIPSNVTIQQEK 194
           +Q+ +P NV  ++EK
Sbjct: 118 IQDIVPQNVLDEEEK 132


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +2

Query: 140 PSSPTEPNPFKCNHP 184
           P +P   NP   N+P
Sbjct: 746 PRNPVGTNPHDINNP 760


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 6/15 (40%), Positives = 8/15 (53%)
 Frame = +2

Query: 140 PSSPTEPNPFKCNHP 184
           P +P   NP   N+P
Sbjct: 638 PRNPVGTNPHDINNP 652


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 150 LQNPIPSNVT 179
           L NPI SNVT
Sbjct: 559 LLNPILSNVT 568


>AM292345-1|CAL23157.2|  384|Tribolium castaneum gustatory receptor
           candidate 24 protein.
          Length = 384

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 8/10 (80%), Positives = 8/10 (80%)
 Frame = +3

Query: 150 LQNPIPSNVT 179
           L NPI SNVT
Sbjct: 284 LLNPILSNVT 293


>AJ518940-1|CAD57734.1|  361|Tribolium castaneum extradenticle
           protein.
          Length = 361

 Score = 18.2 bits (35), Expect = 8.4
 Identities = 6/8 (75%), Positives = 6/8 (75%)
 Frame = +3

Query: 147 HLQNPIPS 170
           HL NP PS
Sbjct: 252 HLSNPYPS 259


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 45,175
Number of Sequences: 336
Number of extensions: 716
Number of successful extensions: 20
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 18
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 44
effective length of database: 107,801
effective search space used:  2263821
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 34 (18.5 bits)