Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= bmte4c24
         (706 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_A3TIN6 Cluster: Probable solute-binding lipoprotein; n=...    34   3.0  
UniRef50_Q9VSY0 Cluster: CG3672-PA; n=2; Sophophora|Rep: CG3672-...    33   9.0  
UniRef50_Q08I39 Cluster: Putative uncharacterized protein rom-4;...    33   9.0  

>UniRef50_A3TIN6 Cluster: Probable solute-binding lipoprotein; n=1;
           Janibacter sp. HTCC2649|Rep: Probable solute-binding
           lipoprotein - Janibacter sp. HTCC2649
          Length = 445

 Score = 34.3 bits (75), Expect = 3.0
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
 Frame = -2

Query: 207 VGWI-SSWCRSSLQITLQDDTGDWVGETVEEAPWWTG 100
           +G++ +SWC   L+ T+ D TG W    V E P W G
Sbjct: 274 IGYVCASWCAGGLKATVPDQTGKW---AVAELPSWDG 307


>UniRef50_Q9VSY0 Cluster: CG3672-PA; n=2; Sophophora|Rep: CG3672-PA
           - Drosophila melanogaster (Fruit fly)
          Length = 260

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 18/48 (37%), Positives = 24/48 (50%)
 Frame = +1

Query: 1   ENDGSYNPNQGSYQTGQGFTGKPLNEKYEEPEPTGPPRGFFYSFTYPV 144
           + +G Y P +  YQ       +P       PE TG P+GFFY+F Y V
Sbjct: 194 QQEGRYQPTEPEYQPY--VHEEP--PYVPGPEETGEPKGFFYAFDYNV 237


>UniRef50_Q08I39 Cluster: Putative uncharacterized protein rom-4;
           n=4; Caenorhabditis|Rep: Putative uncharacterized
           protein rom-4 - Caenorhabditis elegans
          Length = 982

 Score = 32.7 bits (71), Expect = 9.0
 Identities = 14/49 (28%), Positives = 22/49 (44%)
 Frame = -2

Query: 207 VGWISSWCRSSLQITLQDDTGDWVGETVEEAPWWTGWFGLFVFFI*RLS 61
           +G +  W   S +  L  +T   + E  +E PW+T W      F+  LS
Sbjct: 397 IGRVGQWMGRSYKDNLSKETRKMLAEGTDERPWFTYWITTIQIFVCLLS 445


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 638,564,053
Number of Sequences: 1657284
Number of extensions: 12692470
Number of successful extensions: 32765
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 31492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 32726
length of database: 575,637,011
effective HSP length: 98
effective length of database: 413,223,179
effective search space used: 56198352344
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)