Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4e02
         (728 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       63   2e-12
AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory recept...    25   0.63 
AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    22   5.8  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    22   5.8  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    22   5.8  
DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped prot...    21   7.7  
AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor ...    21   7.7  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 63.3 bits (147), Expect = 2e-12
 Identities = 43/178 (24%), Positives = 75/178 (42%)
 Frame = +3

Query: 6   CQIQKHSNRHTKEPMVITSTASTAFERVSLDLMGSLDVDNFNYKYILTLQCDLTKYVEAY 185
           CQ  K SNR  + P+          + V +D  G L        Y+  +    +K+++ Y
Sbjct: 175 CQKTKSSNRPHQGPLTPILYDHIG-DLVCVDFYGPLPTGRLGASYVFVVIDVFSKFLKLY 233

Query: 186 PLENKDTVSVARSFVNNFILRYGIPTEIITDQGTEFMSSVFTEICNLLHIKKLHSTAYHH 365
           PL        A+  + +F   Y  P  +++D GT+F+S+ +        I+   S+  H 
Sbjct: 234 PLRKATAKIAAKRLIEDFS-GYIKPKCVLSDHGTQFISNTWQNSLRAADIQPTLSSIRHP 292

Query: 366 ETLGGLENTHKVLGAYLRIQCDNNKTDWSSWLPFWCFSFNTTVHSETKYTPFELVFGK 539
           E+    E   + LG   R  C  N   W + L       N   H  T ++P+E+++G+
Sbjct: 293 ES-NPSERVMRELGRIFRAYCRENHASWVNHLSNIEDCLNYVPHISTGFSPYEILYGR 349


>AM292361-1|CAL23173.2|  373|Tribolium castaneum gustatory receptor
           candidate 40 protein.
          Length = 373

 Score = 25.0 bits (52), Expect = 0.63
 Identities = 19/70 (27%), Positives = 30/70 (42%)
 Frame = +3

Query: 327 LHIKKLHSTAYHHETLGGLENTHKVLGAYLRIQCDNNKTDWSSWLPFWCFSFNTTVHSET 506
           LH KK+  +A+    +  LE+   +L      +C+NN T    +       F    H   
Sbjct: 140 LH-KKIRYSAFGMIFVALLEHCFSMLNYVYSSKCENNSTGVEHF-------FKKQFHYIF 191

Query: 507 KYTPFELVFG 536
            Y P+ +VFG
Sbjct: 192 TYMPYNIVFG 201


>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 537 KHCNLPSNIEQNSYVDPLYNPD 602
           KH      + QN Y   +YNP+
Sbjct: 299 KHTQQHYQMNQNMYPGEMYNPE 320


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 537 KHCNLPSNIEQNSYVDPLYNPD 602
           KH      + QN Y   +YNP+
Sbjct: 247 KHTQQHYQMNQNMYPGEMYNPE 268


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/22 (36%), Positives = 11/22 (50%)
 Frame = +3

Query: 537 KHCNLPSNIEQNSYVDPLYNPD 602
           KH      + QN Y   +YNP+
Sbjct: 430 KHTQQHYQMNQNMYPGEMYNPE 451


>DQ414246-1|ABD63008.1|  126|Tribolium castaneum odd-skipped
           protein.
          Length = 126

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +3

Query: 573 SYVDPLYNPDSY 608
           SY DP YNP  Y
Sbjct: 32  SYCDPWYNPYYY 43


>AJ005083-1|CAB65469.1|  585|Tribolium castaneum signal receptor
           protein protein.
          Length = 585

 Score = 21.4 bits (43), Expect = 7.7
 Identities = 9/20 (45%), Positives = 13/20 (65%)
 Frame = +3

Query: 486 TTVHSETKYTPFELVFGKHC 545
           TT+H+  K T  E  +GK+C
Sbjct: 354 TTIHAGHKCTCPEGFYGKNC 373


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 157,800
Number of Sequences: 336
Number of extensions: 3322
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19467635
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)