Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4e04
         (199 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z73976-2|CAA98285.1|  360|Caenorhabditis elegans Hypothetical pr...    26   3.2  
AC024831-5|AAK72076.1|  186|Caenorhabditis elegans Hypothetical ...    26   3.2  
Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical pr...    25   9.8  
Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical pr...    25   9.8  
U61288-1|AAB17543.1|  790|Caenorhabditis elegans CE protein.           25   9.8  
AF025451-2|AAK68202.1|  612|Caenorhabditis elegans Hypothetical ...    25   9.8  
AF025451-1|AAB71201.1|  610|Caenorhabditis elegans Hypothetical ...    25   9.8  

>Z73976-2|CAA98285.1|  360|Caenorhabditis elegans Hypothetical
           protein T07C12.6 protein.
          Length = 360

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 11/22 (50%), Positives = 14/22 (63%)
 Frame = -3

Query: 146 MRGYLKTQLLHYNYIADSFNTF 81
           ++ YLK QL HYN+I  S   F
Sbjct: 51  LKVYLKIQLFHYNFIILSIPMF 72


>AC024831-5|AAK72076.1|  186|Caenorhabditis elegans Hypothetical
           protein Y55F3C.5 protein.
          Length = 186

 Score = 26.2 bits (55), Expect = 3.2
 Identities = 10/33 (30%), Positives = 18/33 (54%)
 Frame = +2

Query: 65  NCIMV*KC*SYLQYNYNEAVVFLNSPSSPTEPN 163
           +C     C ++ +  YN A+VF+N+ S+    N
Sbjct: 22  SCTKAPNCLAFTESQYNIAIVFMNNTSNECSAN 54


>Z68008-5|CAD91696.1| 1160|Caenorhabditis elegans Hypothetical
           protein R08B4.1b protein.
          Length = 1160

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 95  YLQYNYNEAVVFLNSPSSPTEPNPF 169
           YLQ  +N+A +    P+ P++ NPF
Sbjct: 609 YLQPAFNQAPLPYQYPAQPSQFNPF 633


>Z68008-4|CAA92000.4| 1137|Caenorhabditis elegans Hypothetical
           protein R08B4.1a protein.
          Length = 1137

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 95  YLQYNYNEAVVFLNSPSSPTEPNPF 169
           YLQ  +N+A +    P+ P++ NPF
Sbjct: 609 YLQPAFNQAPLPYQYPAQPSQFNPF 633


>U61288-1|AAB17543.1|  790|Caenorhabditis elegans CE protein.
          Length = 790

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 10/25 (40%), Positives = 16/25 (64%)
 Frame = +2

Query: 95  YLQYNYNEAVVFLNSPSSPTEPNPF 169
           YLQ  +N+A +    P+ P++ NPF
Sbjct: 262 YLQPAFNQAPLPYQYPAQPSQFNPF 286


>AF025451-2|AAK68202.1|  612|Caenorhabditis elegans Hypothetical
           protein C24H12.5b protein.
          Length = 612

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 128 FLNSPSSPTEPNPFKCNHPTGKKK 199
           F +S  +PT  NPFK + P  K++
Sbjct: 43  FTDSCPAPTANNPFKVSSPQKKRQ 66


>AF025451-1|AAB71201.1|  610|Caenorhabditis elegans Hypothetical
           protein C24H12.5a protein.
          Length = 610

 Score = 24.6 bits (51), Expect = 9.8
 Identities = 10/24 (41%), Positives = 15/24 (62%)
 Frame = +2

Query: 128 FLNSPSSPTEPNPFKCNHPTGKKK 199
           F +S  +PT  NPFK + P  K++
Sbjct: 43  FTDSCPAPTANNPFKVSSPQKKRQ 66


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,204,935
Number of Sequences: 27780
Number of extensions: 63023
Number of successful extensions: 213
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 182
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 213
length of database: 12,740,198
effective HSP length: 45
effective length of database: 11,490,098
effective search space used: 229801960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)