BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4d21
(416 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z22930-3|CAA80515.1| 275|Anopheles gambiae trypsin protein. 24 2.5
AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide recepto... 23 3.4
AY146739-1|AAO12099.1| 176|Anopheles gambiae odorant-binding pr... 23 5.9
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein. 22 7.8
>Z22930-3|CAA80515.1| 275|Anopheles gambiae trypsin protein.
Length = 275
Score = 23.8 bits (49), Expect = 2.5
Identities = 9/40 (22%), Positives = 21/40 (52%)
Frame = -1
Query: 242 WLHRTYYTVDNKRPETFLLIIINTIHLNSSTLIHGNRALQ 123
W+ + D +PE+ + + ++ H + ++IH R +Q
Sbjct: 83 WILTAAHCTDGSQPESLTVRLGSSRHASGGSVIHVARIVQ 122
>AY299455-1|AAQ73620.1| 493|Anopheles gambiae FMRF amide receptor
protein.
Length = 493
Score = 23.4 bits (48), Expect = 3.4
Identities = 15/65 (23%), Positives = 32/65 (49%)
Frame = -2
Query: 400 NVFHLLRIQRANKKSGKTSRSRQKADFSFSIIGCLGYVVFSCSSGQNKTKT*VGCIALII 221
N+ +++RANK+ + SRS ++ +++ C+ V C+ +LII
Sbjct: 282 NLMIYRQVRRANKERQRLSRSEKREIGLATMLICVVIVFLLCNLPAMMINIVEAFYSLII 341
Query: 220 Q*IIK 206
+ ++K
Sbjct: 342 EYMVK 346
>AY146739-1|AAO12099.1| 176|Anopheles gambiae odorant-binding
protein AgamOBP29 protein.
Length = 176
Score = 22.6 bits (46), Expect = 5.9
Identities = 10/33 (30%), Positives = 16/33 (48%)
Frame = -2
Query: 394 FHLLRIQRANKKSGKTSRSRQKADFSFSIIGCL 296
F++ IQ G +R + K D+S + CL
Sbjct: 125 FYVDSIQECFHMLGLDNRLKDKCDYSMRFVTCL 157
>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
Length = 1376
Score = 22.2 bits (45), Expect = 7.8
Identities = 7/9 (77%), Positives = 9/9 (100%)
Frame = -1
Query: 230 TYYTVDNKR 204
+YYT+DNKR
Sbjct: 183 SYYTIDNKR 191
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 391,078
Number of Sequences: 2352
Number of extensions: 6923
Number of successful extensions: 7
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 563,979
effective HSP length: 58
effective length of database: 427,563
effective search space used: 34205040
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -