Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4e02
(728 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces p... 71 1e-13
SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable element|Schizosa... 71 1e-13
SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyc... 71 1e-13
SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyce... 71 1e-13
SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable element|Schiz... 71 1e-13
SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomy... 71 1e-13
SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyc... 71 1e-13
SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyc... 71 1e-13
SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable element|Schizo... 71 1e-13
SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomy... 71 1e-13
SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable element|Schizos... 71 1e-13
SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces po... 31 0.22
SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces po... 28 1.2
SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain |Schizosaccha... 28 1.2
SPAC3G9.14 |sak1||transcriptional repressor Sak1|Schizosaccharom... 27 2.1
SPAC1805.14 |||sequence orphan|Schizosaccharomyces pombe|chr 1||... 26 4.8
SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MB... 26 4.8
SPCC663.11 |||ww domain binding protein 11 |Schizosaccharomyces ... 25 8.4
>SPAC9.04 |Tf2-1||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 71.3 bits (167), Expect = 1e-13
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 1/195 (0%)
Frame = +3
Query: 3 SCQIQKHSNRHTKEPMVITSTASTAFERVSLDLMGSLDVDNFNYKYILTLQCDLTKYVEA 182
+CQI K N P+ + +E +S+D + +L ++ Y + + +K
Sbjct: 959 TCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP-ESSGYNALFVVVDRFSKMAIL 1017
Query: 183 YPLENKDTVS-VARSFVNNFILRYGIPTEIITDQGTEFMSSVFTEICNLLHIKKLHSTAY 359
P T AR F I +G P EII D F S + + + + S Y
Sbjct: 1018 VPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPY 1077
Query: 360 HHETLGGLENTHKVLGAYLRIQCDNNKTDWSSWLPFWCFSFNTTVHSETKYTPFELVFGK 539
+T G E T++ + LR C + W + S+N +HS T+ TPFE+V +
Sbjct: 1078 RPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH-R 1136
Query: 540 HCNLPSNIEQNSYVD 584
+ S +E S+ D
Sbjct: 1137 YSPALSPLELPSFSD 1151
>SPBC9B6.02c |Tf2-9|SPBC9B6.02|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 71.3 bits (167), Expect = 1e-13
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 1/195 (0%)
Frame = +3
Query: 3 SCQIQKHSNRHTKEPMVITSTASTAFERVSLDLMGSLDVDNFNYKYILTLQCDLTKYVEA 182
+CQI K N P+ + +E +S+D + +L ++ Y + + +K
Sbjct: 959 TCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP-ESSGYNALFVVVDRFSKMAIL 1017
Query: 183 YPLENKDTVS-VARSFVNNFILRYGIPTEIITDQGTEFMSSVFTEICNLLHIKKLHSTAY 359
P T AR F I +G P EII D F S + + + + S Y
Sbjct: 1018 VPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPY 1077
Query: 360 HHETLGGLENTHKVLGAYLRIQCDNNKTDWSSWLPFWCFSFNTTVHSETKYTPFELVFGK 539
+T G E T++ + LR C + W + S+N +HS T+ TPFE+V +
Sbjct: 1078 RPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH-R 1136
Query: 540 HCNLPSNIEQNSYVD 584
+ S +E S+ D
Sbjct: 1137 YSPALSPLELPSFSD 1151
>SPAC13D1.01c |Tf2-7||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 71.3 bits (167), Expect = 1e-13
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 1/195 (0%)
Frame = +3
Query: 3 SCQIQKHSNRHTKEPMVITSTASTAFERVSLDLMGSLDVDNFNYKYILTLQCDLTKYVEA 182
+CQI K N P+ + +E +S+D + +L ++ Y + + +K
Sbjct: 959 TCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP-ESSGYNALFVVVDRFSKMAIL 1017
Query: 183 YPLENKDTVS-VARSFVNNFILRYGIPTEIITDQGTEFMSSVFTEICNLLHIKKLHSTAY 359
P T AR F I +G P EII D F S + + + + S Y
Sbjct: 1018 VPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPY 1077
Query: 360 HHETLGGLENTHKVLGAYLRIQCDNNKTDWSSWLPFWCFSFNTTVHSETKYTPFELVFGK 539
+T G E T++ + LR C + W + S+N +HS T+ TPFE+V +
Sbjct: 1078 RPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH-R 1136
Query: 540 HCNLPSNIEQNSYVD 584
+ S +E S+ D
Sbjct: 1137 YSPALSPLELPSFSD 1151
>SPAC27E2.08 |Tf2-6||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 71.3 bits (167), Expect = 1e-13
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 1/195 (0%)
Frame = +3
Query: 3 SCQIQKHSNRHTKEPMVITSTASTAFERVSLDLMGSLDVDNFNYKYILTLQCDLTKYVEA 182
+CQI K N P+ + +E +S+D + +L ++ Y + + +K
Sbjct: 959 TCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP-ESSGYNALFVVVDRFSKMAIL 1017
Query: 183 YPLENKDTVS-VARSFVNNFILRYGIPTEIITDQGTEFMSSVFTEICNLLHIKKLHSTAY 359
P T AR F I +G P EII D F S + + + + S Y
Sbjct: 1018 VPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPY 1077
Query: 360 HHETLGGLENTHKVLGAYLRIQCDNNKTDWSSWLPFWCFSFNTTVHSETKYTPFELVFGK 539
+T G E T++ + LR C + W + S+N +HS T+ TPFE+V +
Sbjct: 1078 RPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH-R 1136
Query: 540 HCNLPSNIEQNSYVD 584
+ S +E S+ D
Sbjct: 1137 YSPALSPLELPSFSD 1151
>SPAC19D5.09c |Tf2-8|SPAC13D1.02c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 71.3 bits (167), Expect = 1e-13
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 1/195 (0%)
Frame = +3
Query: 3 SCQIQKHSNRHTKEPMVITSTASTAFERVSLDLMGSLDVDNFNYKYILTLQCDLTKYVEA 182
+CQI K N P+ + +E +S+D + +L ++ Y + + +K
Sbjct: 959 TCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP-ESSGYNALFVVVDRFSKMAIL 1017
Query: 183 YPLENKDTVS-VARSFVNNFILRYGIPTEIITDQGTEFMSSVFTEICNLLHIKKLHSTAY 359
P T AR F I +G P EII D F S + + + + S Y
Sbjct: 1018 VPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPY 1077
Query: 360 HHETLGGLENTHKVLGAYLRIQCDNNKTDWSSWLPFWCFSFNTTVHSETKYTPFELVFGK 539
+T G E T++ + LR C + W + S+N +HS T+ TPFE+V +
Sbjct: 1078 RPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH-R 1136
Query: 540 HCNLPSNIEQNSYVD 584
+ S +E S+ D
Sbjct: 1137 YSPALSPLELPSFSD 1151
>SPAC2E1P3.03c |Tf2-3||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 71.3 bits (167), Expect = 1e-13
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 1/195 (0%)
Frame = +3
Query: 3 SCQIQKHSNRHTKEPMVITSTASTAFERVSLDLMGSLDVDNFNYKYILTLQCDLTKYVEA 182
+CQI K N P+ + +E +S+D + +L ++ Y + + +K
Sbjct: 959 TCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP-ESSGYNALFVVVDRFSKMAIL 1017
Query: 183 YPLENKDTVS-VARSFVNNFILRYGIPTEIITDQGTEFMSSVFTEICNLLHIKKLHSTAY 359
P T AR F I +G P EII D F S + + + + S Y
Sbjct: 1018 VPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPY 1077
Query: 360 HHETLGGLENTHKVLGAYLRIQCDNNKTDWSSWLPFWCFSFNTTVHSETKYTPFELVFGK 539
+T G E T++ + LR C + W + S+N +HS T+ TPFE+V +
Sbjct: 1078 RPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH-R 1136
Query: 540 HCNLPSNIEQNSYVD 584
+ S +E S+ D
Sbjct: 1137 YSPALSPLELPSFSD 1151
>SPAC26A3.13c |Tf2-4||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 71.3 bits (167), Expect = 1e-13
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 1/195 (0%)
Frame = +3
Query: 3 SCQIQKHSNRHTKEPMVITSTASTAFERVSLDLMGSLDVDNFNYKYILTLQCDLTKYVEA 182
+CQI K N P+ + +E +S+D + +L ++ Y + + +K
Sbjct: 959 TCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP-ESSGYNALFVVVDRFSKMAIL 1017
Query: 183 YPLENKDTVS-VARSFVNNFILRYGIPTEIITDQGTEFMSSVFTEICNLLHIKKLHSTAY 359
P T AR F I +G P EII D F S + + + + S Y
Sbjct: 1018 VPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPY 1077
Query: 360 HHETLGGLENTHKVLGAYLRIQCDNNKTDWSSWLPFWCFSFNTTVHSETKYTPFELVFGK 539
+T G E T++ + LR C + W + S+N +HS T+ TPFE+V +
Sbjct: 1078 RPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH-R 1136
Query: 540 HCNLPSNIEQNSYVD 584
+ S +E S+ D
Sbjct: 1137 YSPALSPLELPSFSD 1151
>SPCC1020.14 |Tf2-12||retrotransposable element|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1333
Score = 71.3 bits (167), Expect = 1e-13
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 1/195 (0%)
Frame = +3
Query: 3 SCQIQKHSNRHTKEPMVITSTASTAFERVSLDLMGSLDVDNFNYKYILTLQCDLTKYVEA 182
+CQI K N P+ + +E +S+D + +L ++ Y + + +K
Sbjct: 959 TCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP-ESSGYNALFVVVDRFSKMAIL 1017
Query: 183 YPLENKDTVS-VARSFVNNFILRYGIPTEIITDQGTEFMSSVFTEICNLLHIKKLHSTAY 359
P T AR F I +G P EII D F S + + + + S Y
Sbjct: 1018 VPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPY 1077
Query: 360 HHETLGGLENTHKVLGAYLRIQCDNNKTDWSSWLPFWCFSFNTTVHSETKYTPFELVFGK 539
+T G E T++ + LR C + W + S+N +HS T+ TPFE+V +
Sbjct: 1078 RPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH-R 1136
Query: 540 HCNLPSNIEQNSYVD 584
+ S +E S+ D
Sbjct: 1137 YSPALSPLELPSFSD 1151
>SPBC1289.17 |Tf2-11|SPBC8E4.11c|retrotransposable
element|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1333
Score = 71.3 bits (167), Expect = 1e-13
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 1/195 (0%)
Frame = +3
Query: 3 SCQIQKHSNRHTKEPMVITSTASTAFERVSLDLMGSLDVDNFNYKYILTLQCDLTKYVEA 182
+CQI K N P+ + +E +S+D + +L ++ Y + + +K
Sbjct: 959 TCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP-ESSGYNALFVVVDRFSKMAIL 1017
Query: 183 YPLENKDTVS-VARSFVNNFILRYGIPTEIITDQGTEFMSSVFTEICNLLHIKKLHSTAY 359
P T AR F I +G P EII D F S + + + + S Y
Sbjct: 1018 VPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPY 1077
Query: 360 HHETLGGLENTHKVLGAYLRIQCDNNKTDWSSWLPFWCFSFNTTVHSETKYTPFELVFGK 539
+T G E T++ + LR C + W + S+N +HS T+ TPFE+V +
Sbjct: 1078 RPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH-R 1136
Query: 540 HCNLPSNIEQNSYVD 584
+ S +E S+ D
Sbjct: 1137 YSPALSPLELPSFSD 1151
>SPAPB15E9.03c |Tf2-5||retrotransposable element|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 1333
Score = 71.3 bits (167), Expect = 1e-13
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 1/195 (0%)
Frame = +3
Query: 3 SCQIQKHSNRHTKEPMVITSTASTAFERVSLDLMGSLDVDNFNYKYILTLQCDLTKYVEA 182
+CQI K N P+ + +E +S+D + +L ++ Y + + +K
Sbjct: 959 TCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP-ESSGYNALFVVVDRFSKMAIL 1017
Query: 183 YPLENKDTVS-VARSFVNNFILRYGIPTEIITDQGTEFMSSVFTEICNLLHIKKLHSTAY 359
P T AR F I +G P EII D F S + + + + S Y
Sbjct: 1018 VPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPY 1077
Query: 360 HHETLGGLENTHKVLGAYLRIQCDNNKTDWSSWLPFWCFSFNTTVHSETKYTPFELVFGK 539
+T G E T++ + LR C + W + S+N +HS T+ TPFE+V +
Sbjct: 1078 RPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH-R 1136
Query: 540 HCNLPSNIEQNSYVD 584
+ S +E S+ D
Sbjct: 1137 YSPALSPLELPSFSD 1151
>SPAC167.08 |Tf2-2|SPAC1705.01c|retrotransposable
element|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1333
Score = 71.3 bits (167), Expect = 1e-13
Identities = 50/195 (25%), Positives = 82/195 (42%), Gaps = 1/195 (0%)
Frame = +3
Query: 3 SCQIQKHSNRHTKEPMVITSTASTAFERVSLDLMGSLDVDNFNYKYILTLQCDLTKYVEA 182
+CQI K N P+ + +E +S+D + +L ++ Y + + +K
Sbjct: 959 TCQINKSRNHKPYGPLQPIPPSERPWESLSMDFITALP-ESSGYNALFVVVDRFSKMAIL 1017
Query: 183 YPLENKDTVS-VARSFVNNFILRYGIPTEIITDQGTEFMSSVFTEICNLLHIKKLHSTAY 359
P T AR F I +G P EII D F S + + + + S Y
Sbjct: 1018 VPCTKSITAEQTARMFDQRVIAYFGNPKEIIADNDHIFTSQTWKDFAHKYNFVMKFSLPY 1077
Query: 360 HHETLGGLENTHKVLGAYLRIQCDNNKTDWSSWLPFWCFSFNTTVHSETKYTPFELVFGK 539
+T G E T++ + LR C + W + S+N +HS T+ TPFE+V +
Sbjct: 1078 RPQTDGQTERTNQTVEKLLRCVCSTHPNTWVDHISLVQQSYNNAIHSATQMTPFEIVH-R 1136
Query: 540 HCNLPSNIEQNSYVD 584
+ S +E S+ D
Sbjct: 1137 YSPALSPLELPSFSD 1151
>SPCC663.08c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 30.7 bits (66), Expect = 0.22
Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 3/78 (3%)
Frame = -2
Query: 259 GIPYLRIKLFTNDRATETVSLFSKG*ASTYLV---RSHCNVRIYL*LKLSTSNDPIKSKL 89
GI +K +N + T + K A+T L +SH NV I + L +S+ ++
Sbjct: 16 GIGLSLVKELSNRKGTVVFASARKPGAATKLQEWSKSHSNVHI-IKLDVSSLESANEAAQ 74
Query: 88 TLSKAVDAVDVITIGSFV 35
++K VDAVDV+ + S V
Sbjct: 75 EVTKVVDAVDVLWVNSAV 92
>SPCC663.09c |||short chain dehydrogenase |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 253
Score = 28.3 bits (60), Expect = 1.2
Identities = 21/79 (26%), Positives = 41/79 (51%), Gaps = 3/79 (3%)
Frame = -2
Query: 259 GIPYLRIKLFTNDRATETVSLFSKG*ASTYLV---RSHCNVRIYL*LKLSTSNDPIKSKL 89
GI +K ++ T + K A+T L +SH NV+ + L +++ ++
Sbjct: 16 GIGLSLVKELSSREGTTVFASARKPEAATELQEWSKSHPNVKT-VELDVTSQQSANEAAQ 74
Query: 88 TLSKAVDAVDVITIGSFVC 32
+++KAVD +DV+ + S +C
Sbjct: 75 SVAKAVDGIDVLWLNSGIC 93
>SPAC1093.06c |dhc1|SPAC30C2.01c|dynein heavy chain
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 4196
Score = 28.3 bits (60), Expect = 1.2
Identities = 23/91 (25%), Positives = 39/91 (42%), Gaps = 2/91 (2%)
Frame = +3
Query: 96 DLMGSLDVDNF-NYKYILTLQCDLTKYVEAYPLENKDTVSVARSFVNNFILRYGIPTEII 272
+L+ + +V NF + ++ +L K E PL+ SV F+NN + +
Sbjct: 2933 NLLTNSEVSNFFDQNDWAEIKKNLNKLNEFQPLKFDSEESVTEIFMNNVFQNLCVVFYVY 2992
Query: 273 TDQGTEFM-SSVFTEICNLLHIKKLHSTAYH 362
T +F +S+ + N I HS YH
Sbjct: 2993 TSADVDFQTNSLSPALLNRCTIDYYHSWDYH 3023
>SPAC3G9.14 |sak1||transcriptional repressor
Sak1|Schizosaccharomyces pombe|chr 1|||Manual
Length = 766
Score = 27.5 bits (58), Expect = 2.1
Identities = 10/18 (55%), Positives = 14/18 (77%)
Frame = +3
Query: 306 FTEICNLLHIKKLHSTAY 359
+ EICN LHIK L+S ++
Sbjct: 126 YVEICNSLHIKPLNSASF 143
>SPAC1805.14 |||sequence orphan|Schizosaccharomyces pombe|chr
1|||Manual
Length = 452
Score = 26.2 bits (55), Expect = 4.8
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +3
Query: 228 VNNFILRYGIPTEIITDQGTEFMSSVFTEICNLLHIKKLHSTAYHHETL 374
+ N +L Y + T TD+ + F + NL HST +H +T+
Sbjct: 305 IKNGLLHYNMETAE-TDESYTDLDDTFARLKNLSQRHTNHSTDHHDDTV 352
>SPAC24H6.01c ||SPAPB21F2.01|membrane bound O-acyltransferase, MBOAT
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 588
Score = 26.2 bits (55), Expect = 4.8
Identities = 15/40 (37%), Positives = 21/40 (52%)
Frame = -3
Query: 642 VLFEFCILVLKGKNQDYIRDQHMNFVLC*MVDYNVYQILI 523
VL F L LKGK Y R N+ C + D ++Y +L+
Sbjct: 539 VLVSF-FLTLKGKKFIYFRICITNYYRCNVRDSSIYNVLL 577
>SPCC663.11 |||ww domain binding protein 11 |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 278
Score = 25.4 bits (53), Expect = 8.4
Identities = 8/21 (38%), Positives = 14/21 (66%)
Frame = +3
Query: 549 LPSNIEQNSYVDPLYNPDSYP 611
+P N +++ Y DP++NP P
Sbjct: 111 IPKNPKRSIYYDPIFNPYGVP 131
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,737,704
Number of Sequences: 5004
Number of extensions: 54750
Number of successful extensions: 180
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 168
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 71
effective length of database: 2,007,194
effective search space used: 343230174
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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