Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4e04
         (199 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_02_0290 + 15383473-15383669,15385057-15385267,15386389-153864...    25   6.4  

>08_02_0290 +
           15383473-15383669,15385057-15385267,15386389-15386440,
           15386545-15386863,15387022-15387121,15387391-15387657,
           15387780-15387857,15387943-15388032,15388119-15388168,
           15388267-15388366,15388777-15388875,15389023-15389136,
           15389238-15389412,15389726-15390132,15390565-15390639,
           15391412-15391438
          Length = 786

 Score = 25.4 bits (53), Expect = 6.4
 Identities = 11/52 (21%), Positives = 24/52 (46%)
 Frame = +2

Query: 29  TCNSFIKKYKDKNCIMV*KC*SYLQYNYNEAVVFLNSPSSPTEPNPFKCNHP 184
           T   F +++      ++ K  ++    Y +  + +++P  P EP P   +HP
Sbjct: 641 TDEGFFRRFFRLLLALIIKVFAFFHIAYGQQEMRVDNPLPPAEPEPTSDDHP 692


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,548,413
Number of Sequences: 37544
Number of extensions: 61748
Number of successful extensions: 147
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 147
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 147
length of database: 14,793,348
effective HSP length: 45
effective length of database: 13,103,868
effective search space used: 262077360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)