Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4d24
         (691 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    26   0.25 
AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory recept...    26   0.33 
AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     26   0.33 
AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esteras...    24   1.3  
AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like pr...    23   2.4  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.4  
AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esteras...    22   5.4  
AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.      22   5.4  
DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.          21   7.2  
AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain tran...    21   9.5  
AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein p...    21   9.5  
AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein p...    21   9.5  

>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
            adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 26.2 bits (55), Expect = 0.25
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = +3

Query: 573  DNDDSNDTVLN-IIINGPGHLPAQSEDSNLTSPLT 674
            +ND   D+V + +I+N P H P  +  S  T+ LT
Sbjct: 1379 ENDYGQDSVTHQLIVNAPPHAPQIALTSTTTNSLT 1413


>AM292340-1|CAL23152.1|  355|Tribolium castaneum gustatory receptor
           candidate 19 protein.
          Length = 355

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 18/74 (24%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
 Frame = -2

Query: 246 FLFVKFYVGIVYIYLMAICFNFYFVMIRFCNI**TN*FRYLRTLIHVLILLG-FNVYCVL 70
           + +  F +  V++ L+   + FY++ + FC         ++   +H+L LL  +  YC L
Sbjct: 240 YFYYAFILFTVHLLLLVCIYYFYYMHLLFC-------CAFIIFTMHLLFLLCIYYFYCAL 292

Query: 69  -FLVNFYKLNRFFV 31
             L+  Y   R F+
Sbjct: 293 IILLCIYYFCRAFI 306



 Score = 24.6 bits (51), Expect = 0.77
 Identities = 9/38 (23%), Positives = 21/38 (55%)
 Frame = -3

Query: 161 FVTFSRQINFVIYVH*FMC*YYLVLMFIVYYFLSIFIN 48
           F+ F+  + F++ ++ F C + +  M +++    IF N
Sbjct: 153 FIIFTVHLLFLLCIYHFFCAFIIFTMHLLFCCAFIFFN 190



 Score = 22.6 bits (46), Expect = 3.1
 Identities = 15/48 (31%), Positives = 24/48 (50%)
 Frame = -3

Query: 194 FVLTFISL*LDFVTFSRQINFVIYVH*FMC*YYLVLMFIVYYFLSIFI 51
           F L  + L   +  +S  I F I++  F C   L+++  +YYF   FI
Sbjct: 202 FTLHLLFLPCIYYFYSAFIIFTIHLL-FYC--VLIILLCIYYFYYAFI 246



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 12/56 (21%), Positives = 25/56 (44%)
 Frame = -3

Query: 221 VLFTFI*WPFVLTFISL*LDFVTFSRQINFVIYVH*FMC*YYLVLMFIVYYFLSIF 54
           +LF    + FV+    L   +  +   I F +++   +C Y+    FI++    +F
Sbjct: 127 LLFLLCIYYFVVPLFFLLCIYYFYCAFIIFTVHLLFLLCIYHFFCAFIIFTMHLLF 182



 Score = 21.0 bits (42), Expect = 9.5
 Identities = 8/28 (28%), Positives = 15/28 (53%)
 Frame = -3

Query: 134 FVIYVH*FMC*YYLVLMFIVYYFLSIFI 51
           FV+ +   +C YY    FI++    +F+
Sbjct: 136 FVVPLFFLLCIYYFYCAFIIFTVHLLFL 163


>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 25.8 bits (54), Expect = 0.33
 Identities = 15/51 (29%), Positives = 25/51 (49%), Gaps = 2/51 (3%)
 Frame = +3

Query: 384 GTESPGSP--NIFEEPEQSFAAAENDNHIDLPSTSRSHDHDPSEGPLDVPS 530
           G+ +  SP  N+ +    S  + E+D++I  P      D D  EG L +P+
Sbjct: 205 GSPTDHSPVLNLSKSGGGSAGSLEDDDNISDPEDDDDKDQDMDEGDLPLPA 255



 Score = 22.2 bits (45), Expect = 4.1
 Identities = 15/49 (30%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
 Frame = +3

Query: 531 DEPIQIDL-AGPLRYDNDDSND--TVLNIIINGPGHLPAQSEDSNLTSP 668
           D P+ +D  A  L   N    D   VLN+  +G G   +  +D N++ P
Sbjct: 188 DRPLPLDQKARDLSPRNGSPTDHSPVLNLSKSGGGSAGSLEDDDNISDP 236


>AJ845189-1|CAH60166.1|  515|Tribolium castaneum putative esterase
           protein.
          Length = 515

 Score = 23.8 bits (49), Expect = 1.3
 Identities = 9/12 (75%), Positives = 10/12 (83%)
 Frame = +3

Query: 387 TESPGSPNIFEE 422
           TE+PG PN FEE
Sbjct: 319 TETPGMPNDFEE 330


>AF356647-1|AAK43700.1| 1156|Tribolium castaneum teashirt-like
           protein protein.
          Length = 1156

 Score = 23.0 bits (47), Expect = 2.4
 Identities = 13/43 (30%), Positives = 20/43 (46%)
 Frame = +3

Query: 375 QSQGTESPGSPNIFEEPEQSFAAAENDNHIDLPSTSRSHDHDP 503
           +  G+ +P S      PE+  AA+     +  PS+ RS   DP
Sbjct: 32  EDTGSMTPNSAASPAPPEEE-AASPTPGDVPTPSSPRSISEDP 73


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 10/32 (31%), Positives = 14/32 (43%)
 Frame = +3

Query: 189 NKWPSNKCKQYLRKILQTKNCFRLTRNVFSLI 284
           NK   N  K Y+R++    NC  L     + I
Sbjct: 343 NKKRKNNIKLYVRRVFIMDNCEELIPEYLNFI 374


>AJ845188-1|CAH60165.1|  517|Tribolium castaneum putative esterase
           protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 390 ESPGSPNIFEE 422
           E+PG PN FEE
Sbjct: 322 ETPGMPNDFEE 332


>AJ844897-1|CAH59956.1|  517|Tribolium castaneum esterase protein.
          Length = 517

 Score = 21.8 bits (44), Expect = 5.4
 Identities = 8/11 (72%), Positives = 9/11 (81%)
 Frame = +3

Query: 390 ESPGSPNIFEE 422
           E+PG PN FEE
Sbjct: 322 ETPGMPNDFEE 332


>DQ342040-1|ABC69932.1|  822|Tribolium castaneum STIP protein.
          Length = 822

 Score = 21.4 bits (43), Expect = 7.2
 Identities = 8/19 (42%), Positives = 9/19 (47%)
 Frame = -2

Query: 561 DRPSLFVWAHRWAHLTDPR 505
           D   + VW H W  L D R
Sbjct: 537 DTIPIHVWIHPWIPLLDTR 555


>AY043293-2|AAK96034.1|  353|Tribolium castaneum homeodomain
           transcription factor Labialprotein.
          Length = 353

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 230 NFTNKKLFPLNKKRFF 277
           NFTNK+L  L K+  F
Sbjct: 259 NFTNKQLTELEKEFHF 274


>AF231104-1|AAF64149.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 230 NFTNKKLFPLNKKRFF 277
           NFTNK+L  L K+  F
Sbjct: 48  NFTNKQLTELEKEFHF 63


>AF231103-1|AAF64148.1|  142|Tribolium castaneum labial protein
           protein.
          Length = 142

 Score = 21.0 bits (42), Expect = 9.5
 Identities = 9/16 (56%), Positives = 11/16 (68%)
 Frame = +2

Query: 230 NFTNKKLFPLNKKRFF 277
           NFTNK+L  L K+  F
Sbjct: 48  NFTNKQLTELEKEFHF 63


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 159,613
Number of Sequences: 336
Number of extensions: 3694
Number of successful extensions: 18
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 18114270
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)