Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4d18
         (729 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakini...    24   4.2  
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ...    24   4.2  

>AY347952-1|AAR28375.1|  634|Anopheles gambiae putative sulfakinin
           GPCR protein.
          Length = 634

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 9/26 (34%), Positives = 14/26 (53%)
 Frame = -1

Query: 396 RAYQEGS*MCRDYPFYQLTTTVTGVW 319
           R +  GS MC+  P++Q  +    VW
Sbjct: 172 RRFVFGSVMCKLIPYFQAVSVSVAVW 197


>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
            chain protein.
          Length = 1024

 Score = 24.2 bits (50), Expect = 4.2
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)
 Frame = +1

Query: 592  PSVPLYENKCMPTLGERRPLSVETNVGPVRPRSL--PACP 705
            P +P+ EN+  P +         TNV  V  ++L  P CP
Sbjct: 887  PMMPVTENEMRPYISRCTVCEAPTNVIAVHSQTLHIPECP 926



 Score = 23.0 bits (47), Expect = 9.7
 Identities = 13/29 (44%), Positives = 13/29 (44%)
 Frame = +3

Query: 636 GEAAAVGRDECGASAATQPPRMPGPVHAR 722
           GE    GR   GA     PP  PGPV  R
Sbjct: 30  GEMGEQGRT--GAQGNAGPPGAPGPVGPR 56


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 713,124
Number of Sequences: 2352
Number of extensions: 15287
Number of successful extensions: 24
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 74428737
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)