Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= bmte4d01
(523 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0737 - 31328473-31330513,31331015-31331184 118 2e-27
08_01_0471 - 4147170-4149207,4150535-4150692 110 8e-25
04_04_1339 + 32760424-32760584,32762428-32764462 106 9e-24
04_04_1337 + 32737051-32737202,32737314-32737809 65 4e-11
03_06_0221 + 32458867-32459149,32460271-32460386,32460461-324608... 58 4e-09
05_01_0355 - 2774217-2774318,2774608-2774775,2774872-2775090,277... 34 0.060
01_04_0017 - 15113479-15113580,15113950-15114117,15115011-151152... 34 0.060
01_05_0801 + 25353708-25353914,25354307-25354429,25355035-253552... 29 1.7
11_06_0458 + 23808402-23808469,23808800-23809684,23810011-238119... 29 2.3
01_06_0272 - 28065896-28065991,28066069-28066227,28066918-280669... 29 2.3
05_02_0021 - 5674587-5674799,5674898-5675031,5675129-5675207,567... 29 3.0
03_06_0060 + 31341233-31342009,31342752-31342871,31343401-313435... 28 5.2
04_04_0032 + 22291469-22291818,22292438-22292681,22292873-222930... 27 6.9
>02_05_0737 - 31328473-31330513,31331015-31331184
Length = 736
Score = 118 bits (285), Expect = 2e-27
Identities = 59/124 (47%), Positives = 79/124 (63%)
Frame = +2
Query: 152 PKDKIPGKMRIRAFPMTMDEKYVERIWSLLKNAIQEIQKKNNSGLSFEELYRNAYTMVLH 331
P K K+ + + +D KY ER W +L++AI EI N SGLSFEELYR+AY MVLH
Sbjct: 6 PPKKRNFKIELFKHRVELDPKYAERTWKVLEHAIHEIYNHNASGLSFEELYRSAYNMVLH 65
Query: 332 KHGERLYTGLXEVVTQHLETKVREDVLHSLHNGFLXTLNNAWTDHQTSMVMIRDILMYMD 511
K+GE+LY GL +T L+ ++ + + + FL LN W DH ++ MIRDILMYMD
Sbjct: 66 KYGEKLYDGLERTMTWRLK-EISKSIEAAQGGLFLEELNAKWMDHNKALQMIRDILMYMD 124
Query: 512 RVFV 523
R +V
Sbjct: 125 RTYV 128
>08_01_0471 - 4147170-4149207,4150535-4150692
Length = 731
Score = 110 bits (264), Expect = 8e-25
Identities = 55/121 (45%), Positives = 74/121 (61%)
Frame = +2
Query: 161 KIPGKMRIRAFPMTMDEKYVERIWSLLKNAIQEIQKKNNSGLSFEELYRNAYTMVLHKHG 340
K P ++ + D ++ E+ W L +AI+EI N SGLSFEELYR AY +VLHKHG
Sbjct: 5 KKPSRIEPFRHKVETDPRFFEKAWRKLDDAIREIYNHNASGLSFEELYRTAYNLVLHKHG 64
Query: 341 ERLYTGLXEVVTQHLETKVREDVLHSLHNGFLXTLNNAWTDHQTSMVMIRDILMYMDRVF 520
+LY L E + HL+ ++R + + FL L W DH ++ MIRDILMYMDRVF
Sbjct: 65 PKLYDKLTENMEDHLQ-EMRVSIEAAQGGLFLVELQRKWDDHNKALQMIRDILMYMDRVF 123
Query: 521 V 523
+
Sbjct: 124 I 124
>04_04_1339 + 32760424-32760584,32762428-32764462
Length = 731
Score = 106 bits (255), Expect = 9e-24
Identities = 56/108 (51%), Positives = 68/108 (62%), Gaps = 2/108 (1%)
Frame = +2
Query: 206 DEKYVERIWSLLKNAIQEIQKKNNSGLSFEELYRNAYTMVLHKHGERLYTGLXEVVTQHL 385
D K ++ W L++AI+EI N SGLSFEELYR AY +VLHKHG +LY L E + HL
Sbjct: 21 DPKSFDKSWKKLEDAIREIYNHNASGLSFEELYRTAYNLVLHKHGLKLYDKLTENLKGHL 80
Query: 386 ETKVR--EDVLHSLHNGFLXTLNNAWTDHQTSMVMIRDILMYMDRVFV 523
+ R ED SL FL L W DH ++ MIRDILMYMDR F+
Sbjct: 81 KEMCRSIEDAQGSL---FLEELQRRWADHNKALQMIRDILMYMDRTFI 125
>04_04_1337 + 32737051-32737202,32737314-32737809
Length = 215
Score = 64.9 bits (151), Expect = 4e-11
Identities = 35/112 (31%), Positives = 61/112 (54%), Gaps = 5/112 (4%)
Frame = +2
Query: 203 MDEKYVERIWSLLKNAIQEIQKKNNSGLSFEELYRNAYTMVLHKHGERLYTGLXEVVTQH 382
MD + +AI++I ++ L+FE+LYR Y +VL+KHGE +Y+ + +T
Sbjct: 17 MDAALAASSCQAVTDAIRDIYAQDMEKLNFEQLYRRVYEVVLNKHGELMYSEVATALTAE 76
Query: 383 LETKVREDVLHSLHNG-----FLXTLNNAWTDHQTSMVMIRDILMYMDRVFV 523
+E +R ++ G FL L + W H ++ +RD++MYM+R F+
Sbjct: 77 VE-GLRTSLVAVADGGGGGGAFLRELLSKWRRHTEAVAAVRDMVMYMERTFI 127
>03_06_0221 +
32458867-32459149,32460271-32460386,32460461-32460807,
32461231-32461411,32461507-32461629,32461828-32462115,
32462536-32462688,32463068-32463169,32463260-32463313,
32463518-32463624,32463867-32463927,32464019-32464150,
32464245-32464382,32464459-32464539,32464635-32464715,
32465133-32465213,32465300-32465413
Length = 813
Score = 58.0 bits (134), Expect = 4e-09
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 2/130 (1%)
Frame = +2
Query: 140 KSTLPKDKIPGK-MRIRAFPMTMDEKYVERIWSLLKNAIQEIQKKNNSGLSFEELYRNAY 316
K+TLP+ K +RI+ + + E W++LK+AI I K E+LY+ A
Sbjct: 77 KATLPQPSAARKPLRIKIGQPKLPTNFEEDTWAILKDAITAIFLKQKLSCDVEKLYQAAG 136
Query: 317 TMVLHKHGERLYTGLXEVVTQHLETKVREDVLHSLH-NGFLXTLNNAWTDHQTSMVMIRD 493
+ LHK G LY + + H+ K+ V S FL + W D M++IR
Sbjct: 137 DLCLHKLGANLYERIKKECEVHISAKISALVGQSPDLVVFLSLVQRTWQDFCDQMLIIRG 196
Query: 494 ILMYMDRVFV 523
I + +D +V
Sbjct: 197 IALLLDVKYV 206
>05_01_0355 -
2774217-2774318,2774608-2774775,2774872-2775090,
2775176-2775319,2775485-2775767,2775874-2775929,
2776012-2776161,2776254-2776340,2776414-2776449,
2777100-2777162,2777247-2777327,2777407-2777496,
2777690-2777767,2777855-2778058,2778139-2778186,
2778262-2778447,2779879-2779978,2780121-2780260
Length = 744
Score = 34.3 bits (75), Expect = 0.060
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 5/100 (5%)
Frame = +2
Query: 239 LKNAIQEIQKKNNSGLSFEELYRNAYTMVL----HKHGERLYTGLXEVVTQHLETKVRED 406
LKN ++ + S + LY Y M H + ++LY E +++ + V
Sbjct: 25 LKNILEGKPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYDKYRESFEEYITSMVLPS 84
Query: 407 VLHSLHNGF-LXTLNNAWTDHQTSMVMIRDILMYMDRVFV 523
L H+ F L L W++H+ + + Y+DR F+
Sbjct: 85 -LRDKHDEFMLRELVKRWSNHKIMVRWLSRFFFYLDRYFI 123
>01_04_0017 -
15113479-15113580,15113950-15114117,15115011-15115229,
15115303-15115446,15115558-15115840,15115936-15115991,
15116067-15116216,15116299-15116385,15116463-15116498,
15116746-15116808,15116887-15116967,15117053-15117142,
15117349-15117426,15117510-15117731,15117788-15117835,
15117948-15118133,15120910-15121009,15121107-15121246
Length = 750
Score = 34.3 bits (75), Expect = 0.060
Identities = 24/109 (22%), Positives = 49/109 (44%), Gaps = 5/109 (4%)
Frame = +2
Query: 212 KYVERIWSLLKNAIQEIQKKNNSGLSFEELYRNAYTMVL----HKHGERLYTGLXEVVTQ 379
+++++ + LKN ++ + S + LY Y M H + ++LY E +
Sbjct: 16 EFMQKGITKLKNILEGKPEPQFSSEDYMMLYTTIYNMCTQKPPHDYSQQLYEKYRESFEE 75
Query: 380 HLETKVREDVLHSLHNGF-LXTLNNAWTDHQTSMVMIRDILMYMDRVFV 523
++ + V L H+ F L L W++H+ + + Y+DR F+
Sbjct: 76 YITSMVLPS-LREKHDEFMLRELVKRWSNHKVMVRWLSRFFHYLDRYFI 123
>01_05_0801 +
25353708-25353914,25354307-25354429,25355035-25355205,
25355303-25355392,25355497-25355583,25355664-25355719,
25355812-25355905,25356032-25356144,25356211-25356283,
25356603-25356683,25356865-25356951,25357031-25357135,
25357279-25357385,25357481-25357541,25357931-25358158,
25359720-25360677,25360816-25360997,25361237-25361326,
25361422-25361709,25361844-25362056,25362560-25362784
Length = 1212
Score = 29.5 bits (63), Expect = 1.7
Identities = 12/36 (33%), Positives = 21/36 (58%)
Frame = -2
Query: 297 SSNDSPELFFFCISCMAFFNKLHIRSTYFSSIVIGK 190
S P + F C+ C+ FFN H+ +TY + ++G+
Sbjct: 508 SQQTCPVICFACLMCLRFFNS-HLLATYETEELMGE 542
>11_06_0458 +
23808402-23808469,23808800-23809684,23810011-23811961,
23812210-23812285,23813064-23813072,23813243-23813335,
23813578-23813581,23813780-23814703,23814926-23815909,
23816073-23816118,23816376-23816951,23817253-23817798,
23817820-23818416
Length = 2252
Score = 29.1 bits (62), Expect = 2.3
Identities = 23/66 (34%), Positives = 26/66 (39%)
Frame = -2
Query: 465 WSVHALLRVXKKPLCNECNTSSRTLVSRC*VTTSXRPVYSLSPCLCSTIVYALR*SSSND 286
WS A + L N C SR VTT V C +VY LR S +D
Sbjct: 327 WSAQAWKTIRYSLLENNCG-------SRILVTTRIGTVAKSCSSPCLNLVYELRVLSEDD 379
Query: 285 SPELFF 268
S LFF
Sbjct: 380 SKRLFF 385
>01_06_0272 -
28065896-28065991,28066069-28066227,28066918-28066966,
28067350-28067474,28067834-28068004,28068222-28068571,
28069322-28069478
Length = 368
Score = 29.1 bits (62), Expect = 2.3
Identities = 24/86 (27%), Positives = 43/86 (50%), Gaps = 9/86 (10%)
Frame = +2
Query: 221 ERIWSLLKNAIQEIQKKNNSGLSFEELYR---NAYTMVLHKHGERLYTGLXEV-VTQ-HL 385
E+ +S + + +++++ K+ EE Y N++ L H E L ++ V+Q HL
Sbjct: 242 EKQYSEISSEMKDLEIKSKEFEELEERYWHEFNSFQFQLTSHQEERDAILAKIEVSQVHL 301
Query: 386 E----TKVREDVLHSLHNGFLXTLNN 451
E T V D + H+G + T+NN
Sbjct: 302 ELLKQTNVLNDAFYISHDGVIGTINN 327
>05_02_0021 -
5674587-5674799,5674898-5675031,5675129-5675207,
5675737-5675799,5676420-5676482,5676557-5676673,
5676756-5676803,5676918-5677103,5677948-5678047,
5678323-5678562,5678583-5678686
Length = 448
Score = 28.7 bits (61), Expect = 3.0
Identities = 23/89 (25%), Positives = 40/89 (44%), Gaps = 8/89 (8%)
Frame = +2
Query: 281 GLSFEELYRNAYTMVL-------HK-HGERLYTGLXEVVTQHLETKVREDVLHSLHNGFL 436
G S +E Y + YT+V HK + + LY + + HL++ V + N L
Sbjct: 104 GFSPDE-YMHIYTLVYYMCTQKGHKDYPKELYHLCKQALDDHLDSIVLPSLNEKHGNFLL 162
Query: 437 XTLNNAWTDHQTSMVMIRDILMYMDRVFV 523
+ +W H+ + +R Y+DRV +
Sbjct: 163 AEMLQSWEKHKLMVRWLRRFFDYLDRVSI 191
>03_06_0060 +
31341233-31342009,31342752-31342871,31343401-31343517,
31343615-31343704,31344279-31344386,31345124-31345306
Length = 464
Score = 27.9 bits (59), Expect = 5.2
Identities = 11/33 (33%), Positives = 17/33 (51%)
Frame = +3
Query: 270 KTTLDYHLKSFTVMHIQWYCTNMEKDYTLASXK 368
K ++ L+ H+QW C N + D LA+ K
Sbjct: 223 KVDCEHLLRILCNRHLQWRCVNAQADAALAAQK 255
>04_04_0032 +
22291469-22291818,22292438-22292681,22292873-22293052,
22293843-22294070
Length = 333
Score = 27.5 bits (58), Expect = 6.9
Identities = 12/35 (34%), Positives = 18/35 (51%)
Frame = +3
Query: 324 YCTNMEKDYTLASXK*SLNILKLRSEKMYCIHYTM 428
+CT D L S + SL L++ MY +H+ M
Sbjct: 99 WCTQCHPDLVLPSLRESLQNLQMEYVDMYLVHWPM 133
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,766,214
Number of Sequences: 37544
Number of extensions: 246788
Number of successful extensions: 594
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 579
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 589
length of database: 14,793,348
effective HSP length: 77
effective length of database: 11,902,460
effective search space used: 1142636160
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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