Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4d15
(637 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical p... 37 0.011
Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical pr... 37 0.011
Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue... 37 0.011
U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical pr... 36 0.024
Z92817-3|CAJ43914.1| 511|Caenorhabditis elegans Hypothetical pr... 35 0.042
Z92817-2|CAJ43913.1| 510|Caenorhabditis elegans Hypothetical pr... 35 0.042
Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical pr... 32 0.40
Z81560-6|CAB04544.1| 164|Caenorhabditis elegans Hypothetical pr... 31 0.69
AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical... 30 1.6
Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical pr... 29 2.1
U56966-6|ABS19472.1| 1558|Caenorhabditis elegans Vitellogenin st... 29 2.1
U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical pr... 29 2.1
U88178-6|ABA03112.1| 312|Caenorhabditis elegans Hypothetical pr... 29 2.8
U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase prote... 29 2.8
Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical pr... 29 3.7
Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical p... 29 3.7
AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein. 29 3.7
AF000194-4|AAK39378.2| 390|Caenorhabditis elegans Suspended ani... 29 3.7
Z99273-1|CAB16477.1| 645|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z82256-4|CAB05118.1| 636|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical pr... 28 4.9
Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical pr... 28 4.9
X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy ch... 28 4.9
DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein. 28 4.9
AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha ... 28 4.9
Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical p... 28 6.4
Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical p... 28 6.4
U58746-10|AAY86270.1| 77|Caenorhabditis elegans Hypothetical p... 28 6.4
AF100670-2|AAN73857.3| 554|Caenorhabditis elegans Hypothetical ... 28 6.4
U97593-6|AAB52879.2| 925|Caenorhabditis elegans Prion-like-(q/n... 27 8.5
AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical ... 27 8.5
>Z78200-10|CAN86608.1| 1312|Caenorhabditis elegans Hypothetical
protein T04H1.4b protein.
Length = 1312
Score = 37.1 bits (82), Expect = 0.011
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 4/132 (3%)
Frame = +2
Query: 179 YGLQVTADTRRADAFDLRHSAH-QLRNETRIKTEWDSYHNNNRLSAR-VYEIEQWKSTLQ 352
Y L+ + R++ DL H A + + I + + R+ A+ E++ T Q
Sbjct: 376 YDLERLENQLRSE-LDLEHDADIDIEIDNAITLKIRGMSDKARMIAKNCAELQSNLRTAQ 434
Query: 353 ELLDRIDREMGSLKEEKASTERELEQLNLPLLVCSECLSNRDG--RRSSELTYDLADTEL 526
E +I+ EM +L+ EK E+E+EQL + + ++ L LAD L
Sbjct: 435 EAATKIEVEMKTLQNEKVKLEKEVEQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPL 494
Query: 527 KKELCVTESNKK 562
E +TE K
Sbjct: 495 LDENALTECKLK 506
>Z78200-9|CAB01581.1| 1298|Caenorhabditis elegans Hypothetical
protein T04H1.4a protein.
Length = 1298
Score = 37.1 bits (82), Expect = 0.011
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 4/132 (3%)
Frame = +2
Query: 179 YGLQVTADTRRADAFDLRHSAH-QLRNETRIKTEWDSYHNNNRLSAR-VYEIEQWKSTLQ 352
Y L+ + R++ DL H A + + I + + R+ A+ E++ T Q
Sbjct: 362 YDLERLENQLRSE-LDLEHDADIDIEIDNAITLKIRGMSDKARMIAKNCAELQSNLRTAQ 420
Query: 353 ELLDRIDREMGSLKEEKASTERELEQLNLPLLVCSECLSNRDG--RRSSELTYDLADTEL 526
E +I+ EM +L+ EK E+E+EQL + + ++ L LAD L
Sbjct: 421 EAATKIEVEMKTLQNEKVKLEKEVEQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPL 480
Query: 527 KKELCVTESNKK 562
E +TE K
Sbjct: 481 LDENALTECKLK 492
>Z75312-1|CAA99730.1| 1298|Caenorhabditis elegans RAD50 homologue
ceRAD50 protein.
Length = 1298
Score = 37.1 bits (82), Expect = 0.011
Identities = 34/132 (25%), Positives = 57/132 (43%), Gaps = 4/132 (3%)
Frame = +2
Query: 179 YGLQVTADTRRADAFDLRHSAH-QLRNETRIKTEWDSYHNNNRLSAR-VYEIEQWKSTLQ 352
Y L+ + R++ DL H A + + I + + R+ A+ E++ T Q
Sbjct: 362 YDLERLENQLRSE-LDLEHDADIDIEIDNAITLKIRGMSDKARMIAKNCAELQSNLRTAQ 420
Query: 353 ELLDRIDREMGSLKEEKASTERELEQLNLPLLVCSECLSNRDG--RRSSELTYDLADTEL 526
E +I+ EM +L+ EK E+E+EQL + + ++ L LAD L
Sbjct: 421 EAATKIEVEMKTLQNEKVKLEKEVEQLKFKIKQGQNATAGMKDLLKKEEALRKSLADLPL 480
Query: 527 KKELCVTESNKK 562
E +TE K
Sbjct: 481 LDENALTECKLK 492
>U53337-2|AAA96184.1| 639|Caenorhabditis elegans Hypothetical
protein R02E12.4 protein.
Length = 639
Score = 35.9 bits (79), Expect = 0.024
Identities = 38/136 (27%), Positives = 55/136 (40%)
Frame = +2
Query: 227 LRHSAHQLRNETRIKTEWDSYHNNNRLSARVYEIEQWKSTLQELLDRIDREMGSLKEEKA 406
+R AHQLR E I E L V ++WK L ++ D+E+ +
Sbjct: 470 IREMAHQLRTEA-IAVE-------ALLKDSVRNWQEWKDNLHSQVNGKDKEIKNADGAIE 521
Query: 407 STERELEQLNLPLLVCSECLSNRDGRRSSELTYDLADTELKKELCVTESNKKMLIDRCQS 586
L Q + PL V + R R EL D A L +EL + + L ++
Sbjct: 522 EISFSLRQKSGPLQVALSRQNQRGLRPGIELCNDKAQHALHQELMMLKGTFLSLENQLDK 581
Query: 587 AWEKINKLEVVKFKLQ 634
A E KL+ + KLQ
Sbjct: 582 AKESRKKLDNDRDKLQ 597
Score = 29.1 bits (62), Expect = 2.8
Identities = 34/130 (26%), Positives = 55/130 (42%), Gaps = 9/130 (6%)
Frame = +2
Query: 203 TRRADAFDLRHSAHQLRNETRIKTEWDSYHNNNRLSARVYEIEQWKSTLQELLDRIDREM 382
T D ++ A E ++ +L RV +++ W IDRE+
Sbjct: 244 TEYDDPIEIVRMARLAVKEANMRAARMQGQTTQQLMQRVKDLKYWSG-------EIDREL 296
Query: 383 GSLKEEKASTERELEQLNLPLLV------CSE-CLSNRDGR-RSSELTYDLADTELKKEL 538
+KEE R +L L L + C+E CL+ R + + + T D D EL KE
Sbjct: 297 ADVKEEHDDLLRCYRRLQLCLDITGRSSRCNESCLAVRRKKVQVGDHTSDRVDMELHKEK 356
Query: 539 -CVTESNKKM 565
+T++ K+M
Sbjct: 357 ELMTDTMKQM 366
>Z92817-3|CAJ43914.1| 511|Caenorhabditis elegans Hypothetical
protein W08G11.3b protein.
Length = 511
Score = 35.1 bits (77), Expect = 0.042
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 257 ETRIKTEWDSYHNNNRLSARVYEIEQWKSTLQELLDRIDREMGSLKEEKASTERE 421
E R+K E + HN + IE K+T ++ L R++ E+ LK EK E++
Sbjct: 301 ELRLKQEKPAVHNEMTVETIYIAIETIKTTYEKQLSRMEEEIEHLKAEKLKQEQQ 355
>Z92817-2|CAJ43913.1| 510|Caenorhabditis elegans Hypothetical
protein W08G11.3a protein.
Length = 510
Score = 35.1 bits (77), Expect = 0.042
Identities = 18/55 (32%), Positives = 29/55 (52%)
Frame = +2
Query: 257 ETRIKTEWDSYHNNNRLSARVYEIEQWKSTLQELLDRIDREMGSLKEEKASTERE 421
E R+K E + HN + IE K+T ++ L R++ E+ LK EK E++
Sbjct: 300 ELRLKQEKPAVHNEMTVETIYIAIETIKTTYEKQLSRMEEEIEHLKAEKLKQEQQ 354
>Z54238-7|CAJ90498.1| 1861|Caenorhabditis elegans Hypothetical protein
T28C6.9 protein.
Length = 1861
Score = 31.9 bits (69), Expect = 0.40
Identities = 18/78 (23%), Positives = 40/78 (51%), Gaps = 1/78 (1%)
Frame = +2
Query: 197 ADTRRADAFDL-RHSAHQLRNETRIKTEWDSYHNNNRLSARVYEIEQWKSTLQELLDRID 373
A RAD + + + Q ++ +T + H N RL V E ++WK+ ++E ++++
Sbjct: 952 AVAERADETEAAKLTTRQADVDSLFRTNAELAHTNVRLQNEVDEQDEWKAKIEEEKEQLE 1011
Query: 374 REMGSLKEEKASTERELE 427
+ + L+++ A + E
Sbjct: 1012 QHVKELEDQVAELMEQHE 1029
>Z81560-6|CAB04544.1| 164|Caenorhabditis elegans Hypothetical
protein K02E2.7 protein.
Length = 164
Score = 31.1 bits (67), Expect = 0.69
Identities = 18/70 (25%), Positives = 37/70 (52%)
Frame = +2
Query: 227 LRHSAHQLRNETRIKTEWDSYHNNNRLSARVYEIEQWKSTLQELLDRIDREMGSLKEEKA 406
+ +S+HQL N + + ++ + S E + + + LQE R EM + +++A
Sbjct: 86 INNSSHQLENALKAEENIETEISEEEASDDEEE-DNFHTMLQEQAARHKEEMEKVMKKRA 144
Query: 407 STERELEQLN 436
+++LE+LN
Sbjct: 145 EQKKKLEELN 154
>AL132904-10|CAC35843.2| 1481|Caenorhabditis elegans Hypothetical
protein Y111B2A.14 protein.
Length = 1481
Score = 29.9 bits (64), Expect = 1.6
Identities = 19/69 (27%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Frame = +2
Query: 230 RHSAHQLRN-ETRIKTEWDSYHNNNRLSARVYEIEQWKSTLQELLDRIDREMGSLKEEKA 406
+ A +L+ E ++K E + +R+ A+ +E E+ K QE + +R+ +EEK
Sbjct: 963 KEEAERLKKLEEKLKKEKEKQAEKDRIEAKKFE-ERMKKE-QEKQEEKERKEREKREEKE 1020
Query: 407 STERELEQL 433
ERE+ ++
Sbjct: 1021 RKEREIREI 1029
>Z81055-4|CAB02893.1| 824|Caenorhabditis elegans Hypothetical
protein F01G10.5 protein.
Length = 824
Score = 29.5 bits (63), Expect = 2.1
Identities = 15/52 (28%), Positives = 30/52 (57%)
Frame = +2
Query: 245 QLRNETRIKTEWDSYHNNNRLSARVYEIEQWKSTLQELLDRIDREMGSLKEE 400
++RN+T ++ + + N+LS + EIE K LQ+L+ + + E+ E+
Sbjct: 551 EIRNQTSVQYKERTSALENQLSQKDAEIENLKRDLQQLVTKHESELKEQHEQ 602
>U56966-6|ABS19472.1| 1558|Caenorhabditis elegans Vitellogenin
structural genes (yolk protein genes) protein 2, isoform
b protein.
Length = 1558
Score = 29.5 bits (63), Expect = 2.1
Identities = 33/115 (28%), Positives = 52/115 (45%), Gaps = 2/115 (1%)
Frame = +2
Query: 245 QLRNET-RIKTEWDSYHNNNRLSARVYEIEQWKSTLQELLDRIDREMGSLKEEKASTERE 421
QL+NE R+K + + + SA Y+IE+ L E I+ G ++ + + + +
Sbjct: 1374 QLQNEEIRVKVDGKKIQSED-YSA--YQIER----LGESAIVIELPEGEVRFDGYTIKTQ 1426
Query: 422 LEQLNLPLLVCSECLSNRDGRRSSELTYDLADTELKKELCVTESNKKM-LIDRCQ 583
L + +C C N D SSE TYD KK S KK L+++ Q
Sbjct: 1427 LPSYSRKNQLCGLC-GNNDDEYSSEETYDYEQENTKKSQKNQRSQKKSDLVEKTQ 1480
>U55364-6|AAA97973.1| 2541|Caenorhabditis elegans Hypothetical
protein F21C10.7 protein.
Length = 2541
Score = 29.5 bits (63), Expect = 2.1
Identities = 12/52 (23%), Positives = 26/52 (50%), Gaps = 1/52 (1%)
Frame = +2
Query: 272 TEWDSYHN-NNRLSARVYEIEQWKSTLQELLDRIDREMGSLKEEKASTEREL 424
TEW N ++ + EI+ W++ + E + ++D + KEE ++ +
Sbjct: 583 TEWQRDKNVQTKVETVIEEIQMWQTDVLEFIGKVDNSTVTKKEEVEEIQKRI 634
>U88178-6|ABA03112.1| 312|Caenorhabditis elegans Hypothetical
protein W09C3.8 protein.
Length = 312
Score = 29.1 bits (62), Expect = 2.8
Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 4/46 (8%)
Frame = +2
Query: 230 RHSAHQLRNE----TRIKTEWDSYHNNNRLSARVYEIEQWKSTLQE 355
R + H LR + T+I TEWD HN N A + ++W + E
Sbjct: 215 RFAGHILRRDPNRWTKICTEWDPSHNKNWKRAVGGQKKRWAKDIDE 260
>U42835-2|AAA83586.1| 617|Caenorhabditis elegans Chitinase protein
1 protein.
Length = 617
Score = 29.1 bits (62), Expect = 2.8
Identities = 13/32 (40%), Positives = 16/32 (50%)
Frame = -3
Query: 404 PSLLSNFPFRGQCGQAILGAWTSIVQFRKPLH 309
P+L NF F GAW S+V F PL+
Sbjct: 233 PNLAPNFDFILLMSYDFFGAWASLVGFNSPLY 264
>Z81555-7|CAB04518.1| 561|Caenorhabditis elegans Hypothetical
protein F58E10.3a protein.
Length = 561
Score = 28.7 bits (61), Expect = 3.7
Identities = 15/31 (48%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Frame = +2
Query: 275 EWDSYHNNNRLSARV-YEIEQWKSTLQELLD 364
E D YH N +S R YEI+QW S Q L+
Sbjct: 91 EKDFYHENAAVSRREQYEIDQWVSANQVTLE 121
>Z78543-6|CAB01756.1| 2962|Caenorhabditis elegans Hypothetical protein
C35C5.1 protein.
Length = 2962
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 305 LSARVYEIEQWKSTLQELLD-RIDREMGSLKEEKASTERELEQLNLPLLVCSECLSNRDG 481
+S RV E E+ K L+ L +RE LK E+ + LEQL + +E +
Sbjct: 1185 ISRRVREEEEEKMRLERLRKAEREREQERLKREEEEERKRLEQLREAEKLKAEIEKENER 1244
Query: 482 RRSSELTYDLADTELKKE 535
+ E T + E K E
Sbjct: 1245 KLQEERTRKALELERKIE 1262
>Z78417-13|CAB01693.1| 2962|Caenorhabditis elegans Hypothetical
protein C35C5.1 protein.
Length = 2962
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 305 LSARVYEIEQWKSTLQELLD-RIDREMGSLKEEKASTERELEQLNLPLLVCSECLSNRDG 481
+S RV E E+ K L+ L +RE LK E+ + LEQL + +E +
Sbjct: 1185 ISRRVREEEEEKMRLERLRKAEREREQERLKREEEEERKRLEQLREAEKLKAEIEKENER 1244
Query: 482 RRSSELTYDLADTELKKE 535
+ E T + E K E
Sbjct: 1245 KLQEERTRKALELERKIE 1262
>AF111934-1|AAD18003.1| 2962|Caenorhabditis elegans SDC-2 protein.
Length = 2962
Score = 28.7 bits (61), Expect = 3.7
Identities = 23/78 (29%), Positives = 34/78 (43%), Gaps = 1/78 (1%)
Frame = +2
Query: 305 LSARVYEIEQWKSTLQELLD-RIDREMGSLKEEKASTERELEQLNLPLLVCSECLSNRDG 481
+S RV E E+ K L+ L +RE LK E+ + LEQL + +E +
Sbjct: 1185 ISRRVREEEEEKMRLERLRKAEREREQERLKREEEEERKRLEQLREAEKLKAEIEKENER 1244
Query: 482 RRSSELTYDLADTELKKE 535
+ E T + E K E
Sbjct: 1245 KLQEERTRKALELERKIE 1262
>AF000194-4|AAK39378.2| 390|Caenorhabditis elegans Suspended
animation (anoxia-induced)defective protein 1 protein.
Length = 390
Score = 28.7 bits (61), Expect = 3.7
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 4/73 (5%)
Frame = +2
Query: 251 RNETRIKTEWDSYHNNNRLSARVYEIEQWKSTLQELL--DRIDREMGSLKEEKASTE--R 418
RN + +WD Y N R + R +I+ K ++E++ + ++ L EE + E
Sbjct: 13 RNNDDAEDDWDRYSENVRPTRRGRKIDALKRNVEEVVTEETARLKLDQLLEELQNLECSE 72
Query: 419 ELEQLNLPLLVCS 457
E E+L L CS
Sbjct: 73 ESEELQKILDFCS 85
>Z99273-1|CAB16477.1| 645|Caenorhabditis elegans Hypothetical
protein Y45F10C.1 protein.
Length = 645
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 236 SAHQLRNETRIKTEWDSYHNNNRLSARVYEIEQWKSTLQELLDRIDREMGSLKEEKAS-T 412
SA +L + + D+ +NN A V E K ++ +LD++D + SL+ E +
Sbjct: 479 SAPKLEIVDESEVQCDAVNNNKAQEADVEGSEYPKISMLNVLDKLDNMLISLESELLNEL 538
Query: 413 ERELEQLNL 439
E+EQL +
Sbjct: 539 LNEIEQLRV 547
>Z92822-8|CAL49447.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -3
Query: 233 ASSQKRLLVLYRQSPANRTVVHPNQAGSDVEAVSQTSQRIAL 108
A+S K L SP+ T+V N AG+ V +TS+RIA+
Sbjct: 116 ATSSKELPTCLAWSPSTPTLVIGNNAGNIVVYNHRTSRRIAV 157
>Z82256-4|CAB05118.1| 636|Caenorhabditis elegans Hypothetical
protein B0513.6 protein.
Length = 636
Score = 28.3 bits (60), Expect = 4.9
Identities = 20/69 (28%), Positives = 35/69 (50%), Gaps = 1/69 (1%)
Frame = +2
Query: 236 SAHQLRNETRIKTEWDSYHNNNRLSARVYEIEQWKSTLQELLDRIDREMGSLKEEKAS-T 412
SA +L + + D+ +NN A V E K ++ +LD++D + SL+ E +
Sbjct: 470 SAPKLEIVDESEVQCDAVNNNKAQEADVEGSEYPKISMLNVLDKLDNMLISLESELLNEL 529
Query: 413 ERELEQLNL 439
E+EQL +
Sbjct: 530 LNEIEQLRV 538
>Z82094-4|CAL49445.1| 1383|Caenorhabditis elegans Hypothetical
protein ZK520.3a protein.
Length = 1383
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -3
Query: 233 ASSQKRLLVLYRQSPANRTVVHPNQAGSDVEAVSQTSQRIAL 108
A+S K L SP+ T+V N AG+ V +TS+RIA+
Sbjct: 116 ATSSKELPTCLAWSPSTPTLVIGNNAGNIVVYNHRTSRRIAV 157
>Z78199-1|CAB01576.2| 1969|Caenorhabditis elegans Hypothetical protein
K12F2.1 protein.
Length = 1969
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 230 RHSAHQLRNETRIKTEWDSYHNN-NRLSARVYEIEQWKSTLQELLDRIDREMGSLKEEKA 406
+ HQ + ++ + S + N L ++EQ L+E +DR R G +++ K
Sbjct: 1007 KEKKHQEESNRKLNEDLQSEEDKVNHLEKIRNKLEQQMDELEENIDREKRSRGDIEKAKR 1066
Query: 407 STERELE 427
E +L+
Sbjct: 1067 KVEGDLK 1073
>Z50794-5|CAA90660.1| 1139|Caenorhabditis elegans Hypothetical
protein F59F5.6 protein.
Length = 1139
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 341 STLQELLDRIDREMGSLKEEKASTERELEQL 433
S LQ+ LD I+ E+ +++EK ER EQL
Sbjct: 662 SMLQDRLDAINTEIRLIQQEKHHAERVAEQL 692
>X08067-1|CAA30856.1| 1969|Caenorhabditis elegans myosin heavy chain 3
protein.
Length = 1969
Score = 28.3 bits (60), Expect = 4.9
Identities = 16/67 (23%), Positives = 31/67 (46%), Gaps = 1/67 (1%)
Frame = +2
Query: 230 RHSAHQLRNETRIKTEWDSYHNN-NRLSARVYEIEQWKSTLQELLDRIDREMGSLKEEKA 406
+ HQ + ++ + S + N L ++EQ L+E +DR R G +++ K
Sbjct: 1007 KEKKHQEESNRKLNEDLQSEEDKVNHLEKIRNKLEQQMDELEENIDREKRSRGDIEKAKR 1066
Query: 407 STERELE 427
E +L+
Sbjct: 1067 KVEGDLK 1073
>DQ314286-1|ABC42046.1| 1383|Caenorhabditis elegans DYF-2 protein.
Length = 1383
Score = 28.3 bits (60), Expect = 4.9
Identities = 17/42 (40%), Positives = 24/42 (57%)
Frame = -3
Query: 233 ASSQKRLLVLYRQSPANRTVVHPNQAGSDVEAVSQTSQRIAL 108
A+S K L SP+ T+V N AG+ V +TS+RIA+
Sbjct: 116 ATSSKELPTCLAWSPSTPTLVIGNNAGNIVVYNHRTSRRIAV 157
>AF170122-1|AAD47840.1| 1139|Caenorhabditis elegans liprin-alpha
homolog SYD-2 protein.
Length = 1139
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/31 (45%), Positives = 20/31 (64%)
Frame = +2
Query: 341 STLQELLDRIDREMGSLKEEKASTERELEQL 433
S LQ+ LD I+ E+ +++EK ER EQL
Sbjct: 662 SMLQDRLDAINTEIRLIQQEKHHAERVAEQL 692
>Z81466-6|CAB03870.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +2
Query: 332 QWKSTLQELLDRIDREMGSLKEEKASTERELEQLNLPLLVCSECLSNRDGRRSSELTYDL 511
+W T + R+ ++ + E+K+ E ++LN+ L E L+N D +E ++
Sbjct: 227 EWNKTAAFFMQRLGQQYANKPEKKSKKSTEKKELNIENL---EDLNNEDEDSENEKEEEI 283
Query: 512 ADTE 523
+ E
Sbjct: 284 EENE 287
>Z75536-5|CAA99833.1| 545|Caenorhabditis elegans Hypothetical
protein F18C12.3 protein.
Length = 545
Score = 27.9 bits (59), Expect = 6.4
Identities = 15/64 (23%), Positives = 31/64 (48%)
Frame = +2
Query: 332 QWKSTLQELLDRIDREMGSLKEEKASTERELEQLNLPLLVCSECLSNRDGRRSSELTYDL 511
+W T + R+ ++ + E+K+ E ++LN+ L E L+N D +E ++
Sbjct: 227 EWNKTAAFFMQRLGQQYANKPEKKSKKSTEKKELNIENL---EDLNNEDEDSENEKEEEI 283
Query: 512 ADTE 523
+ E
Sbjct: 284 EENE 287
>Z75536-2|CAA99830.2| 4171|Caenorhabditis elegans Hypothetical protein
F18C12.1 protein.
Length = 4171
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/43 (32%), Positives = 23/43 (53%)
Frame = +2
Query: 296 NNRLSARVYEIEQWKSTLQELLDRIDREMGSLKEEKASTEREL 424
N R+ + +I++ +Q L+D R +GS+K E S R L
Sbjct: 2859 NVRIEEQKAKIDEQLKEVQPLIDEARRAVGSIKSESLSEIRSL 2901
>Z68161-11|CAA92300.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 27.9 bits (59), Expect = 6.4
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Frame = +2
Query: 350 QELLDRIDREMGSLKEEKASTERELEQL-NL---PLLVCSECLSNRDGRRSSELTYDLAD 517
+ELL + E+ KEE ++ E++ N+ + ++ +SN + ++ A
Sbjct: 82 EELLKKQSEEIERCKEESRMLIQQKEEMENIHSEEIFGKNKTISNLRKQIDGDVERKKAK 141
Query: 518 TE-LKKELCVTESNKKMLIDRCQSAWEKINKLE 613
L+KELC + N + R + A ++I KLE
Sbjct: 142 IRTLRKELCSADMNTGKMCRRAKRAEDRIAKLE 174
>Z68159-12|CAA92289.1| 347|Caenorhabditis elegans Hypothetical
protein F20C5.6 protein.
Length = 347
Score = 27.9 bits (59), Expect = 6.4
Identities = 24/93 (25%), Positives = 45/93 (48%), Gaps = 5/93 (5%)
Frame = +2
Query: 350 QELLDRIDREMGSLKEEKASTERELEQL-NL---PLLVCSECLSNRDGRRSSELTYDLAD 517
+ELL + E+ KEE ++ E++ N+ + ++ +SN + ++ A
Sbjct: 82 EELLKKQSEEIERCKEESRMLIQQKEEMENIHSEEIFGKNKTISNLRKQIDGDVERKKAK 141
Query: 518 TE-LKKELCVTESNKKMLIDRCQSAWEKINKLE 613
L+KELC + N + R + A ++I KLE
Sbjct: 142 IRTLRKELCSADMNTGKMCRRAKRAEDRIAKLE 174
>U58746-10|AAY86270.1| 77|Caenorhabditis elegans Hypothetical
protein R05G6.12 protein.
Length = 77
Score = 27.9 bits (59), Expect = 6.4
Identities = 14/33 (42%), Positives = 17/33 (51%)
Frame = +3
Query: 240 PISSEMRRGSRPNGTATTTITD*VQGFTKLNNG 338
P+ + R S PNG T T V G T+ NNG
Sbjct: 23 PMRRKRARSSNPNGCKTKPTTLEVDGATENNNG 55
>AF100670-2|AAN73857.3| 554|Caenorhabditis elegans Hypothetical
protein M4.1 protein.
Length = 554
Score = 27.9 bits (59), Expect = 6.4
Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 3/63 (4%)
Frame = +2
Query: 254 NETRIKTEWDSYHNNNRLSARVYEIEQWKSTLQELLDRIDR---EMGSLKEEKASTEREL 424
NE +T W + N +RL AR+ +E S L + D+ E+ + +EK E +
Sbjct: 198 NEQAAETAWKALVNEDRLLARIESLEAQLSILSSNNNNPDKQKEELLKMIDEKTKFEAKT 257
Query: 425 EQL 433
+++
Sbjct: 258 KEM 260
>U97593-6|AAB52879.2| 925|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 22,
isoform c protein.
Length = 925
Score = 27.5 bits (58), Expect = 8.5
Identities = 10/32 (31%), Positives = 21/32 (65%)
Frame = +2
Query: 503 YDLADTELKKELCVTESNKKMLIDRCQSAWEK 598
+++ +E+ KE +TE N + +D+ + AWE+
Sbjct: 346 WNIQQSEVDKETYITEPNWRRNVDQRRLAWER 377
>AC024810-9|AAF60766.1| 547|Caenorhabditis elegans Hypothetical
protein Y54E10A.12 protein.
Length = 547
Score = 27.5 bits (58), Expect = 8.5
Identities = 19/88 (21%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Frame = +2
Query: 311 ARVYEIEQWKSTLQELLDRIDREMGSLKEEKASTERELEQL--NLPLLVCSECLSNRDGR 484
A + +I + + L +LL + SLKEEKAS E+ L + + + + +
Sbjct: 116 ATIQKIAEKEKNLSKLLKELSIVDSSLKEEKASFEKTQSALLKEKGKIEKDKLMLREEAQ 175
Query: 485 RSSELTYDLADTELKKELCVTESNKKML 568
+ + + ++ EL+ + ++ NK+ +
Sbjct: 176 KQASMNAEVQKKELESQERLSVLNKQFM 203
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,089,401
Number of Sequences: 27780
Number of extensions: 301219
Number of successful extensions: 1152
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 1075
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1152
length of database: 12,740,198
effective HSP length: 78
effective length of database: 10,573,358
effective search space used: 1406256614
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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