Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4d07
         (722 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.       22   5.8  
AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory recept...    22   5.8  
AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory recept...    22   5.8  
U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu protein.    21   7.6  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   7.6  
AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain tran...    21   7.6  
AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.           21   7.6  

>U09586-3|AAC47272.1|  470|Tribolium castaneum integrase protein.
          Length = 470

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 8/29 (27%), Positives = 16/29 (55%)
 Frame = +1

Query: 22  FVYIFWKNSLIHHSVKITYAAVQRTNGNP 108
           F+   W+NSL    ++ T ++++    NP
Sbjct: 268 FISNTWQNSLRAADIQPTLSSIRHPESNP 296


>AM292376-1|CAL23188.2|  402|Tribolium castaneum gustatory receptor
           candidate 55 protein.
          Length = 402

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = -1

Query: 599 IPASDLSCSLLCRFHSRINSPLLLVDSSC---VLCYHSLCFFHLLLELFY 459
           IP    +  +LCR H ++ S +  ++S+    +L    +  F +L + +Y
Sbjct: 223 IPQISDNLYILCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDVLFQAYY 272


>AM292332-1|CAL23144.2|  344|Tribolium castaneum gustatory receptor
           candidate 11 protein.
          Length = 344

 Score = 21.8 bits (44), Expect = 5.8
 Identities = 12/50 (24%), Positives = 25/50 (50%), Gaps = 3/50 (6%)
 Frame = -1

Query: 599 IPASDLSCSLLCRFHSRINSPLLLVDSSC---VLCYHSLCFFHLLLELFY 459
           IP    +  +LCR H ++ S +  ++S+    +L    +  F +L + +Y
Sbjct: 223 IPQISDNLYILCRLHYKLTSVMQKINSAFSVQLLVSIGVSLFDVLFQAYY 272


>U14732-1|AAC46491.1|  322|Tribolium castaneum fushi-tarazu
          protein.
          Length = 322

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 68 FTEWWIKEFFQKMYTN 21
          F+++W   F+Q   TN
Sbjct: 7  FSDYWTNSFYQNYKTN 22


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 8/19 (42%), Positives = 12/19 (63%)
 Frame = +1

Query: 19  LFVYIFWKNSLIHHSVKIT 75
           + VYI    +L+HH V +T
Sbjct: 254 IIVYILIAKTLMHHPVAMT 272


>AY043292-2|AAK96032.1|  290|Tribolium castaneum homeodomain
          transcription factor Fushitarazu protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 68 FTEWWIKEFFQKMYTN 21
          F+++W   F+Q   TN
Sbjct: 7  FSDYWTNSFYQNYKTN 22


>AF321227-1|AAK16421.1|  290|Tribolium castaneum Ftz protein.
          Length = 290

 Score = 21.4 bits (43), Expect = 7.6
 Identities = 6/16 (37%), Positives = 10/16 (62%)
 Frame = -1

Query: 68 FTEWWIKEFFQKMYTN 21
          F+++W   F+Q   TN
Sbjct: 7  FSDYWTNSFYQNYKTN 22


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 126,313
Number of Sequences: 336
Number of extensions: 2302
Number of successful extensions: 11
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 11
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 55
effective length of database: 104,105
effective search space used: 19259425
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)