Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4d04
         (690 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U61953-13|AAO91705.1|  219|Caenorhabditis elegans Hypothetical p...   163   8e-41
U61953-12|AAC48073.1|  348|Caenorhabditis elegans Hypothetical p...   163   8e-41
Z68161-2|CAA92297.1|  361|Caenorhabditis elegans Hypothetical pr...   124   8e-29
Z67738-1|CAA91545.2|  352|Caenorhabditis elegans Hypothetical pr...    33   0.25 
AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical ...    29   2.4  
AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical ...    29   2.4  
U88168-8|ABC71818.1|  358|Caenorhabditis elegans Hypothetical pr...    28   5.5  
AC006830-6|AAK68608.1|  186|Caenorhabditis elegans Hypothetical ...    28   5.5  
Z73906-1|CAA98114.1|  540|Caenorhabditis elegans Hypothetical pr...    27   9.6  

>U61953-13|AAO91705.1|  219|Caenorhabditis elegans Hypothetical
           protein R08C7.2b protein.
          Length = 219

 Score =  163 bits (397), Expect = 8e-41
 Identities = 87/171 (50%), Positives = 102/171 (59%)
 Frame = +3

Query: 168 QNVKSRRPAESAFKQQRLPAWQPILTAGTVLPTFFVIGIAFIPVGIGLLYFSDEVKEHVI 347
           + V   RP  SA +QQ+LPAWQPILTA TV+PT FVIG  F+P+G+ L   SD V E  +
Sbjct: 24  EKVLKNRPKASALRQQKLPAWQPILTATTVIPTVFVIGAIFLPIGVFLFIASDAVSEFTV 83

Query: 348 DYTYCMKDDMNVTCADFLKNNTEEICTCHLPFNLTEDFKGEVYFYYGLTNYYQNHRRYVK 527
           +YT C+                     C L  NL   F G+V+ YY L NYYQNHRRYVK
Sbjct: 84  EYTNCLSP-------------------CQLQINLPNAFDGDVFLYYNLENYYQNHRRYVK 124

Query: 528 SRDDNQLLGRLSLTPSSDCDPFARAEENGVMKPIAPCGAIANSLFNDTLTL 680
           SR+D Q LG   LT   DC PF    +    KPIAPCGAIANS+FNDT TL
Sbjct: 125 SRNDQQYLG--DLTNVKDCAPF--DIDPATKKPIAPCGAIANSIFNDTFTL 171


>U61953-12|AAC48073.1|  348|Caenorhabditis elegans Hypothetical
           protein R08C7.2a protein.
          Length = 348

 Score =  163 bits (397), Expect = 8e-41
 Identities = 87/171 (50%), Positives = 102/171 (59%)
 Frame = +3

Query: 168 QNVKSRRPAESAFKQQRLPAWQPILTAGTVLPTFFVIGIAFIPVGIGLLYFSDEVKEHVI 347
           + V   RP  SA +QQ+LPAWQPILTA TV+PT FVIG  F+P+G+ L   SD V E  +
Sbjct: 24  EKVLKNRPKASALRQQKLPAWQPILTATTVIPTVFVIGAIFLPIGVFLFIASDAVSEFTV 83

Query: 348 DYTYCMKDDMNVTCADFLKNNTEEICTCHLPFNLTEDFKGEVYFYYGLTNYYQNHRRYVK 527
           +YT C+                     C L  NL   F G+V+ YY L NYYQNHRRYVK
Sbjct: 84  EYTNCLSP-------------------CQLQINLPNAFDGDVFLYYNLENYYQNHRRYVK 124

Query: 528 SRDDNQLLGRLSLTPSSDCDPFARAEENGVMKPIAPCGAIANSLFNDTLTL 680
           SR+D Q LG   LT   DC PF    +    KPIAPCGAIANS+FNDT TL
Sbjct: 125 SRNDQQYLG--DLTNVKDCAPF--DIDPATKKPIAPCGAIANSIFNDTFTL 171


>Z68161-2|CAA92297.1|  361|Caenorhabditis elegans Hypothetical
           protein F20C5.4 protein.
          Length = 361

 Score =  124 bits (298), Expect = 8e-29
 Identities = 61/168 (36%), Positives = 90/168 (53%)
 Frame = +3

Query: 177 KSRRPAESAFKQQRLPAWQPILTAGTVLPTFFVIGIAFIPVGIGLLYFSDEVKEHVIDYT 356
           K  +P ++ +KQQ+LPA +P     + +P   + G+A + +GI L +  +   E  I YT
Sbjct: 14  KKNQPKDTPWKQQKLPALRPHYNITSAIPVTLITGVATLAMGIALYFGHNGSLEQEIVYT 73

Query: 357 YCMKDDMNVTCADFLKNNTEEICTCHLPFNLTEDFKGEVYFYYGLTNYYQNHRRYVKSRD 536
            C   +              +   C     L +D+ GEV FYYGL+ +YQN+R Y  SR+
Sbjct: 74  DCALSNGTQASRIMRTEMGNQTFKCAYTITLNDDYTGEVKFYYGLSKFYQNNRLYFNSRN 133

Query: 537 DNQLLGRLSLTPSSDCDPFARAEENGVMKPIAPCGAIANSLFNDTLTL 680
           D QL G+  +T +  CDP    + NG   PIAPCG +A+S+FNDT  L
Sbjct: 134 DQQLRGK--VTETDGCDPLEYVDVNGTKVPIAPCGKVADSMFNDTFEL 179


>Z67738-1|CAA91545.2|  352|Caenorhabditis elegans Hypothetical
           protein W03G11.2 protein.
          Length = 352

 Score = 32.7 bits (71), Expect = 0.25
 Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 18/112 (16%)
 Frame = +3

Query: 399 LKNNTEEICTCHLPFNLTEDFKGEVYFYYGLTNYYQNHRRYVKSRDDNQLLGRLSLTPSS 578
           +++  + +   ++  N+T      VYFYY L + +  HR   ++    QL+       S+
Sbjct: 75  IRHRYDNVAEGYIDINITRFIPSPVYFYYELHDTFMMHRSLNQAYCKKQLI----TGESN 130

Query: 579 DCDPFARAE---ENGV---------------MKPIAPCGAIANSLFNDTLTL 680
           +CD F       EN V                K  AP G  A+ +FND+ +L
Sbjct: 131 ECDSFKNQNYSCENAVSRSFIPKMAMFCVDNQKYYAPVGGAASIMFNDSFSL 182


>AL031635-9|CAH04762.1| 1136|Caenorhabditis elegans Hypothetical
           protein Y47D3B.5b protein.
          Length = 1136

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +3

Query: 321 SDEVKEHVIDYTYCMKDDMNVTCADFL-KNNTE-EICTCHLPFNLTEDFKGE 470
           S++ ++ + D T    D M+   A    K NTE  +C C LP   T +FK +
Sbjct: 559 SNDFRDSISDATSLPMDSMSSPVAKKRNKRNTECAVCQCDLPMGNTAEFKAD 610


>AL031635-8|CAA21041.2| 1088|Caenorhabditis elegans Hypothetical
           protein Y47D3B.5a protein.
          Length = 1088

 Score = 29.5 bits (63), Expect = 2.4
 Identities = 17/52 (32%), Positives = 26/52 (50%), Gaps = 2/52 (3%)
 Frame = +3

Query: 321 SDEVKEHVIDYTYCMKDDMNVTCADFL-KNNTE-EICTCHLPFNLTEDFKGE 470
           S++ ++ + D T    D M+   A    K NTE  +C C LP   T +FK +
Sbjct: 559 SNDFRDSISDATSLPMDSMSSPVAKKRNKRNTECAVCQCDLPMGNTAEFKAD 610


>U88168-8|ABC71818.1|  358|Caenorhabditis elegans Hypothetical
           protein K11H12.11 protein.
          Length = 358

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 18/56 (32%), Positives = 26/56 (46%), Gaps = 3/56 (5%)
 Frame = +3

Query: 519 YVKSRDDNQLLGRLSLTPSSDCDPFARA---EENGVMKPIAPCGAIANSLFNDTLT 677
           Y+ S DDNQLL  + LT  S   P  +      +G  K I   G++  +  N+  T
Sbjct: 45  YLASGDDNQLLKNIQLTTGSTTIPLDQLNVFNNDGTPKFITATGSVILTTSNNATT 100


>AC006830-6|AAK68608.1|  186|Caenorhabditis elegans Hypothetical
           protein ZK105.1 protein.
          Length = 186

 Score = 28.3 bits (60), Expect = 5.5
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 294 PVGIGLLYFSDEVKEHVIDYTYCMKDDMNVTC 389
           P+ IG+   +DE+ E +     CMK D+  TC
Sbjct: 130 PMSIGIPDMNDEICEKIFKRKDCMKKDIVKTC 161


>Z73906-1|CAA98114.1|  540|Caenorhabditis elegans Hypothetical
           protein D2030.1 protein.
          Length = 540

 Score = 27.5 bits (58), Expect = 9.6
 Identities = 24/102 (23%), Positives = 45/102 (44%), Gaps = 5/102 (4%)
 Frame = +3

Query: 231 QPILTAGTV-LPTFFVIGIAFIPVGIGLLYFSDEVKEHVIDYTYCMKDDMNVTCADFLKN 407
           Q ++  G + L T  +    F+P G   LYF +E   HV D    +++++     D L+ 
Sbjct: 8   QLVVCVGVMFLLTVCITAFFFLPSGGADLYFREENSVHVRD--VLIREEIRRKEQDELRR 65

Query: 408 NTEEICTCHLP---FNLTEDFKGEVYFYYGLTNY-YQNHRRY 521
             EE     +P      ++D +G   F   +  + +  +R+Y
Sbjct: 66  KAEEANPIPIPKPEIGASDDAEGRRIFVKQMIKFAWDGYRKY 107


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,831,064
Number of Sequences: 27780
Number of extensions: 302582
Number of successful extensions: 765
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1581836700
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)