Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4e02
         (728 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.     47   7e-07
CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    29   0.19 
AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein...    24   4.2  

>AF295693-1|AAL55241.1|  786|Anopheles gambiae polyprotein protein.
          Length = 786

 Score = 46.8 bits (106), Expect = 7e-07
 Identities = 41/175 (23%), Positives = 75/175 (42%), Gaps = 6/175 (3%)
 Frame = +3

Query: 45  PMVITSTASTAFERVSLDLMGSLDVDNFN-YKYILTLQCDLTKYVEAYPLENK-DTVSVA 218
           P V   T++   + +  D+ G ++       +Y +TL  D ++Y   Y L+ K +     
Sbjct: 328 PPVAGKTSTEVLDIIHSDVCGPMEETTLGGCRYYMTLIDDHSRYTFVYFLKKKSEAEDKI 387

Query: 219 RSFVNNFILRYGIPTEII-TDQGTEFMSSVFTEICNLLHIKKLHSTAYHHETLGGLENTH 395
             +V     ++G    II +DQG E+ +    + C    IK   + AY  +  G  E  +
Sbjct: 388 HEYVKLVQNQFGRKPRIIRSDQGGEYSNKALRKFCADEGIKMEFTAAYSPQQNGVAERKN 447

Query: 396 KVL---GAYLRIQCDNNKTDWSSWLPFWCFSFNTTVHSETKYTPFELVFGKHCNL 551
           + L   G  +      +K  W+  +   C+  N    +  + TPFE+ FG+  +L
Sbjct: 448 RSLTEMGRCMLRDAGMHKRFWAEAVNTACYLQNRLPSAAVERTPFEIWFGRKPDL 502


>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 28.7 bits (61), Expect = 0.19
 Identities = 18/52 (34%), Positives = 25/52 (48%)
 Frame = +3

Query: 138  YILTLQCDLTKYVEAYPLENKDTVSVARSFVNNFILRYGIPTEIITDQGTEF 293
            YI    C +TK V    + N  T S   + +  F+ R G  TE+ +D GT F
Sbjct: 1448 YISIFVCFVTKAVHIELVSNL-TSSAFLAALRRFVARRGHVTELHSDNGTNF 1498


>AJ439353-6|CAD27928.1|  695|Anopheles gambiae putative G-protein
           coupled receptor protein.
          Length = 695

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = +3

Query: 39  KEPMVITSTASTAFERVSLDLMGSLDVDNFNYKY 140
           K P   T+   ++F+ ++ D+ G   +DN  Y Y
Sbjct: 141 KSPQAHTTDDESSFDNLNNDMKGHDFIDNIMYIY 174


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 680,520
Number of Sequences: 2352
Number of extensions: 12512
Number of successful extensions: 24
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)