Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4d05
         (757 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.    25   0.49 
AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.    25   0.49 
U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic pr...    23   2.0  
DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome ad...    22   6.1  
AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    21   8.0  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    21   8.0  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    21   8.0  

>AY884062-1|AAX84203.1|  712|Tribolium castaneum laccase 2B protein.
          Length = 712

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +3

Query: 174 LTSTDGDPIRAITVDKFVSFLNLKKYQPIPN*FIINSRKT 293
           L +TDG+P+  + V+  +SF   ++Y      F+IN+ +T
Sbjct: 369 LIATDGEPVHPVRVNTIISFSG-ERYD-----FVINADQT 402


>AY884061-1|AAX84202.1|  717|Tribolium castaneum laccase 2A protein.
          Length = 717

 Score = 25.4 bits (53), Expect = 0.49
 Identities = 13/40 (32%), Positives = 24/40 (60%)
 Frame = +3

Query: 174 LTSTDGDPIRAITVDKFVSFLNLKKYQPIPN*FIINSRKT 293
           L +TDG+P+  + V+  +SF   ++Y      F+IN+ +T
Sbjct: 369 LIATDGEPVHPVRVNTIISFSG-ERYD-----FVINADQT 402


>U63132-1|AAB38392.1|  372|Tribolium castaneum decapentaplegic
           protein protein.
          Length = 372

 Score = 23.4 bits (48), Expect = 2.0
 Identities = 9/34 (26%), Positives = 19/34 (55%)
 Frame = -1

Query: 622 HGHLHHVAFHVSPLPRMVQRSLLQLFLVRQFLEN 521
           H H   + F++S +PR  + +  ++ L R+  +N
Sbjct: 101 HPHRFRLKFNISSIPRHEKLTAAEIKLTRETAKN 134


>DQ157471-1|AAZ85125.1| 1639|Tribolium castaneum Down Syndrome
           adhesion molecule splicevariant 3.12.3.1 protein.
          Length = 1639

 Score = 21.8 bits (44), Expect = 6.1
 Identities = 10/23 (43%), Positives = 14/23 (60%)
 Frame = +1

Query: 604 RDANVRGDGNVFYESFVESLFSV 672
           RD NVR   N +YE+ V S + +
Sbjct: 113 RDVNVRAVVNQYYEAEVVSEYVI 135


>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 7/15 (46%), Positives = 11/15 (73%)
 Frame = +1

Query: 352 YPSYAEVMNEVERLK 396
           YPSY + + + +RLK
Sbjct: 23  YPSYLQTVGKCQRLK 37


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/31 (29%), Positives = 16/31 (51%)
 Frame = -3

Query: 107  GYILKRIISIENCHCVEKIITINFRSLLTKK 15
            GY +  I  + + HCVE +  I  R ++  +
Sbjct: 1244 GYFIGLITFVMSQHCVELVSMIKARFVVVNQ 1274


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.4 bits (43), Expect = 8.0
 Identities = 9/28 (32%), Positives = 12/28 (42%)
 Frame = -1

Query: 673 QR*IGFQQNFHKIHFHRHGHLHHVAFHV 590
           QR    QQN +    +   H HH   H+
Sbjct: 303 QRQAAQQQNNNNAATNNQNHHHHAGHHI 330


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,717
Number of Sequences: 336
Number of extensions: 3420
Number of successful extensions: 9
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 20234955
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)