Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4d21
         (416 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L39927-1|AAA98784.1|  344|Caenorhabditis elegans cathepsin B-lik...    28   3.1  
L39896-1|AAA98786.1|  344|Caenorhabditis elegans cathepsin B-lik...    28   3.1  
AF016426-3|AAB65346.1|  344|Caenorhabditis elegans Cysteine prot...    28   3.1  
Z69662-7|CAA93497.2| 1132|Caenorhabditis elegans Hypothetical pr...    26   9.5  

>L39927-1|AAA98784.1|  344|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 344

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = -1

Query: 158 SSTLIHGNR---ALQGQTLYN*IASVQKTWPFGH 66
           S+ +I G+R   AL GQ L + + S QK W  GH
Sbjct: 14  SAVVIPGHREAPALTGQALIDYVNSAQKLWTAGH 47


>L39896-1|AAA98786.1|  344|Caenorhabditis elegans cathepsin B-like
           cysteine proteinaseprotein.
          Length = 344

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = -1

Query: 158 SSTLIHGNR---ALQGQTLYN*IASVQKTWPFGH 66
           S+ +I G+R   AL GQ L + + S QK W  GH
Sbjct: 14  SAVVIPGHREAPALTGQALIDYVNSAQKLWTAGH 47


>AF016426-3|AAB65346.1|  344|Caenorhabditis elegans Cysteine
           protease related protein 5 protein.
          Length = 344

 Score = 27.9 bits (59), Expect = 3.1
 Identities = 15/34 (44%), Positives = 20/34 (58%), Gaps = 3/34 (8%)
 Frame = -1

Query: 158 SSTLIHGNR---ALQGQTLYN*IASVQKTWPFGH 66
           S+ +I G+R   AL GQ L + + S QK W  GH
Sbjct: 14  SAVVIPGHREAPALTGQALIDYVNSAQKLWTAGH 47


>Z69662-7|CAA93497.2| 1132|Caenorhabditis elegans Hypothetical
           protein F56D5.9 protein.
          Length = 1132

 Score = 26.2 bits (55), Expect = 9.5
 Identities = 12/23 (52%), Positives = 12/23 (52%)
 Frame = +2

Query: 197 FQVFYYLLYNKCDATNLSFCFIL 265
           F    Y L N  D T LSFCF L
Sbjct: 134 FDDIEYCLSNDIDRTKLSFCFAL 156


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,675,503
Number of Sequences: 27780
Number of extensions: 157167
Number of successful extensions: 333
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 325
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 333
length of database: 12,740,198
effective HSP length: 74
effective length of database: 10,684,478
effective search space used: 683806592
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)