Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4d11
         (514 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain tran...    23   1.6  
AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory recept...    23   1.6  
AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia or...    23   1.6  
AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia or...    23   1.6  
AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc fin...    23   2.1  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    22   3.7  
AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory recept...    22   3.7  
AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.         21   4.9  
AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory recept...    21   4.9  

>AY043293-1|AAK96033.1|  523|Tribolium castaneum homeodomain
           transcription factor Maxillopediaprotein.
          Length = 523

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 183 RNCCLGCQGPMSGPCG 230
           +  C GC+ P +G CG
Sbjct: 98  KKSCQGCEMPSAGLCG 113


>AM292357-1|CAL23169.2|  355|Tribolium castaneum gustatory receptor
           candidate 36 protein.
          Length = 355

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 10/31 (32%), Positives = 15/31 (48%)
 Frame = +1

Query: 112 YRNCPSFRI*NQLEVNRRNWTCLYVIAVWVV 204
           Y N   F + +QL    + WT L ++  W V
Sbjct: 26  YYNFEKFSLEHQLWQKIQAWTYLILLTTWTV 56


>AF187069-1|AAF03889.1|  471|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 471

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 183 RNCCLGCQGPMSGPCG 230
           +  C GC+ P +G CG
Sbjct: 46  KKSCQGCEMPSAGLCG 61


>AF187068-1|AAF03888.1|  477|Tribolium castaneum proboscipedia
           ortholog protein.
          Length = 477

 Score = 23.0 bits (47), Expect = 1.6
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = +3

Query: 183 RNCCLGCQGPMSGPCG 230
           +  C GC+ P +G CG
Sbjct: 229 KKSCQGCEMPSAGLCG 244


>AY316682-1|AAQ83696.1|  456|Tribolium castaneum Sp-like zinc finger
           protein protein.
          Length = 456

 Score = 22.6 bits (46), Expect = 2.1
 Identities = 13/45 (28%), Positives = 24/45 (53%), Gaps = 4/45 (8%)
 Frame = -3

Query: 434 PWTTARSAEPSSAASDTAVP---TAVVRAGYSS-TVAVHISALPT 312
           PW  +    PS +++ +++P   T+     YSS +V    S++PT
Sbjct: 66  PWKKSPQGAPSPSSTPSSLPTQRTSTSNPTYSSRSVMTSCSSVPT 110


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = -3

Query: 506 LFKKYTLFNFD-SIHISFALHYLCAPW 429
           L+K   +  F  S H SF   +LC P+
Sbjct: 58  LYKLLGIIQFPISAHFSFMSRFLCLPF 84


>AM292335-1|CAL23147.2|  374|Tribolium castaneum gustatory receptor
           candidate 14 protein.
          Length = 374

 Score = 21.8 bits (44), Expect = 3.7
 Identities = 10/27 (37%), Positives = 14/27 (51%), Gaps = 1/27 (3%)
 Frame = -3

Query: 506 LFKKYTLFNFD-SIHISFALHYLCAPW 429
           L+K   +  F  S H SF   +LC P+
Sbjct: 14  LYKLLGIIQFPISAHFSFMSRFLCLPF 40


>AY531877-1|AAT08872.1|  247|Tribolium castaneum ORF1p protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 7/13 (53%), Positives = 9/13 (69%)
 Frame = -2

Query: 273 RDQLDRSNPFYRP 235
           R+   R NP+YRP
Sbjct: 223 REDQTRRNPYYRP 235


>AM292381-1|CAL23193.2|  364|Tribolium castaneum gustatory receptor
           candidate 60 protein.
          Length = 364

 Score = 21.4 bits (43), Expect = 4.9
 Identities = 10/21 (47%), Positives = 12/21 (57%)
 Frame = -3

Query: 500 KKYTLFNFDSIHISFALHYLC 438
           K  +LF FD I +SF    LC
Sbjct: 141 KNASLFIFDLIFLSFRCTKLC 161


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 110,243
Number of Sequences: 336
Number of extensions: 2241
Number of successful extensions: 9
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 53
effective length of database: 104,777
effective search space used: 12258909
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)