Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4d01
         (523 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodi...    25   2.0  
AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family prote...    23   6.2  
AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.    23   8.2  

>AM422833-1|CAM12801.1| 2139|Anopheles gambiae voltage-gated sodium
            channel alpha subunitprotein.
          Length = 2139

 Score = 24.6 bits (51), Expect = 2.0
 Identities = 9/19 (47%), Positives = 13/19 (68%)
 Frame = +2

Query: 464  HQTSMVMIRDILMYMDRVF 520
            H     +++DIL YMDR+F
Sbjct: 1328 HLPQRPILQDILYYMDRIF 1346


>AB107248-1|BAE72063.1|  278|Anopheles gambiae Bcl-2 family protein
           Anob-1 protein.
          Length = 278

 Score = 23.0 bits (47), Expect = 6.2
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 104 CWCKKYIKAPMMKSTLPKDKIPGKMR 181
           C C +YI+A + +S L   KI  ++R
Sbjct: 70  CLCGEYIRARLKRSGLLNRKILQRLR 95


>AF457565-1|AAL68795.1|  391|Anopheles gambiae TRIO protein protein.
          Length = 391

 Score = 22.6 bits (46), Expect = 8.2
 Identities = 14/63 (22%), Positives = 32/63 (50%)
 Frame = +2

Query: 293 EELYRNAYTMVLHKHGERLYTGLXEVVTQHLETKVREDVLHSLHNGFLXTLNNAWTDHQT 472
           EEL + A+ + +HK    +Y  + ++V        +  +L +LH   L T+ N   +++ 
Sbjct: 184 EELLKYAWALPMHKKQRSMYDLIGQLVQSS-----KSPMLQTLHAVELATVVNPELENRE 238

Query: 473 SMV 481
           +++
Sbjct: 239 NLL 241


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 548,866
Number of Sequences: 2352
Number of extensions: 11170
Number of successful extensions: 20
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 563,979
effective HSP length: 60
effective length of database: 422,859
effective search space used: 47783067
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)