BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4d21
(416 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U31985-1|AAA97401.1| 626|Drosophila melanogaster Dally protein. 29 3.3
BT011348-1|AAR96140.1| 626|Drosophila melanogaster RH21780p pro... 29 3.3
AE014296-1531|AAF50358.1| 626|Drosophila melanogaster CG4974-PA... 29 3.3
BT016103-1|AAV36988.1| 747|Drosophila melanogaster LD20955p pro... 27 7.6
AY051939-1|AAK93363.1| 720|Drosophila melanogaster LD41868p pro... 27 7.6
AE013599-3718|AAF47090.3| 747|Drosophila melanogaster CG5602-PA... 27 7.6
>U31985-1|AAA97401.1| 626|Drosophila melanogaster Dally protein.
Length = 626
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 44 NYTDLNVRDRMAKFFEQMRFNYTASVLVMLD 136
N T+L +RD+ A FEQ+ ++T+S+ +L+
Sbjct: 101 NATELELRDKAAGMFEQLLHHHTSSLRGVLE 131
>BT011348-1|AAR96140.1| 626|Drosophila melanogaster RH21780p
protein.
Length = 626
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 44 NYTDLNVRDRMAKFFEQMRFNYTASVLVMLD 136
N T+L +RD+ A FEQ+ ++T+S+ +L+
Sbjct: 101 NATELELRDKAAGMFEQLLHHHTSSLRGVLE 131
>AE014296-1531|AAF50358.1| 626|Drosophila melanogaster CG4974-PA
protein.
Length = 626
Score = 28.7 bits (61), Expect = 3.3
Identities = 12/31 (38%), Positives = 22/31 (70%)
Frame = +2
Query: 44 NYTDLNVRDRMAKFFEQMRFNYTASVLVMLD 136
N T+L +RD+ A FEQ+ ++T+S+ +L+
Sbjct: 101 NATELELRDKAAGMFEQLLHHHTSSLRGVLE 131
>BT016103-1|AAV36988.1| 747|Drosophila melanogaster LD20955p
protein.
Length = 747
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 273 EQLKTT*PKQPIIEKLKSAFWREREVLPLFLLAR 374
E ++ P LK+A+W++++V P LAR
Sbjct: 99 EDVENYDPSADSYHPLKNAYWKDKKVTPYLALAR 132
>AY051939-1|AAK93363.1| 720|Drosophila melanogaster LD41868p
protein.
Length = 720
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 273 EQLKTT*PKQPIIEKLKSAFWREREVLPLFLLAR 374
E ++ P LK+A+W++++V P LAR
Sbjct: 99 EDVENYDPSADSYHPLKNAYWKDKKVTPYLALAR 132
>AE013599-3718|AAF47090.3| 747|Drosophila melanogaster CG5602-PA
protein.
Length = 747
Score = 27.5 bits (58), Expect = 7.6
Identities = 11/34 (32%), Positives = 19/34 (55%)
Frame = +3
Query: 273 EQLKTT*PKQPIIEKLKSAFWREREVLPLFLLAR 374
E ++ P LK+A+W++++V P LAR
Sbjct: 99 EDVENYDPSADSYHPLKNAYWKDKKVTPYLALAR 132
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,029,042
Number of Sequences: 53049
Number of extensions: 279590
Number of successful extensions: 468
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 465
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 468
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1251032760
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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